RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 SPCS2Q15005 226 aa-2.69□□□□□ -2.84
LINC00648-203ENST00000556923 DEFB112Q30KQ8 113 aa-2.69□□□□□ -2.84
LINC00648-203ENST00000556923 SNX29P2Q8IUI4 249 aa-2.69□□□□□ -2.84
LINC00648-203ENST00000556923 BOLA2Q9H3K6 86 aa-2.69□□□□□ -2.84
LINC00648-203ENST00000556923 TRIOO75962 3097 aa-2.7□□□□□ -2.84
LINC00648-203ENST00000556923 TRAV12-3A0A0B4J271 114 aa-2.7□□□□□ -2.84
LINC00648-203ENST00000556923 RPL7P18124 248 aaKnown RBP-2.7□□□□□ -2.84
LINC00648-203ENST00000556923 DNAH5Q8TE73 4624 aa-2.71□□□□□ -2.84
LINC00648-203ENST00000556923 M0R2P5 195 aa-2.71□□□□□ -2.84
LINC00648-203ENST00000556923 PSPHP78330 225 aa-2.71□□□□□ -2.84
LINC00648-203ENST00000556923 WFDC6Q9BQY6 131 aa-2.71□□□□□ -2.84
LINC00648-203ENST00000556923 KDM5CP41229 1560 aa-2.71□□□□□ -2.84
LINC00648-203ENST00000556923 ZZEF1O43149 2961 aa-2.71□□□□□ -2.84
LINC00648-203ENST00000556923 FRYQ5TBA9 3013 aa-2.72□□□□□ -2.84
LINC00648-203ENST00000556923 EDDM3BP56851 147 aa-2.72□□□□□ -2.84
LINC00648-203ENST00000556923 NOP16Q9Y3C1 178 aaKnown RBP-2.72□□□□□ -2.84
LINC00648-203ENST00000556923 C5orf42Q9H799 3197 aa-2.72□□□□□ -2.85
LINC00648-203ENST00000556923 IFT172Q9UG01 1749 aa-2.73□□□□□ -2.85
LINC00648-203ENST00000556923 DNAH17Q9UFH2 4485 aa-2.73□□□□□ -2.85
LINC00648-203ENST00000556923 CHMP6Q96FZ7 201 aa-2.73□□□□□ -2.85
LINC00648-203ENST00000556923 KNL1Q8NG31 2342 aa-2.73□□□□□ -2.85
LINC00648-203ENST00000556923 PFDN1O60925 122 aa-2.74□□□□□ -2.85
LINC00648-203ENST00000556923 ATP6V0E2Q8NHE4 81 aa-2.74□□□□□ -2.85
LINC00648-203ENST00000556923 DNAJC15Q9Y5T4 150 aa-2.74□□□□□ -2.85
LINC00648-203ENST00000556923 UHRF1BP1LA0JNW5 1464 aa-2.74□□□□□ -2.85
LINC00648-203ENST00000556923 KDM3BQ7LBC6 1761 aa-2.74□□□□□ -2.85
LINC00648-203ENST00000556923 E7EQ34 232 aa-2.75□□□□□ -2.85
LINC00648-203ENST00000556923 HAMPP81172 84 aa-2.75□□□□□ -2.85
LINC00648-203ENST00000556923 Q5VV11 94 aa-2.75□□□□□ -2.85
LINC00648-203ENST00000556923 CCDC179H3BU77 68 aa-2.76□□□□□ -2.85
LINC00648-203ENST00000556923 BCE1O60756 84 aa-2.76□□□□□ -2.85
LINC00648-203ENST00000556923 DEFB135Q30KP9 77 aa-2.76□□□□□ -2.85
LINC00648-203ENST00000556923 TMEM91Q6ZNR0 172 aa-2.76□□□□□ -2.85
LINC00648-203ENST00000556923 CCDC115Q96NT0 180 aa-2.76□□□□□ -2.85
LINC00648-203ENST00000556923 REV3LO60673 3130 aa-2.77□□□□□ -2.85
LINC00648-203ENST00000556923 DNAJC13O75165 2243 aa-2.77□□□□□ -2.85
LINC00648-203ENST00000556923 SPENQ96T58 3664 aaKnown RBP-2.77□□□□□ -2.85
LINC00648-203ENST00000556923 MT1GP13640 62 aa-2.77□□□□□ -2.85
LINC00648-203ENST00000556923 MUC22E2RYF6 1773 aaPredicted RBP-2.77□□□□□ -2.85
LINC00648-203ENST00000556923 TSC2P49815 1807 aa-2.77□□□□□ -2.85
LINC00648-203ENST00000556923 MYO9AB2RTY4 2548 aa-2.78□□□□□ -2.85
LINC00648-203ENST00000556923 DEFB1P60022 68 aa-2.78□□□□□ -2.85
LINC00648-203ENST00000556923 SCN3BQ9NY72 215 aa-2.78□□□□□ -2.85
LINC00648-203ENST00000556923 DMXL2Q8TDJ6 3036 aa-2.78□□□□□ -2.85
LINC00648-203ENST00000556923 TRRAPQ9Y4A5 3859 aa-2.79□□□□□ -2.86
LINC00648-203ENST00000556923 GID8Q9NWU2 228 aa-2.79□□□□□ -2.86
LINC00648-203ENST00000556923 IBTKQ9P2D0 1353 aaPredicted RBP-2.79□□□□□ -2.86
LINC00648-203ENST00000556923 DNAH8Q96JB1 4490 aa-2.8□□□□□ -2.86
LINC00648-203ENST00000556923 ADGRG4Q8IZF6 3080 aa-2.8□□□□□ -2.86
LINC00648-203ENST00000556923 APOC4-APOC2K7ER74 178 aa-2.8□□□□□ -2.86
LINC00648-203ENST00000556923 NPFFO15130 113 aa-2.8□□□□□ -2.86
LINC00648-203ENST00000556923 ZNF609O15014 1411 aa-2.8□□□□□ -2.86
LINC00648-203ENST00000556923 TLN1Q9Y490 2541 aaKnown RBP-2.81□□□□□ -2.86
LINC00648-203ENST00000556923 FXYD6-FXYD2A0A087WZ82 144 aa-2.81□□□□□ -2.86
LINC00648-203ENST00000556923 ATP11AUNQ6ZP68 121 aa-2.81□□□□□ -2.86
LINC00648-203ENST00000556923 MT1MQ8N339 61 aa-2.81□□□□□ -2.86
LINC00648-203ENST00000556923 BORCS7-ASMTA0A0B4J1R7 106 aa-2.82□□□□□ -2.86
LINC00648-203ENST00000556923 DCDP81605 110 aaKnown RBP-2.82□□□□□ -2.86
LINC00648-203ENST00000556923 TRIQKQ629K1 86 aa-2.82□□□□□ -2.86
LINC00648-203ENST00000556923 TP53AIP1Q9HCN2 124 aa-2.82□□□□□ -2.86
LINC00648-203ENST00000556923 BOD1L1Q8NFC6 3051 aa-2.83□□□□□ -2.86
LINC00648-203ENST00000556923 TRANK1O15050 2925 aa-2.83□□□□□ -2.86
LINC00648-203ENST00000556923 XIRP1Q702N8 1843 aaKnown RBP-2.83□□□□□ -2.86
LINC00648-203ENST00000556923 TMEM238C9JI98 176 aa-2.83□□□□□ -2.86
LINC00648-203ENST00000556923 J3QLW9 94 aa-2.83□□□□□ -2.86
LINC00648-203ENST00000556923 RBP4P02753 201 aa-2.83□□□□□ -2.86
LINC00648-203ENST00000556923 AGPAT4-IT1Q9H0P7 198 aa-2.83□□□□□ -2.86
LINC00648-203ENST00000556923 MT2AP02795 61 aa-2.84□□□□□ -2.86
LINC00648-203ENST00000556923 CFAP126Q5VTH2 177 aa-2.84□□□□□ -2.86
LINC00648-203ENST00000556923 OR9Q1Q8NGQ5 310 aa-2.84□□□□□ -2.86
LINC00648-203ENST00000556923 NPVFQ9HCQ7 196 aa-2.84□□□□□ -2.86
LINC00648-203ENST00000556923 LRP6O75581 1613 aa-2.84□□□□□ -2.86
LINC00648-203ENST00000556923 CLPSL1A2RUU4 121 aa-2.85□□□□□ -2.87
LINC00648-203ENST00000556923 HLA-DRB4P13762 266 aa-2.85□□□□□ -2.87
LINC00648-203ENST00000556923 ATPIF1Q9UII2 106 aa-2.85□□□□□ -2.87
LINC00648-203ENST00000556923 HLA-DRB4X5D2U9 266 aa-2.85□□□□□ -2.87
LINC00648-203ENST00000556923 ATMQ13315 3056 aa-2.85□□□□□ -2.87
LINC00648-203ENST00000556923 ZFHX3Q15911 3703 aa-2.85□□□□□ -2.87
LINC00648-203ENST00000556923 CALML5Q9NZT1 146 aa-2.86□□□□□ -2.87
LINC00648-203ENST00000556923 LRBAP50851 2863 aa-2.86□□□□□ -2.87
LINC00648-203ENST00000556923 ROCK1Q13464 1354 aa-2.87□□□□□ -2.87
LINC00648-203ENST00000556923 H3BNG1 76 aa-2.87□□□□□ -2.87
LINC00648-203ENST00000556923 I3L2K1 104 aa-2.87□□□□□ -2.87
LINC00648-203ENST00000556923 K7EP34 96 aa-2.87□□□□□ -2.87
LINC00648-203ENST00000556923 DNAH10Q8IVF4 4471 aa-2.87□□□□□ -2.87
LINC00648-203ENST00000556923 MT-ND4LP03901 98 aa-2.88□□□□□ -2.87
LINC00648-203ENST00000556923 PAEPP09466 180 aa-2.88□□□□□ -2.87
LINC00648-203ENST00000556923 CLLU1Q5K131 121 aa-2.88□□□□□ -2.87
LINC00648-203ENST00000556923 BAGE3Q86Y29 109 aa-2.88□□□□□ -2.87
LINC00648-203ENST00000556923 MNS1Q8NEH6 495 aa-2.88□□□□□ -2.87
LINC00648-203ENST00000556923 NDUFA12Q9UI09 145 aa-2.88□□□□□ -2.87
LINC00648-203ENST00000556923 COL4A6Q14031 1691 aa-2.88□□□□□ -2.87
LINC00648-203ENST00000556923 OVOS2A0A0G2JMS6 1433 aa-2.89□□□□□ -2.87
LINC00648-203ENST00000556923 YPEL1O60688 119 aa-2.89□□□□□ -2.87
LINC00648-203ENST00000556923 SMIM24O75264 130 aa-2.89□□□□□ -2.87
LINC00648-203ENST00000556923 KRTAP19-5Q3LI72 72 aa-2.89□□□□□ -2.87
LINC00648-203ENST00000556923 BANF2Q9H503 90 aa-2.89□□□□□ -2.87
LINC00648-203ENST00000556923 MYO15AQ9UKN7 3530 aa-2.89□□□□□ -2.87
LINC00648-203ENST00000556923 ERCC6L2Q5T890 1561 aa-2.9□□□□□ -2.87
LINC00648-203ENST00000556923 TROQ12816 1431 aaPredicted RBP-2.9□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms