RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 EIF5AP63241 154 aaKnown RBP9.8□□□□□ -0.84
NEDD1-207ENST00000555114 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
NEDD1-207ENST00000555114 BATF3Q9NR55 127 aa9.8□□□□□ -0.84
NEDD1-207ENST00000555114 KANTRA0A1W2PQU2 76 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 GAGE12HA6NDE8 117 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 COX6A2Q02221 97 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 MAJINQ3KP22 176 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 CENPWQ5EE01 88 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 GTSF1Q8WW33 167 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 SMIM12Q96EX1 92 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
NEDD1-207ENST00000555114 AMMECR1LQ6DCA0 310 aa9.78□□□□□ -0.84
NEDD1-207ENST00000555114 C11orf52Q96A22 123 aa9.78□□□□□ -0.84
NEDD1-207ENST00000555114 BIN3Q9NQY0 253 aa9.78□□□□□ -0.84
NEDD1-207ENST00000555114 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
NEDD1-207ENST00000555114 IGKV3OR2-268A0A0C4DH90 116 aa9.77□□□□□ -0.85
NEDD1-207ENST00000555114 TEX46H3BTG2 121 aa9.77□□□□□ -0.85
NEDD1-207ENST00000555114 IFNA1P01562 189 aa9.77□□□□□ -0.85
NEDD1-207ENST00000555114 GNG4P50150 75 aa9.77□□□□□ -0.85
NEDD1-207ENST00000555114 C15orf56Q8N910 161 aa9.77□□□□□ -0.85
NEDD1-207ENST00000555114 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
NEDD1-207ENST00000555114 C19orf71A6NCJ1 209 aa9.76□□□□□ -0.85
NEDD1-207ENST00000555114 HIGD2BQ4VC39 106 aa9.76□□□□□ -0.85
NEDD1-207ENST00000555114 LYZL1Q6UWQ5 148 aa9.76□□□□□ -0.85
NEDD1-207ENST00000555114 LINC01600Q96MT4 127 aa9.76□□□□□ -0.85
NEDD1-207ENST00000555114 LINC00474Q9P2X8 69 aa9.76□□□□□ -0.85
NEDD1-207ENST00000555114 BCL2L11O43521 198 aa9.75□□□□□ -0.85
NEDD1-207ENST00000555114 NTF3P20783 257 aa9.75□□□□□ -0.85
NEDD1-207ENST00000555114 CCL20P78556 96 aa9.75□□□□□ -0.85
NEDD1-207ENST00000555114 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
NEDD1-207ENST00000555114 STPG4Q8N801 248 aa9.75□□□□□ -0.85
NEDD1-207ENST00000555114 HMSDA8MTL9 139 aa9.74□□□□□ -0.85
NEDD1-207ENST00000555114 SMLR1H3BR10 107 aa9.74□□□□□ -0.85
NEDD1-207ENST00000555114 NCR2O95944 276 aa9.74□□□□□ -0.85
NEDD1-207ENST00000555114 RGS21Q2M5E4 152 aa9.74□□□□□ -0.85
NEDD1-207ENST00000555114 REG3GQ6UW15 175 aa9.74□□□□□ -0.85
NEDD1-207ENST00000555114 PRSS3P2Q8NHM4 247 aa9.74□□□□□ -0.85
NEDD1-207ENST00000555114 CHCHD10Q8WYQ3 142 aaPredicted RBP9.74□□□□□ -0.85
NEDD1-207ENST00000555114 GVQW2A0A096LPI5 108 aaPredicted RBP9.73□□□□□ -0.85
NEDD1-207ENST00000555114 H7C423 109 aa9.73□□□□□ -0.85
NEDD1-207ENST00000555114 PDE6DO43924 150 aa9.73□□□□□ -0.85
NEDD1-207ENST00000555114 TWIST1Q15672 202 aa9.73□□□□□ -0.85
NEDD1-207ENST00000555114 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
NEDD1-207ENST00000555114 C9orf62Q8N4C0 152 aa9.73□□□□□ -0.85
NEDD1-207ENST00000555114 LYPD6BQ8NI32 183 aa9.73□□□□□ -0.85
NEDD1-207ENST00000555114 TRAV1-1A0A0B4J248 108 aa9.72□□□□□ -0.85
NEDD1-207ENST00000555114 APCSP02743 223 aa9.72□□□□□ -0.85
NEDD1-207ENST00000555114 CTRLP40313 264 aa9.72□□□□□ -0.85
NEDD1-207ENST00000555114 SPINK6Q6UWN8 80 aa9.72□□□□□ -0.85
NEDD1-207ENST00000555114 SMIM15Q7Z3B0 74 aa9.72□□□□□ -0.85
NEDD1-207ENST00000555114 A0A0J9YXV3 536 aa9.71□□□□□ -0.86
NEDD1-207ENST00000555114 RAB19A4D1S5 217 aa9.71□□□□□ -0.86
NEDD1-207ENST00000555114 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
NEDD1-207ENST00000555114 EIF5AL1Q6IS14 154 aaKnown RBP9.71□□□□□ -0.86
NEDD1-207ENST00000555114 MED9Q9NWA0 146 aa9.71□□□□□ -0.86
NEDD1-207ENST00000555114 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-207ENST00000555114 TEX261Q6UWH6 196 aa9.7□□□□□ -0.86
NEDD1-207ENST00000555114 GATD1Q8NB37 220 aa9.7□□□□□ -0.86
NEDD1-207ENST00000555114 BTF3L4Q96K17 158 aa9.7□□□□□ -0.86
NEDD1-207ENST00000555114 TNXBP22105 4242 aa9.69□□□□□ -0.86
NEDD1-207ENST00000555114 A0A096LNI7 61 aa9.69□□□□□ -0.86
NEDD1-207ENST00000555114 FGF6P10767 208 aa9.69□□□□□ -0.86
NEDD1-207ENST00000555114 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-207ENST00000555114 Q6ZNX1 250 aa9.69□□□□□ -0.86
NEDD1-207ENST00000555114 TMEM101Q96IK0 257 aa9.69□□□□□ -0.86
NEDD1-207ENST00000555114 CNFNQ9BYD5 112 aa9.69□□□□□ -0.86
NEDD1-207ENST00000555114 LRP2P98164 4655 aa9.68□□□□□ -0.86
NEDD1-207ENST00000555114 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
NEDD1-207ENST00000555114 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
NEDD1-207ENST00000555114 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
NEDD1-207ENST00000555114 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
NEDD1-207ENST00000555114 FOXI1Q12951 378 aa9.68□□□□□ -0.86
NEDD1-207ENST00000555114 NUDT10Q8NFP7 164 aa9.68□□□□□ -0.86
NEDD1-207ENST00000555114 OR5A1Q8NGJ0 315 aa9.68□□□□□ -0.86
NEDD1-207ENST00000555114 NUDT11Q96G61 164 aa9.68□□□□□ -0.86
NEDD1-207ENST00000555114 RPP21Q9H633 154 aaKnown RBP9.68□□□□□ -0.86
NEDD1-207ENST00000555114 XCL1P47992 114 aa9.67□□□□□ -0.86
NEDD1-207ENST00000555114 Q6ZRP5 223 aa9.67□□□□□ -0.86
NEDD1-207ENST00000555114 CARD19Q96LW7 228 aa9.67□□□□□ -0.86
NEDD1-207ENST00000555114 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
NEDD1-207ENST00000555114 RPL39LQ96EH5 51 aaKnown RBP9.66□□□□□ -0.86
NEDD1-207ENST00000555114 TRBV20OR9-2A0A075B6H5 130 aa9.65□□□□□ -0.86
NEDD1-207ENST00000555114 I3L3M4 83 aa9.65□□□□□ -0.86
NEDD1-207ENST00000555114 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
NEDD1-207ENST00000555114 BCL2P10415 239 aa9.65□□□□□ -0.86
NEDD1-207ENST00000555114 PMCHP20382 165 aa9.65□□□□□ -0.86
NEDD1-207ENST00000555114 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
NEDD1-207ENST00000555114 SS18Q15532 418 aa9.65□□□□□ -0.86
NEDD1-207ENST00000555114 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
NEDD1-207ENST00000555114 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
NEDD1-207ENST00000555114 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
NEDD1-207ENST00000555114 CCL25O15444 150 aa9.64□□□□□ -0.87
NEDD1-207ENST00000555114 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
NEDD1-207ENST00000555114 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
NEDD1-207ENST00000555114 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
NEDD1-207ENST00000555114 MRAP2Q96G30 205 aa9.63□□□□□ -0.87
NEDD1-207ENST00000555114 RNASE7Q9H1E1 156 aaKnown RBP9.63□□□□□ -0.87
NEDD1-207ENST00000555114 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
NEDD1-207ENST00000555114 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
NEDD1-207ENST00000555114 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms