RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 Q6ZTI0 123 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 CHCHD7Q9BUK0 85 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 HECTD1Q9ULT8 2610 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 SETD2Q9BYW2 2564 aaPredicted RBP7.28□□□□□ -1.24
TMEM260-211ENST00000556648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.28□□□□□ -1.24
TMEM260-211ENST00000556648 IGKV2-29A2NJV5 120 aaPredicted RBP7.28□□□□□ -1.24
TMEM260-211ENST00000556648 LINC01549A6NIU2 74 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 RHODO00212 210 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 TMEM170BQ5T4T1 132 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 CEND1Q8N111 149 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 ZNF479Q96JC4 524 aa7.28□□□□□ -1.24
TMEM260-211ENST00000556648 TRBV7-3A0A075B6L6 115 aa7.27□□□□□ -1.25
TMEM260-211ENST00000556648 C9orf118A6NHY6 69 aa7.27□□□□□ -1.25
TMEM260-211ENST00000556648 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
TMEM260-211ENST00000556648 H3BUT2 72 aa7.27□□□□□ -1.25
TMEM260-211ENST00000556648 SETXQ7Z333 2677 aaKnown RBP7.27□□□□□ -1.25
TMEM260-211ENST00000556648 A0A0J9YXV3 536 aa7.27□□□□□ -1.25
TMEM260-211ENST00000556648 PLAC8L1A1L4L8 177 aa7.27□□□□□ -1.25
TMEM260-211ENST00000556648 NDUFA11Q86Y39 141 aa7.27□□□□□ -1.25
TMEM260-211ENST00000556648 NIPBLQ6KC79 2804 aaeCLIP7.26□□□□□ -1.25
TMEM260-211ENST00000556648 HIVEP2P31629 2446 aa7.26□□□□□ -1.25
TMEM260-211ENST00000556648 NFE4Q86UQ8 179 aa7.26□□□□□ -1.25
TMEM260-211ENST00000556648 LINC00482Q8N8I6 264 aa7.26□□□□□ -1.25
TMEM260-211ENST00000556648 OR4C5Q8NGB2 326 aa7.26□□□□□ -1.25
TMEM260-211ENST00000556648 TMEM263Q8WUH6 116 aaKnown RBP7.26□□□□□ -1.25
TMEM260-211ENST00000556648 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
TMEM260-211ENST00000556648 TM2D2Q9BX73 214 aa7.26□□□□□ -1.25
TMEM260-211ENST00000556648 NOP10Q9NPE3 64 aaKnown RBP7.26□□□□□ -1.25
TMEM260-211ENST00000556648 NHP2Q9NX24 153 aaKnown RBP7.26□□□□□ -1.25
TMEM260-211ENST00000556648 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 PF4P02776 101 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 ZNF22P17026 224 aaPredicted RBP7.25□□□□□ -1.25
TMEM260-211ENST00000556648 HERVK_113P61574 105 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 Q6ZUT4 128 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 VCX2Q9H322 139 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
TMEM260-211ENST00000556648 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
TMEM260-211ENST00000556648 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
TMEM260-211ENST00000556648 CMC4P56277 68 aaPredicted RBP7.24□□□□□ -1.25
TMEM260-211ENST00000556648 DNAJC30Q96LL9 226 aa7.24□□□□□ -1.25
TMEM260-211ENST00000556648 AMELXQ99217 191 aa7.24□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE12BA1L429 117 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE7O76087 117 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE12FP0CL80 117 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE12GP0CL81 117 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE12IP0CL82 117 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 TAL2Q16559 108 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 FAM110AQ9BQ89 295 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 PYGO1Q9Y3Y4 419 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 K7EQD1 137 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 COTL1Q14019 142 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 JMJD1CQ15652 2540 aa7.23□□□□□ -1.25
TMEM260-211ENST00000556648 LOC100131303A0A0U1RQF7 123 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 A0A1W2PPM0 123 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 J3QQQ9 107 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 C12orf74Q32Q52 190 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 SCGB1D4Q6XE38 83 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 C16orf74Q96GX8 76 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 A0A0J9YY99 117 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE12JA6NER3 117 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 K7EP34 96 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE4Q13068 117 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE5Q13069 117 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 DAZ2Q13117 558 aaKnown RBP7.22□□□□□ -1.25
TMEM260-211ENST00000556648 GAGE13Q4V321 117 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 SLC25A29Q8N8R3 303 aa7.22□□□□□ -1.25
TMEM260-211ENST00000556648 LEPROTO15243 131 aa7.21□□□□□ -1.26
TMEM260-211ENST00000556648 LINC00694P0DN24 101 aa7.21□□□□□ -1.26
TMEM260-211ENST00000556648 SAMD5Q5TGI4 173 aa7.21□□□□□ -1.26
TMEM260-211ENST00000556648 NTM-AS1Q6ZSK4 140 aa7.21□□□□□ -1.26
TMEM260-211ENST00000556648 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.26
TMEM260-211ENST00000556648 FN1P02751 2386 aaKnown RBP7.21□□□□□ -1.26
TMEM260-211ENST00000556648 TRAV8-3A0A0A6YYJ7 113 aa7.2□□□□□ -1.26
TMEM260-211ENST00000556648 GAGE10A6NGK3 116 aa7.2□□□□□ -1.26
TMEM260-211ENST00000556648 LGALS3P17931 250 aaKnown RBP7.2□□□□□ -1.26
TMEM260-211ENST00000556648 MRPS36P82909 103 aaKnown RBP7.2□□□□□ -1.26
TMEM260-211ENST00000556648 RRN3P1Q2M238 152 aa7.2□□□□□ -1.26
TMEM260-211ENST00000556648 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.2□□□□□ -1.26
TMEM260-211ENST00000556648 OR5A1Q8NGJ0 315 aa7.2□□□□□ -1.26
TMEM260-211ENST00000556648 TRGV2A0A075B6R0 118 aa7.2□□□□□ -1.26
TMEM260-211ENST00000556648 IGLL5B9A064 214 aa7.2□□□□□ -1.26
TMEM260-211ENST00000556648 C1QTNF4Q9BXJ3 329 aa7.2□□□□□ -1.26
TMEM260-211ENST00000556648 CRLF1O75462 422 aa7.19□□□□□ -1.26
TMEM260-211ENST00000556648 UBE2D3P61077 147 aa7.19□□□□□ -1.26
TMEM260-211ENST00000556648 UBE2D2P62837 147 aa7.19□□□□□ -1.26
TMEM260-211ENST00000556648 RPL36AP83881 106 aaKnown RBP7.19□□□□□ -1.26
TMEM260-211ENST00000556648 RPL36ALQ969Q0 106 aaKnown RBP7.19□□□□□ -1.26
TMEM260-211ENST00000556648 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
TMEM260-211ENST00000556648 NOTCH3Q9UM47 2321 aa7.19□□□□□ -1.26
TMEM260-211ENST00000556648 A0A1B0GWB2 263 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 A8MZ25 164 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
TMEM260-211ENST00000556648 OVOL2Q9BRP0 275 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms