RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ESM1Q9NQ30 184 aa8.96□□□□□ -0.98
NEK9-210ENST00000557026 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.95□□□□□ -0.98
NEK9-210ENST00000557026 IGHV4-28A0A0C4DH34 117 aa8.95□□□□□ -0.98
NEK9-210ENST00000557026 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
NEK9-210ENST00000557026 NCR3O14931 201 aa8.95□□□□□ -0.98
NEK9-210ENST00000557026 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
NEK9-210ENST00000557026 TRBV10-2A0A0K0K1G8 114 aa8.95□□□□□ -0.98
NEK9-210ENST00000557026 COX17Q14061 63 aa8.95□□□□□ -0.98
NEK9-210ENST00000557026 DEFB4AO15263 64 aa8.94□□□□□ -0.98
NEK9-210ENST00000557026 GTSF1Q8WW33 167 aa8.94□□□□□ -0.98
NEK9-210ENST00000557026 FSHBP01225 129 aa8.94□□□□□ -0.98
NEK9-210ENST00000557026 FAM19A1Q7Z5A9 133 aa8.94□□□□□ -0.98
NEK9-210ENST00000557026 MSRB1Q9NZV6 116 aa8.94□□□□□ -0.98
NEK9-210ENST00000557026 KMT2EQ8IZD2 1858 aa8.94□□□□□ -0.98
NEK9-210ENST00000557026 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
NEK9-210ENST00000557026 C11orf1Q9H5F2 150 aa8.94□□□□□ -0.98
NEK9-210ENST00000557026 ANKHD1Q8IWZ3 2542 aaKnown RBP8.93□□□□□ -0.98
NEK9-210ENST00000557026 NACAE9PAV3 2078 aa8.93□□□□□ -0.98
NEK9-210ENST00000557026 KIF26AQ9ULI4 1882 aaPredicted RBP8.93□□□□□ -0.98
NEK9-210ENST00000557026 TCL1BO95988 128 aa8.93□□□□□ -0.98
NEK9-210ENST00000557026 KPRPQ5T749 579 aaPredicted RBP8.93□□□□□ -0.98
NEK9-210ENST00000557026 CFAP126Q5VTH2 177 aa8.93□□□□□ -0.98
NEK9-210ENST00000557026 LECT2O14960 151 aa8.93□□□□□ -0.98
NEK9-210ENST00000557026 MED13Q9UHV7 2174 aa8.93□□□□□ -0.98
NEK9-210ENST00000557026 M0R378 163 aa8.92□□□□□ -0.98
NEK9-210ENST00000557026 EIF4EBP1Q13541 118 aaPredicted RBP8.92□□□□□ -0.98
NEK9-210ENST00000557026 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
NEK9-210ENST00000557026 ZFHX2Q9C0A1 2572 aaPredicted RBP8.92□□□□□ -0.98
NEK9-210ENST00000557026 RPL39P62891 51 aaKnown RBP8.92□□□□□ -0.98
NEK9-210ENST00000557026 Q6ZUT4 128 aa8.92□□□□□ -0.98
NEK9-210ENST00000557026 PLXNB3Q9ULL4 1909 aa8.92□□□□□ -0.98
NEK9-210ENST00000557026 TEN1Q86WV5 123 aa8.92□□□□□ -0.98
NEK9-210ENST00000557026 NEXN-AS1Q8NBZ9 246 aa8.92□□□□□ -0.98
NEK9-210ENST00000557026 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
NEK9-210ENST00000557026 H0Y9J4 135 aa8.91□□□□□ -0.98
NEK9-210ENST00000557026 TNRC6AQ8NDV7 1962 aaKnown RBP8.91□□□□□ -0.98
NEK9-210ENST00000557026 A0A1B0GXF2 115 aa8.91□□□□□ -0.98
NEK9-210ENST00000557026 H3BMG7 143 aa8.91□□□□□ -0.98
NEK9-210ENST00000557026 ODF1Q14990 250 aa8.91□□□□□ -0.98
NEK9-210ENST00000557026 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
NEK9-210ENST00000557026 E7EUB6 86 aa8.9□□□□□ -0.98
NEK9-210ENST00000557026 MLST8Q9BVC4 326 aa8.9□□□□□ -0.98
NEK9-210ENST00000557026 DYSFO75923 2080 aa8.9□□□□□ -0.99
NEK9-210ENST00000557026 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
NEK9-210ENST00000557026 BPY2O14599 106 aa8.89□□□□□ -0.99
NEK9-210ENST00000557026 COL5A1P20908 1838 aaPredicted RBP8.89□□□□□ -0.99
NEK9-210ENST00000557026 K7ERS5 55 aa8.89□□□□□ -0.99
NEK9-210ENST00000557026 OBSL1O75147 1896 aa8.89□□□□□ -0.99
NEK9-210ENST00000557026 DENND4CQ5VZ89 1909 aa8.89□□□□□ -0.99
NEK9-210ENST00000557026 KLLNB2CW77 178 aa8.89□□□□□ -0.99
NEK9-210ENST00000557026 DOCK11Q5JSL3 2073 aa8.88□□□□□ -0.99
NEK9-210ENST00000557026 G3V4G9 280 aa8.88□□□□□ -0.99
NEK9-210ENST00000557026 CDPF1Q6NVV7 123 aa8.88□□□□□ -0.99
NEK9-210ENST00000557026 CASC2Q6XLA1 102 aa8.88□□□□□ -0.99
NEK9-210ENST00000557026 PCP2Q8IVA1 136 aa8.88□□□□□ -0.99
NEK9-210ENST00000557026 RPL28P46779 137 aaKnown RBP8.88□□□□□ -0.99
NEK9-210ENST00000557026 TTC28Q96AY4 2481 aa8.88□□□□□ -0.99
NEK9-210ENST00000557026 M0QY20 66 aa8.88□□□□□ -0.99
NEK9-210ENST00000557026 IGKV2D-26A0A0A0MRZ7 120 aa8.87□□□□□ -0.99
NEK9-210ENST00000557026 LY6G6CO95867 125 aa8.87□□□□□ -0.99
NEK9-210ENST00000557026 IGLV1-51P01701 117 aa8.87□□□□□ -0.99
NEK9-210ENST00000557026 RBX1P62877 108 aa8.87□□□□□ -0.99
NEK9-210ENST00000557026 TRBV30A0A0K0K1B3 111 aa8.87□□□□□ -0.99
NEK9-210ENST00000557026 PTH2Q96A98 100 aa8.87□□□□□ -0.99
NEK9-210ENST00000557026 ZNF106Q9H2Y7 1883 aaKnown RBP8.87□□□□□ -0.99
NEK9-210ENST00000557026 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
NEK9-210ENST00000557026 LINC00467Q9BRT7 94 aa8.86□□□□□ -0.99
NEK9-210ENST00000557026 NOTCH3Q9UM47 2321 aa8.86□□□□□ -0.99
NEK9-210ENST00000557026 KIAA1549LQ6ZVL6 1849 aa8.86□□□□□ -0.99
NEK9-210ENST00000557026 U3KQK5 164 aa8.86□□□□□ -0.99
NEK9-210ENST00000557026 LINC00643Q86TS7 51 aa8.85□□□□□ -0.99
NEK9-210ENST00000557026 C9orf85Q96MD7 179 aa8.85□□□□□ -0.99
NEK9-210ENST00000557026 ADAMTS9Q9P2N4 1935 aa8.85□□□□□ -0.99
NEK9-210ENST00000557026 IGHV4-30-4P0DP06 118 aa8.85□□□□□ -0.99
NEK9-210ENST00000557026 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
NEK9-210ENST00000557026 WFDC9Q8NEX5 89 aa8.85□□□□□ -0.99
NEK9-210ENST00000557026 ANKRD39Q53RE8 183 aa8.84□□□□□ -0.99
NEK9-210ENST00000557026 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
NEK9-210ENST00000557026 CHD3Q12873 2000 aaKnown RBP8.84□□□□□ -0.99
NEK9-210ENST00000557026 EGFEM1PQ0D2K5 195 aa8.84□□□□□ -0.99
NEK9-210ENST00000557026 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
NEK9-210ENST00000557026 Q8IZM0 81 aa8.84□□□□□ -0.99
NEK9-210ENST00000557026 NUP210LQ5VU65 1888 aa8.84□□□□□ -0.99
NEK9-210ENST00000557026 LINC01561Q8N1V8 128 aa8.84□□□□□ -1
NEK9-210ENST00000557026 K7ERJ3 54 aa8.83□□□□□ -1
NEK9-210ENST00000557026 BBC3Q96PG8 261 aaPredicted RBP8.83□□□□□ -1
NEK9-210ENST00000557026 TRAV23DV6A0A075B6W5 121 aa8.83□□□□□ -1
NEK9-210ENST00000557026 WISP2O76076 250 aa8.83□□□□□ -1
NEK9-210ENST00000557026 DSCAMO60469 2012 aa8.83□□□□□ -1
NEK9-210ENST00000557026 C20orf173Q96LM9 149 aa8.83□□□□□ -1
NEK9-210ENST00000557026 C14orf132Q9NPU4 83 aa8.83□□□□□ -1
NEK9-210ENST00000557026 ZNF80P51504 273 aaPredicted RBP8.82□□□□□ -1
NEK9-210ENST00000557026 IGKV4-1P06312 121 aa8.82□□□□□ -1
NEK9-210ENST00000557026 ASPHD1Q5U4P2 390 aa8.82□□□□□ -1
NEK9-210ENST00000557026 USP17L23D6RBM5 183 aa8.81□□□□□ -1
NEK9-210ENST00000557026 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
NEK9-210ENST00000557026 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.81□□□□□ -1
NEK9-210ENST00000557026 RNF185Q96GF1 192 aa8.81□□□□□ -1
NEK9-210ENST00000557026 PIEZO1Q92508 2521 aa8.81□□□□□ -1
NEK9-210ENST00000557026 CUL9Q8IWT3 2517 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms