RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PTH2Q96A98 100 aa11.08□□□□□ -0.64
NEK9-209ENST00000556170 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
NEK9-209ENST00000556170 COX6CP09669 75 aa11.07□□□□□ -0.64
NEK9-209ENST00000556170 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
NEK9-209ENST00000556170 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
NEK9-209ENST00000556170 TEX15Q9BXT5 2789 aa11.07□□□□□ -0.64
NEK9-209ENST00000556170 Q6YL49 198 aa11.07□□□□□ -0.64
NEK9-209ENST00000556170 TRGV4A0A0C4DH28 118 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 J3QQQ9 107 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 FOXI1Q12951 378 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 INSL3P51460 131 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 SVEP1Q4LDE5 3571 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 CCL24O00175 119 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 HHLA3Q9XRX5 114 aa11.06□□□□□ -0.64
NEK9-209ENST00000556170 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
NEK9-209ENST00000556170 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
NEK9-209ENST00000556170 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
NEK9-209ENST00000556170 HELZ2Q9BYK8 2649 aaKnown RBP11.05□□□□□ -0.64
NEK9-209ENST00000556170 UFSP1Q6NVU6 142 aa11.04□□□□□ -0.64
NEK9-209ENST00000556170 ZNF702PQ9H963 129 aa11.04□□□□□ -0.64
NEK9-209ENST00000556170 M0R2P5 195 aa11.04□□□□□ -0.64
NEK9-209ENST00000556170 SHISA2Q6UWI4 295 aa11.04□□□□□ -0.64
NEK9-209ENST00000556170 SOCS3O14543 225 aa11.03□□□□□ -0.64
NEK9-209ENST00000556170 RPL36AP83881 106 aaKnown RBP11.03□□□□□ -0.64
NEK9-209ENST00000556170 Q6ZUT4 128 aa11.03□□□□□ -0.64
NEK9-209ENST00000556170 RPL36ALQ969Q0 106 aaKnown RBP11.03□□□□□ -0.64
NEK9-209ENST00000556170 KLLNB2CW77 178 aa11.03□□□□□ -0.64
NEK9-209ENST00000556170 C9orf153Q5TBE3 101 aa11.03□□□□□ -0.64
NEK9-209ENST00000556170 CITED2Q99967 270 aaPredicted RBP11.02□□□□□ -0.64
NEK9-209ENST00000556170 HTN3P15516 51 aa11.02□□□□□ -0.65
NEK9-209ENST00000556170 CIRBPQ14011 172 aaKnown RBP11.02□□□□□ -0.65
NEK9-209ENST00000556170 NEXN-AS1Q8NBZ9 246 aa11.02□□□□□ -0.65
NEK9-209ENST00000556170 MED14OSP0DP75 135 aa11.02□□□□□ -0.65
NEK9-209ENST00000556170 PLEKHB2Q96CS7 222 aa11.02□□□□□ -0.65
NEK9-209ENST00000556170 CHCHD5Q9BSY4 110 aa11.02□□□□□ -0.65
NEK9-209ENST00000556170 NOP10Q9NPE3 64 aaKnown RBP11.02□□□□□ -0.65
NEK9-209ENST00000556170 TRAV12-1A0A0B4J245 112 aa11.01□□□□□ -0.65
NEK9-209ENST00000556170 CRIP2P52943 208 aaPredicted RBP11.01□□□□□ -0.65
NEK9-209ENST00000556170 IGHV4-4A0A075B6R2 117 aa11.01□□□□□ -0.65
NEK9-209ENST00000556170 H3BMM0 161 aa11.01□□□□□ -0.65
NEK9-209ENST00000556170 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
NEK9-209ENST00000556170 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
NEK9-209ENST00000556170 MRPL23Q16540 153 aaKnown RBP11□□□□□ -0.65
NEK9-209ENST00000556170 SPENQ96T58 3664 aaKnown RBP11□□□□□ -0.65
NEK9-209ENST00000556170 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
NEK9-209ENST00000556170 E9PLD3 99 aa11□□□□□ -0.65
NEK9-209ENST00000556170 TMEM101Q96IK0 257 aa11□□□□□ -0.65
NEK9-209ENST00000556170 MAP6D1Q9H9H5 199 aa11□□□□□ -0.65
NEK9-209ENST00000556170 DNAJC9-AS1A6NH13 148 aa11□□□□□ -0.65
NEK9-209ENST00000556170 HIGD1BQ9P298 99 aa10.99□□□□□ -0.65
NEK9-209ENST00000556170 CHD6Q8TD26 2715 aa10.99□□□□□ -0.65
NEK9-209ENST00000556170 TRAV8-3A0A0A6YYJ7 113 aa10.99□□□□□ -0.65
NEK9-209ENST00000556170 M0QY20 66 aa10.99□□□□□ -0.65
NEK9-209ENST00000556170 C15orf53Q8NAA6 179 aa10.99□□□□□ -0.65
NEK9-209ENST00000556170 Q6ZSV7 163 aa10.99□□□□□ -0.65
NEK9-209ENST00000556170 RHODO00212 210 aa10.98□□□□□ -0.65
NEK9-209ENST00000556170 C20orf203Q8NBC4 194 aa10.98□□□□□ -0.65
NEK9-209ENST00000556170 C11orf68Q9H3H3 251 aaKnown RBP10.98□□□□□ -0.65
NEK9-209ENST00000556170 NDUFA12Q9UI09 145 aa10.98□□□□□ -0.65
NEK9-209ENST00000556170 TMEM89A2RUT3 159 aa10.98□□□□□ -0.65
NEK9-209ENST00000556170 CRYGDP07320 174 aa10.98□□□□□ -0.65
NEK9-209ENST00000556170 NTN5Q8WTR8 489 aaPredicted RBP10.98□□□□□ -0.65
NEK9-209ENST00000556170 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
NEK9-209ENST00000556170 RPL32P62910 135 aaKnown RBP10.97□□□□□ -0.65
NEK9-209ENST00000556170 RHOHQ15669 191 aa10.97□□□□□ -0.65
NEK9-209ENST00000556170 SPATA25Q9BR10 227 aa10.97□□□□□ -0.65
NEK9-209ENST00000556170 TAL2Q16559 108 aa10.97□□□□□ -0.65
NEK9-209ENST00000556170 SLC25A20O43772 301 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 TEN1Q86WV5 123 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 A0A096LPF7 62 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 J3QKU1 62 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
NEK9-209ENST00000556170 DAND5Q8N907 189 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 OR13C6PQ8NH95 151 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 CELSR1Q9NYQ6 3014 aa10.96□□□□□ -0.65
NEK9-209ENST00000556170 TIMM17AQ99595 171 aa10.96□□□□□ -0.66
NEK9-209ENST00000556170 XGP55808 180 aa10.95□□□□□ -0.66
NEK9-209ENST00000556170 LGALS9O00182 355 aa10.95□□□□□ -0.66
NEK9-209ENST00000556170 C4orf3Q8WVX3 66 aa10.95□□□□□ -0.66
NEK9-209ENST00000556170 WFDC10AQ9H1F0 79 aa10.95□□□□□ -0.66
NEK9-209ENST00000556170 A4D1N5 150 aa10.94□□□□□ -0.66
NEK9-209ENST00000556170 PRIMA1Q86XR5 153 aa10.94□□□□□ -0.66
NEK9-209ENST00000556170 PRO1854Q9UHT4 67 aa10.94□□□□□ -0.66
NEK9-209ENST00000556170 Q6ZTI0 123 aa10.93□□□□□ -0.66
NEK9-209ENST00000556170 A8MZ25 164 aa10.93□□□□□ -0.66
NEK9-209ENST00000556170 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
NEK9-209ENST00000556170 ANKRD29Q8N6D5 301 aa10.92□□□□□ -0.66
NEK9-209ENST00000556170 NDUFV3P56181 108 aaKnown RBP10.92□□□□□ -0.66
NEK9-209ENST00000556170 MUSTN1Q8IVN3 82 aa10.92□□□□□ -0.66
NEK9-209ENST00000556170 TM2D2Q9BX73 214 aa10.92□□□□□ -0.66
NEK9-209ENST00000556170 CCDC179H3BU77 68 aa10.92□□□□□ -0.66
NEK9-209ENST00000556170 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
NEK9-209ENST00000556170 MUC4Q99102 2169 aa10.91□□□□□ -0.66
NEK9-209ENST00000556170 ZMAT4Q9H898 229 aa10.91□□□□□ -0.66
NEK9-209ENST00000556170 SPANXA1Q9NS26 97 aa10.91□□□□□ -0.66
NEK9-209ENST00000556170 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
NEK9-209ENST00000556170 ATRQ13535 2644 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms