RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 Q6ZSA8 131 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 SLC51BQ86UW2 128 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 NUDT10Q8NFP7 164 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 DEFB104AQ8WTQ1 72 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 NUDT11Q96G61 164 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 CHAC1Q9BUX1 264 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 DPH3P1Q9H4G8 78 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 HSPG2P98160 4391 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 LRP1BQ9NZR2 4599 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 IGLV10-54A0A075B6I4 117 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 REG3AQ06141 175 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 IQCJQ1A5X6 159 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 SMIM15Q7Z3B0 74 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 TCTE3Q8IZS6 198 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 CIRBP-AS1Q8TBR5 109 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 DPH3Q96FX2 82 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 TMEM243Q9BU79 118 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 NIT2Q9NQR4 276 aa4.68□□□□□ -1.66
PCNX1-213ENST00000556846 PRSS1P07477 247 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 AMTP48728 403 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 CEBPGP53567 150 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 COTL1Q14019 142 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 DGAT2L7PQ6IED9 249 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 WDR73Q6P4I2 378 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 C9orf62Q8N4C0 152 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 RNASE7Q9H1E1 156 aaKnown RBP4.67□□□□□ -1.66
PCNX1-213ENST00000556846 RPP21Q9H633 154 aaKnown RBP4.67□□□□□ -1.66
PCNX1-213ENST00000556846 PRR34Q9NV39 138 aa4.67□□□□□ -1.66
PCNX1-213ENST00000556846 TRBV20OR9-2A0A075B6H5 130 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 TRAV8-4A0A0B4J246 113 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 IGKV3OR2-268A0A0C4DH90 116 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 hDV102S1A0JD36 115 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 BLOC1S1P78537 153 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 AMMECR1LQ6DCA0 310 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 AKAP14Q86UN6 197 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 CLRN3Q8NCR9 226 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 AP5S1Q9NUS5 200 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 DNAH5Q8TE73 4624 aa4.66□□□□□ -1.66
PCNX1-213ENST00000556846 hCG_2014768A0A024R1R8 64 aa4.65□□□□□ -1.67
PCNX1-213ENST00000556846 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.65□□□□□ -1.67
PCNX1-213ENST00000556846 TRAV26-2A0A0B4J265 109 aa4.65□□□□□ -1.67
PCNX1-213ENST00000556846 A0A1B0GUV1 79 aa4.65□□□□□ -1.67
PCNX1-213ENST00000556846 GATCO43716 136 aaKnown RBP4.65□□□□□ -1.67
PCNX1-213ENST00000556846 ALKAL2Q6UX46 152 aa4.65□□□□□ -1.67
PCNX1-213ENST00000556846 C20orf203Q8NBC4 194 aa4.65□□□□□ -1.67
PCNX1-213ENST00000556846 BORCS7Q96B45 105 aa4.65□□□□□ -1.67
PCNX1-213ENST00000556846 PGLYRP4Q96LB8 373 aa4.65□□□□□ -1.67
PCNX1-213ENST00000556846 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
PCNX1-213ENST00000556846 IGLV4-60A0A075B6I1 120 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 A8MWL6 223 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 K7EN84 100 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 CTRLP40313 264 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 RPL37AP61513 92 aaKnown RBP4.64□□□□□ -1.67
PCNX1-213ENST00000556846 RNASEKQ6P5S7 137 aaKnown RBP4.64□□□□□ -1.67
PCNX1-213ENST00000556846 TEX261Q6UWH6 196 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 Q6ZNX1 250 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 C9orf163Q8N9P6 203 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 GATD1Q8NB37 220 aa4.64□□□□□ -1.67
PCNX1-213ENST00000556846 EIF5A2Q9GZV4 153 aaKnown RBP4.64□□□□□ -1.67
PCNX1-213ENST00000556846 GAGE12HA6NDE8 117 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 KRTAP29-1A8MX34 341 aaPredicted RBP4.63□□□□□ -1.67
PCNX1-213ENST00000556846 TMEM250H0YL14 139 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 PMCHP20382 165 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 FOXA3P55318 350 aaPredicted RBP4.63□□□□□ -1.67
PCNX1-213ENST00000556846 CFAP161Q6P656 301 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 KRTAP26-1Q6PEX3 210 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 SDIM1Q6ZPB5 146 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 GTSF1Q8WW33 167 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
PCNX1-213ENST00000556846 CNFNQ9BYD5 112 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 GFRA4Q9GZZ7 299 aa4.63□□□□□ -1.67
PCNX1-213ENST00000556846 IGHV3-64A0A075B6Q5 118 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.62□□□□□ -1.67
PCNX1-213ENST00000556846 IGKV2-29A2NJV5 120 aaPredicted RBP4.62□□□□□ -1.67
PCNX1-213ENST00000556846 SDHAF1A6NFY7 115 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 I3L3M4 83 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 NCR2O95944 276 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 APCSP02743 223 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
PCNX1-213ENST00000556846 FAM231DQ6ZW35 169 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 TMEM101Q96IK0 257 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 BTF3L4Q96K17 158 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
PCNX1-213ENST00000556846 ZNF727A8MUV8 499 aa4.61□□□□□ -1.67
PCNX1-213ENST00000556846 H7C423 109 aa4.61□□□□□ -1.67
PCNX1-213ENST00000556846 FGF6P10767 208 aa4.61□□□□□ -1.67
PCNX1-213ENST00000556846 CNBPP62633 177 aaKnown RBP4.61□□□□□ -1.67
PCNX1-213ENST00000556846 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
PCNX1-213ENST00000556846 SMIM7Q9BQ49 75 aa4.61□□□□□ -1.67
PCNX1-213ENST00000556846 ST20Q9HBF5 79 aa4.61□□□□□ -1.67
PCNX1-213ENST00000556846 A0A1B0GUT8 65 aa4.6□□□□□ -1.67
PCNX1-213ENST00000556846 HIGD1CA8MV81 97 aa4.6□□□□□ -1.67
PCNX1-213ENST00000556846 OXTP01178 125 aa4.6□□□□□ -1.67
PCNX1-213ENST00000556846 RPS10P46783 165 aaKnown RBP4.6□□□□□ -1.67
PCNX1-213ENST00000556846 HIGD2BQ4VC39 106 aa4.6□□□□□ -1.67
PCNX1-213ENST00000556846 CT83Q5H943 113 aa4.6□□□□□ -1.67
PCNX1-213ENST00000556846 OR5A1Q8NGJ0 315 aa4.6□□□□□ -1.67
PCNX1-213ENST00000556846 TSKUQ8WUA8 353 aa4.6□□□□□ -1.67
PCNX1-213ENST00000556846 PANO1I0J062 215 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms