RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 PRRC2AP48634 2157 aaKnown RBP11.79□□□□□ -0.52
MARK3-209ENST00000555235 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
MARK3-209ENST00000555235 LST1O00453 97 aa11.79□□□□□ -0.52
MARK3-209ENST00000555235 PRB1P04280 392 aa11.79□□□□□ -0.52
MARK3-209ENST00000555235 YAE1D1Q9NRH1 226 aa11.79□□□□□ -0.52
MARK3-209ENST00000555235 HIVEP3Q5T1R4 2406 aa11.79□□□□□ -0.52
MARK3-209ENST00000555235 K7EMT4 169 aa11.79□□□□□ -0.52
MARK3-209ENST00000555235 ZFHX3Q15911 3703 aa11.78□□□□□ -0.52
MARK3-209ENST00000555235 IGHV1OR15-1A0A075B7D0 117 aa11.78□□□□□ -0.52
MARK3-209ENST00000555235 KMT2BQ9UMN6 2715 aaPredicted RBP11.78□□□□□ -0.52
MARK3-209ENST00000555235 CFHR3Q02985 330 aa11.77□□□□□ -0.52
MARK3-209ENST00000555235 ADAMTSL4-AS1Q5T5F5 129 aa11.77□□□□□ -0.52
MARK3-209ENST00000555235 TRAV8-3A0A0A6YYJ7 113 aa11.77□□□□□ -0.53
MARK3-209ENST00000555235 TRBV7-7A0A0K0K1E9 115 aa11.77□□□□□ -0.53
MARK3-209ENST00000555235 TMEM61Q8N0U2 210 aa11.77□□□□□ -0.53
MARK3-209ENST00000555235 PIMREGQ9BSJ6 248 aa11.77□□□□□ -0.53
MARK3-209ENST00000555235 SMIM20Q8N5G0 67 aa11.76□□□□□ -0.53
MARK3-209ENST00000555235 VSIG2Q96IQ7 327 aa11.76□□□□□ -0.53
MARK3-209ENST00000555235 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
MARK3-209ENST00000555235 AKAP6Q13023 2319 aa11.76□□□□□ -0.53
MARK3-209ENST00000555235 MEIG1Q5JSS6 88 aa11.76□□□□□ -0.53
MARK3-209ENST00000555235 CLEC2BQ92478 149 aa11.76□□□□□ -0.53
MARK3-209ENST00000555235 TRGV11A0A075B6L2 103 aa11.75□□□□□ -0.53
MARK3-209ENST00000555235 TRAV12-2A0A075B6T6 113 aa11.75□□□□□ -0.53
MARK3-209ENST00000555235 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
MARK3-209ENST00000555235 TIMM17BO60830 172 aa11.75□□□□□ -0.53
MARK3-209ENST00000555235 C10orf105Q8TEF2 133 aa11.75□□□□□ -0.53
MARK3-209ENST00000555235 SNRPD3P62318 126 aaKnown RBP11.74□□□□□ -0.53
MARK3-209ENST00000555235 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
MARK3-209ENST00000555235 DUX3Q96PT4 197 aa11.74□□□□□ -0.53
MARK3-209ENST00000555235 ACYP1P07311 99 aa11.74□□□□□ -0.53
MARK3-209ENST00000555235 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
MARK3-209ENST00000555235 HERV-K104P63124 156 aa11.73□□□□□ -0.53
MARK3-209ENST00000555235 FAM208BQ5VWN6 2430 aa11.73□□□□□ -0.53
MARK3-209ENST00000555235 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
MARK3-209ENST00000555235 IMUPQ9GZP8 106 aa11.72□□□□□ -0.53
MARK3-209ENST00000555235 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
MARK3-209ENST00000555235 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
MARK3-209ENST00000555235 NPC2P61916 151 aa11.71□□□□□ -0.53
MARK3-209ENST00000555235 SPINK13Q1W4C9 94 aa11.71□□□□□ -0.53
MARK3-209ENST00000555235 Q6ZSV7 163 aa11.71□□□□□ -0.53
MARK3-209ENST00000555235 ZNF843Q8N446 348 aa11.71□□□□□ -0.53
MARK3-209ENST00000555235 CELSR1Q9NYQ6 3014 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 TNFRSF18Q9Y5U5 241 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 SPTAN1Q13813 2472 aaKnown RBP11.7□□□□□ -0.54
MARK3-209ENST00000555235 GNLYP22749 145 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 PSMB8P28062 276 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 TMEM95Q3KNT9 176 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 CEMP1Q6PRD7 247 aaPredicted RBP11.7□□□□□ -0.54
MARK3-209ENST00000555235 COL12A1Q99715 3063 aa11.7□□□□□ -0.54
MARK3-209ENST00000555235 IGHV4-30-2A0A087WSY4 118 aa11.69□□□□□ -0.54
MARK3-209ENST00000555235 MSMBP08118 114 aa11.69□□□□□ -0.54
MARK3-209ENST00000555235 CCL19Q99731 98 aa11.69□□□□□ -0.54
MARK3-209ENST00000555235 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
MARK3-209ENST00000555235 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
MARK3-209ENST00000555235 K7EQG2 157 aa11.68□□□□□ -0.54
MARK3-209ENST00000555235 RNASE13Q5GAN3 156 aaKnown RBP11.68□□□□□ -0.54
MARK3-209ENST00000555235 RNF152Q8N8N0 203 aa11.68□□□□□ -0.54
MARK3-209ENST00000555235 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
MARK3-209ENST00000555235 A8MZ25 164 aa11.67□□□□□ -0.54
MARK3-209ENST00000555235 NDUFA1O15239 70 aa11.67□□□□□ -0.54
MARK3-209ENST00000555235 AVPP01185 164 aa11.67□□□□□ -0.54
MARK3-209ENST00000555235 CHCHD7Q9BUK0 85 aa11.66□□□□□ -0.54
MARK3-209ENST00000555235 VPS13CQ709C8 3753 aa11.66□□□□□ -0.54
MARK3-209ENST00000555235 COX7A2LO14548 114 aa11.66□□□□□ -0.54
MARK3-209ENST00000555235 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
MARK3-209ENST00000555235 COPS9Q8WXC6 57 aa11.66□□□□□ -0.54
MARK3-209ENST00000555235 MYO18BQ8IUG5 2567 aa11.65□□□□□ -0.54
MARK3-209ENST00000555235 IGHV3-73A0A0B4J1V6 119 aa11.65□□□□□ -0.54
MARK3-209ENST00000555235 FAM236AA0A1B0GUQ0 79 aa11.65□□□□□ -0.54
MARK3-209ENST00000555235 FAM236BA0A1B0GV22 79 aa11.65□□□□□ -0.54
MARK3-209ENST00000555235 LINC01587Q99440 93 aa11.65□□□□□ -0.54
MARK3-209ENST00000555235 CITED2Q99967 270 aaPredicted RBP11.65□□□□□ -0.54
MARK3-209ENST00000555235 ATP5J2P56134 94 aa11.65□□□□□ -0.55
MARK3-209ENST00000555235 TIRAPP58753 221 aa11.64□□□□□ -0.55
MARK3-209ENST00000555235 LINC00643Q86TS7 51 aa11.64□□□□□ -0.55
MARK3-209ENST00000555235 IGLV5-45A0A087WSX0 123 aa11.63□□□□□ -0.55
MARK3-209ENST00000555235 TMEM89A2RUT3 159 aa11.63□□□□□ -0.55
MARK3-209ENST00000555235 PIK3CD-AS1Q5SR53 167 aa11.63□□□□□ -0.55
MARK3-209ENST00000555235 DAND5Q8N907 189 aa11.63□□□□□ -0.55
MARK3-209ENST00000555235 PROK1P58294 105 aa11.63□□□□□ -0.55
MARK3-209ENST00000555235 LINC00308Q8TCZ7 52 aa11.63□□□□□ -0.55
MARK3-209ENST00000555235 CDKN2A-AS1Q9UH64 79 aa11.63□□□□□ -0.55
MARK3-209ENST00000555235 FLNCQ14315 2725 aa11.62□□□□□ -0.55
MARK3-209ENST00000555235 IGHV4-59P01825 116 aa11.62□□□□□ -0.55
MARK3-209ENST00000555235 ATP5G1P05496 136 aa11.62□□□□□ -0.55
MARK3-209ENST00000555235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.62□□□□□ -0.55
MARK3-209ENST00000555235 IGKV2-29A2NJV5 120 aaPredicted RBP11.62□□□□□ -0.55
MARK3-209ENST00000555235 DOPEY2Q9Y3R5 2298 aa11.62□□□□□ -0.55
MARK3-209ENST00000555235 B4DSR2 109 aa11.61□□□□□ -0.55
MARK3-209ENST00000555235 DUX5Q96PT3 197 aa11.61□□□□□ -0.55
MARK3-209ENST00000555235 TRACP01848 142 aa11.61□□□□□ -0.55
MARK3-209ENST00000555235 DEFB112Q30KQ8 113 aa11.61□□□□□ -0.55
MARK3-209ENST00000555235 LINC00467Q9BRT7 94 aa11.61□□□□□ -0.55
MARK3-209ENST00000555235 SYNJ2BPP57105 145 aa11.6□□□□□ -0.55
MARK3-209ENST00000555235 DNAJC30Q96LL9 226 aa11.6□□□□□ -0.55
MARK3-209ENST00000555235 SDIM1Q6ZPB5 146 aa11.6□□□□□ -0.55
MARK3-209ENST00000555235 NACAE9PAV3 2078 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms