RNA–Protein interactions for RNA: ENST00000555984.1

NIN-218, Transcript of ninein, humanhuman

TSL 2

Gene NIN, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-218ENST00000555984 CBLN1P23435 193 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 C10orf128Q5T292 105 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 SCIMPQ6UWF3 145 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 LSM10Q969L4 123 aaKnown RBP0.07□□□□□ -2.4
NIN-218ENST00000555984 TSC22D3Q99576 134 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 GRIN2AQ12879 1464 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 HIVEP3Q5T1R4 2406 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 ZMYM4Q5VZL5 1548 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 COL7A1Q02388 2944 aa0.07□□□□□ -2.4
NIN-218ENST00000555984 ERCC6L2Q5T890 1561 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 SHROOM2Q13796 1616 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 BIVM-ERCC5R4GMW8 1640 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 PPRC1Q5VV67 1664 aaKnown RBP0.06□□□□□ -2.4
NIN-218ENST00000555984 PLCE1Q9P212 2302 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 TRAV13-2A0A0B4J235 113 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 SPAARA0A1B0GVQ0 90 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 HCG22E2RYF7 251 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 SNAPC5O75971 98 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 CCDC58Q4VC31 144 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 TTC9CQ8N5M4 171 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 ARL11Q969Q4 196 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 TCEAL4Q96EI5 215 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 AQP10Q96PS8 301 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 FXYD6Q9H0Q3 95 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 V9GYH0 126 aa0.06□□□□□ -2.4
NIN-218ENST00000555984 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
NIN-218ENST00000555984 NCOR1O75376 2440 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 ZNF518AQ6AHZ1 1483 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 MBD5Q9P267 1494 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 NALCNQ8IZF0 1738 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 M0R3E3 92 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 CATR1Q13166 79 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 MEIG1Q5JSS6 88 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 SFTA2Q6UW10 78 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 BAGE3Q86Y29 109 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 SDF2Q99470 211 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 WFDC6Q9BQY6 131 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 TMEM191AQ9H0A3 160 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 AGPAT4-IT1Q9H0P7 198 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 ARHGEF5Q12774 1597 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 KMT2AQ03164 3969 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 PI4KAP42356 2102 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 NHSL1Q5SYE7 1610 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 QRICH2Q9H0J4 1663 aa0.05□□□□□ -2.4
NIN-218ENST00000555984 ZNF609O15014 1411 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 NUP188Q5SRE5 1749 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 CFTRP13569 1480 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 TNXBP22105 4242 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 ARHGEF12Q9NZN5 1544 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 LOC100130705A0A1B0GUX0 176 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 M0R135 149 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 BCE1O60756 84 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 CCL18P55774 89 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 SPAG11BQ08648 103 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 SPAG11AQ6PDA7 123 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 ZNF818PQ6ZRF7 136 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 Q8N8P6 123 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 DPH3Q96FX2 82 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 LINC00470Q9BZP3 86 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 LAMC1P11047 1609 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 HUWE1Q7Z6Z7 4374 aaKnown RBP0.04□□□□□ -2.4
NIN-218ENST00000555984 FLNCQ14315 2725 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 ROCK2O75116 1388 aaKnown RBP0.04□□□□□ -2.4
NIN-218ENST00000555984 ABCA3Q99758 1704 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 PPIP5K1Q6PFW1 1433 aa0.04□□□□□ -2.4
NIN-218ENST00000555984 PTPRQQ9UMZ3 2332 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 SPTBN2O15020 2390 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 PAPPAQ13219 1627 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 ZFHX3Q15911 3703 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 CSMD3Q7Z407 3707 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 RIMS1Q86UR5 1692 aaKnown RBP0.03□□□□□ -2.4
NIN-218ENST00000555984 NDUFA2O43678 99 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 DEFB109BQ30KR1 87 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 TMEM170BQ5T4T1 132 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 CCDC167Q9P0B6 97 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 SERP1Q9Y6X1 66 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 R4GMQ9 66 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 U3KQA8 63 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 LRRC37A2A6NM11 1700 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 CHD1O14646 1710 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 DOPEY2Q9Y3R5 2298 aa0.03□□□□□ -2.4
NIN-218ENST00000555984 CPSF1Q10570 1443 aaKnown RBP0.03□□□□□ -2.41
NIN-218ENST00000555984 FAM208BQ5VWN6 2430 aa0.03□□□□□ -2.41
NIN-218ENST00000555984 IFT140Q96RY7 1462 aa0.03□□□□□ -2.41
NIN-218ENST00000555984 MYCBP2O75592 4640 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 URB1O60287 2271 aaKnown RBP0.02□□□□□ -2.41
NIN-218ENST00000555984 FAT2Q9NYQ8 4349 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 CCL8P80075 99 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 C9orf153Q5TBE3 101 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 Q6AWC8 147 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 Q6JHZ5 121 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 MRPL54Q6P161 138 aaKnown RBP0.02□□□□□ -2.41
NIN-218ENST00000555984 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.02□□□□□ -2.41
NIN-218ENST00000555984 FDCSPQ8NFU4 85 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 COPS9Q8WXC6 57 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 CNFNQ9BYD5 112 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 NDUFA4L2Q9NRX3 87 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 FSIP2Q5CZC0 6907 aa0.02□□□□□ -2.41
NIN-218ENST00000555984 TENM4Q6N022 2769 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms