RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ORM1P02763 201 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 DNAH10OSP0CZ25 163 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 EVI2AP22794 236 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 G0S2P27469 103 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 PDZD11Q5EBL8 140 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 NFE4Q86UQ8 179 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 BAGE2Q86Y30 109 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 WFDC10BQ8IUB3 73 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 Q8N1X5 172 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 HIST3H2BBQ8N257 126 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 NDFIP1Q9BT67 221 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 TRAPPC1Q9Y5R8 145 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 IGHV3-73A0A0B4J1V6 119 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 SNAI2O43623 268 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 TCRAP04437 139 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 UBE2G1P62253 170 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 TDRG1Q3Y452 100 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 COX19Q49B96 90 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 SMIM15Q7Z3B0 74 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 C5orf17Q8NAS9 161 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 OR2D3Q8NGH3 330 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 KCNS1Q96KK3 526 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 MSRB1Q9NZV6 116 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 VPS13BQ7Z7G8 4022 aa4.54□□□□□ -1.68
PSEN1-216ENST00000556066 TRAV9-1A0A075B6T8 112 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 A0A087WTM6 91 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 SMIM27A0A1W2PRY6 76 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 TMEM238C9JI98 176 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 PRYO14603 147 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 IGLV2-11P01706 119 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 S100A8P05109 93 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 CRYGDP07320 174 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 PMCHP20382 165 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 ZNF876PQ49A33 203 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 FAM231DQ6ZW35 169 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 PRNTQ86SH4 94 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 TMEM75Q8N9X5 138 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 FMC1Q96HJ9 113 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 BTF3L4Q96K17 158 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 PACRGQ96M98 296 aaPredicted RBP4.53□□□□□ -1.68
PSEN1-216ENST00000556066 TCEAL7Q9BRU2 100 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 MLST8Q9BVC4 326 aa4.53□□□□□ -1.68
PSEN1-216ENST00000556066 IGHV3-38A0A0C4DH36 116 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 EPM2AB3EWF7 344 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 K7EP13 123 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 PSCAO43653 123 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 NUPR1O60356 82 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 HSBP1O75506 76 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 LTAP01374 205 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 FABP4P15090 132 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 GATA1P15976 413 aaPredicted RBP4.52□□□□□ -1.69
PSEN1-216ENST00000556066 ZNF80P51504 273 aaPredicted RBP4.52□□□□□ -1.69
PSEN1-216ENST00000556066 UBE2V1Q13404 147 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 OR10J3Q5JRS4 329 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 MRPL54Q6P161 138 aaKnown RBP4.52□□□□□ -1.69
PSEN1-216ENST00000556066 SH2D6Q7Z4S9 175 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 Q86TA4 180 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 BOD1L2Q8IYS8 172 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 SLC25A29Q8N8R3 303 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 OR10D4PQ8NGN7 298 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 PRADC1Q9BSG0 188 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 Q9HAA7 133 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 C11orf21Q9P2W6 132 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 PSG8Q9UQ74 426 aa4.52□□□□□ -1.69
PSEN1-216ENST00000556066 FAT1Q14517 4588 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 TRAV8-6A0A0B4J262 113 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 TRBV6-1A0A0K0K1D8 114 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 GRIFINA4D1Z8 144 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 C19orf71A6NCJ1 209 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 GAGE12HA6NDE8 117 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 SMIM6P0DI80 62 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 S100A2P29034 98 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 RHOHQ15669 191 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 COA6Q5JTJ3 125 aaKnown RBP4.51□□□□□ -1.69
PSEN1-216ENST00000556066 CFAP126Q5VTH2 177 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 TMEM136Q6ZRR5 245 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 NUP35Q8NFH5 326 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 HIST1H2BLQ99880 126 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 GNB1LQ9BYB4 327 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 NIT2Q9NQR4 276 aa4.51□□□□□ -1.69
PSEN1-216ENST00000556066 TRBV6-4A0A1B0GX49 114 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 F2Z2F3 143 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 IGHV3-30P01768 117 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 IGHV3-33P01772 117 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 IGHV3-30-3P0DP02 117 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 IGHV3-30-5P0DP03 117 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 GZMBP10144 247 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 S100A4P26447 101 aaKnown RBP4.5□□□□□ -1.69
PSEN1-216ENST00000556066 KIAA1644Q3SXP7 199 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 PYY3Q5JQD4 70 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 ZC2HC1AQ96GY0 325 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 C9orf85Q96MD7 179 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 RPP21Q9H633 154 aaKnown RBP4.5□□□□□ -1.69
PSEN1-216ENST00000556066 NAT8BQ9UHF3 227 aa4.5□□□□□ -1.69
PSEN1-216ENST00000556066 IGLV5-52A0A0A0MRZ9 124 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms