RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 DPH3Q96FX2 82 aa3.03□□□□□ -1.92
HIF1A-209ENST00000556827 WDR61Q9GZS3 305 aaKnown RBP3.03□□□□□ -1.92
HIF1A-209ENST00000556827 DPH3P1Q9H4G8 78 aa3.03□□□□□ -1.92
HIF1A-209ENST00000556827 PKHD1P08F94 4074 aa3.03□□□□□ -1.93
HIF1A-209ENST00000556827 TMEM262E9PQX1 116 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 SNAI2O43623 268 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 IGLV2-8P01709 118 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 CRPP02741 224 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 ASIPP42127 132 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 RPL37AP61513 92 aaKnown RBP3.02□□□□□ -1.93
HIF1A-209ENST00000556827 PKIAP61925 76 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 SMUG1Q53HV7 270 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 DAZ4Q86SG3 579 aaKnown RBP3.02□□□□□ -1.93
HIF1A-209ENST00000556827 OR2T35Q8NGX2 323 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 OR2G3Q8NGZ4 309 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 PTH2Q96A98 100 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 UBE2WQ96B02 151 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 CHCHD7Q9BUK0 85 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 C11orf1Q9H5F2 150 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 OR5AC2Q9NZP5 309 aa3.02□□□□□ -1.93
HIF1A-209ENST00000556827 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 A0A0D9SG52 128 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 PLA2G10O15496 165 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 ATP5LO75964 103 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 GCGP01275 180 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 FLI1Q01543 452 aaPredicted RBP3.01□□□□□ -1.93
HIF1A-209ENST00000556827 REG3AQ06141 175 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 IL15RAQ13261 267 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 PRNTQ86SH4 94 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 C5orf17Q8NAS9 161 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 CIRBP-AS1Q8TBR5 109 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 ENKURQ8TC29 256 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 ZC2HC1AQ96GY0 325 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 CCDC32Q9BV29 185 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 PSG8Q9UQ74 426 aa3.01□□□□□ -1.93
HIF1A-209ENST00000556827 SRRM2Q9UQ35 2752 aaKnown RBP3.01□□□□□ -1.93
HIF1A-209ENST00000556827 DNAH2Q9P225 4427 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 FABP5P3A8MUU1 101 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 B4DEV8 164 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 IFNA7P01567 189 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 MBP02144 154 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 ANGP03950 147 aaKnown RBP3□□□□□ -1.93
HIF1A-209ENST00000556827 TCRAP04437 139 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 RPL12P30050 165 aaKnown RBP3□□□□□ -1.93
HIF1A-209ENST00000556827 GNG5P63218 68 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 WFDC2Q14508 124 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 FAM74A4Q5TZK3 123 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 DPPA3Q6W0C5 159 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 NIT1Q86X76 327 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 SMIM3Q9BZL3 60 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 HSPB11Q9Y547 144 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 PHLDA3Q9Y5J5 127 aa3□□□□□ -1.93
HIF1A-209ENST00000556827 RYR1P21817 5038 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.99□□□□□ -1.93
HIF1A-209ENST00000556827 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 HMGB3O15347 200 aaKnown RBP2.99□□□□□ -1.93
HIF1A-209ENST00000556827 SSNA1O43805 119 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 SIX6O95475 246 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 CXorf1O96002 111 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 HLA-DQA1P01909 254 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 ARL14EPLP0DKL9 152 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 TPT1P13693 172 aaKnown RBP2.99□□□□□ -1.93
HIF1A-209ENST00000556827 CDC34P49427 236 aaPredicted RBP2.99□□□□□ -1.93
HIF1A-209ENST00000556827 PPP1R1CQ8WVI7 109 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 TVP23CQ96ET8 276 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 SAMD10Q9BYL1 202 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 NKX6-2Q9C056 277 aaPredicted RBP2.99□□□□□ -1.93
HIF1A-209ENST00000556827 TMEM167BQ9NRX6 74 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 EPDR1Q9UM22 224 aa2.99□□□□□ -1.93
HIF1A-209ENST00000556827 HSPG2P98160 4391 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 TRBV7-3A0A075B6L6 115 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 M0R381 172 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 MPC2O95563 127 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 RNASE3P12724 160 aaKnown RBP2.98□□□□□ -1.93
HIF1A-209ENST00000556827 GCHFRP30047 84 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
HIF1A-209ENST00000556827 RAB2AP61019 212 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 RPL19P84098 196 aaKnown RBP2.98□□□□□ -1.93
HIF1A-209ENST00000556827 MIAQ16674 131 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 TMEM97Q5BJF2 176 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 FAM162BQ5T6X4 162 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 Q6ZRU5 148 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 ZFP82Q8N141 532 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 TMEM75Q8N9X5 138 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 S100ZQ8WXG8 99 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 ACTR3CQ9C0K3 210 aaPredicted RBP2.98□□□□□ -1.93
HIF1A-209ENST00000556827 IL36BQ9NZH7 164 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
HIF1A-209ENST00000556827 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 DNAH17Q9UFH2 4485 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 A0A096LNJ9 63 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 TRBV6-8A0A0A6YYG3 113 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 A0A1W2PRE2 83 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 INMT-MINDY4F8WBC2 141 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 H3BVH4 76 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 M0R036 132 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 EIF3GO75821 320 aaKnown RBP eCLIP2.97□□□□□ -1.93
HIF1A-209ENST00000556827 ARMS2P0C7Q2 107 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 STAG3L2P0CL84 134 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms