RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 ZNF492Q9P255 531 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV1-69DA0A0B4J2H0 117 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 CLPSL1A2RUU4 121 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV1-69P01742 117 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 SMCPP49901 116 aaPredicted RBP3.84□□□□□ -1.79
TMEM260-210ENST00000556422 CRIP1P50238 77 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 PDE6HQ13956 83 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 Q8N1Y9 231 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 LYPD1Q8N2G4 141 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 PGLYRP4Q96LB8 373 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 RPP21Q9H633 154 aaKnown RBP3.84□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV1-24A0A0C4DH33 117 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 H3BMM0 161 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 LGALS9O00182 355 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 AVPP01185 164 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 SCGB1D4Q6XE38 83 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 PRNTQ86SH4 94 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 C1orf158Q8N1D5 194 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 NEXN-AS1Q8NBZ9 246 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 UBE2WQ96B02 151 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 Q9H8V8 135 aa3.84□□□□□ -1.8
TMEM260-210ENST00000556422 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 HBBP68871 147 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 DCANP1Q8TF63 244 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 ODF3Q96PU9 254 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 ESM1Q9NQ30 184 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 A0A096LNT2 108 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 CRIP2P52943 208 aaPredicted RBP3.83□□□□□ -1.8
TMEM260-210ENST00000556422 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 PSMG3-AS1Q96PY0 264 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 HLA-DMBP28068 263 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 LINC00173Q6ZV60 143 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 ZNF575Q86XF7 245 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 C8orf49Q96NF6 230 aa3.83□□□□□ -1.8
TMEM260-210ENST00000556422 NF1P21359 2839 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 ITPR3Q14573 2671 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 MSMBP08118 114 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 LINC01545Q5VT33 79 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 IGFL4Q6B9Z1 124 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 Q6ZS46 218 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 GFRA4Q9GZZ7 299 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 MYMXA0A1B0GTQ4 84 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 LINC01549A6NIU2 74 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 NPYP01303 97 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 CLEC19AQ6UXS0 136 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 TMEM190Q8WZ59 177 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 CHCHD1Q96BP2 118 aaKnown RBP3.82□□□□□ -1.8
TMEM260-210ENST00000556422 URB1-AS1Q96HZ7 61 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 TLN2Q9Y4G6 2542 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 IGKV2-40A0A087WW87 121 aaPredicted RBP3.82□□□□□ -1.8
TMEM260-210ENST00000556422 IGKV2D-40P01614 121 aaPredicted RBP3.82□□□□□ -1.8
TMEM260-210ENST00000556422 Q6ZRU5 148 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 PRR15Q8IV56 129 aa3.82□□□□□ -1.8
TMEM260-210ENST00000556422 SLC25A16P16260 332 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 Q1RN00 199 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 PSMG4Q5JS54 123 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 A6NDX4 124 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 F5H697 171 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 H3BUX3 64 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 TRBV12-3P01733 135 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 Q8TAT8 98 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 PRRC2AP48634 2157 aaKnown RBP3.81□□□□□ -1.8
TMEM260-210ENST00000556422 C2CD3Q4AC94 2353 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 TRBV7-1A0A0A6YYK4 115 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 IGHV1-58A0A0C4DH39 117 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 IGHG2P01859 326 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 ZNF80P51504 273 aaPredicted RBP3.81□□□□□ -1.8
TMEM260-210ENST00000556422 BLCAPP62952 87 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 LAGE3Q14657 143 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 LY6EQ16553 131 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 FAM19A3Q7Z5A8 133 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 PRSS3P2Q8NHM4 247 aa3.81□□□□□ -1.8
TMEM260-210ENST00000556422 IGHV3OR16-13A0A075B7E8 117 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 IGHV3-74A0A0B4J1X5 117 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 IGHV3-66A0A0C4DH42 116 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 PRAC2D3DTV9 90 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 ARMS2P0C7Q2 107 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 ERCC8Q13216 396 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 PHLDA1Q8WV24 401 aaPredicted RBP3.8□□□□□ -1.8
TMEM260-210ENST00000556422 PRR25Q96S07 402 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 PDZD2O15018 2839 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 ITPR2Q14571 2701 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 B4DSR2 109 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 UNQ9165/PRO28630Q6UXU0 137 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 ZFP2Q6ZN57 461 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 LINC00643Q86TS7 51 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 FLNAP21333 2647 aaKnown RBP3.8□□□□□ -1.8
TMEM260-210ENST00000556422 IGHV3-49A0A0A0MS15 119 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 FAM223BA6NKX1 122 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 NDUFS5O43920 106 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 KRTAP10-9P60411 292 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 FAM223AQ8IWN6 122 aa3.8□□□□□ -1.8
TMEM260-210ENST00000556422 KLK15Q9H2R5 256 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms