RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 UBE2D3P61077 147 aa9.88□□□□□ -0.83
XRCC3-210ENST00000554974 UBE2D2P62837 147 aa9.88□□□□□ -0.83
XRCC3-210ENST00000554974 SUMO4Q6EEV6 95 aa9.88□□□□□ -0.83
XRCC3-210ENST00000554974 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
XRCC3-210ENST00000554974 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
XRCC3-210ENST00000554974 MT-ND4LP03901 98 aa9.87□□□□□ -0.83
XRCC3-210ENST00000554974 MGPP08493 103 aa9.87□□□□□ -0.83
XRCC3-210ENST00000554974 RPL36AP83881 106 aaKnown RBP9.87□□□□□ -0.83
XRCC3-210ENST00000554974 RPL36ALQ969Q0 106 aaKnown RBP9.87□□□□□ -0.83
XRCC3-210ENST00000554974 TMEM191AQ9H0A3 160 aa9.87□□□□□ -0.83
XRCC3-210ENST00000554974 CARHSP1Q9Y2V2 147 aaKnown RBP9.87□□□□□ -0.83
XRCC3-210ENST00000554974 UBR4Q5T4S7 5183 aa9.86□□□□□ -0.83
XRCC3-210ENST00000554974 H7C1H1 209 aa9.86□□□□□ -0.83
XRCC3-210ENST00000554974 RIGQ13278 110 aa9.86□□□□□ -0.83
XRCC3-210ENST00000554974 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
XRCC3-210ENST00000554974 IGKV2D-24A0A075B6R9 120 aa9.85□□□□□ -0.83
XRCC3-210ENST00000554974 A0A1B0GW15 77 aa9.85□□□□□ -0.83
XRCC3-210ENST00000554974 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
XRCC3-210ENST00000554974 A0A1B0GXF2 115 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 RASL11AQ6T310 242 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 GATD1Q8NB37 220 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 RNF185Q96GF1 192 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 KLK12Q9UKR0 248 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 COX11Q9Y6N1 276 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 URGCP-MRPS24S4R325 110 aa9.84□□□□□ -0.83
XRCC3-210ENST00000554974 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
XRCC3-210ENST00000554974 NIT1Q86X76 327 aa9.83□□□□□ -0.84
XRCC3-210ENST00000554974 RMI2Q96E14 147 aa9.83□□□□□ -0.84
XRCC3-210ENST00000554974 NIT2Q9NQR4 276 aa9.83□□□□□ -0.84
XRCC3-210ENST00000554974 TRAV26-2A0A0B4J265 109 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 ATP5L2Q7Z4Y8 100 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 Q8N976 141 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 UBE2WQ96B02 151 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 IMMP2LQ96T52 175 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 CHCHD7Q9BUK0 85 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 CTDSP1Q9GZU7 261 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
XRCC3-210ENST00000554974 RAB4AP20338 218 aa9.81□□□□□ -0.84
XRCC3-210ENST00000554974 HBBP68871 147 aa9.81□□□□□ -0.84
XRCC3-210ENST00000554974 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
XRCC3-210ENST00000554974 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
XRCC3-210ENST00000554974 TMEM242Q9NWH2 141 aa9.81□□□□□ -0.84
XRCC3-210ENST00000554974 TRBV6-5A0A0K0K1A5 114 aa9.8□□□□□ -0.84
XRCC3-210ENST00000554974 S100A8P05109 93 aa9.8□□□□□ -0.84
XRCC3-210ENST00000554974 ELOBQ15370 118 aa9.8□□□□□ -0.84
XRCC3-210ENST00000554974 RHEBQ15382 184 aa9.8□□□□□ -0.84
XRCC3-210ENST00000554974 MRPL54Q6P161 138 aaKnown RBP9.8□□□□□ -0.84
XRCC3-210ENST00000554974 KCNIP4Q6PIL6 250 aa9.8□□□□□ -0.84
XRCC3-210ENST00000554974 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
XRCC3-210ENST00000554974 A0A087WX48 190 aa9.79□□□□□ -0.84
XRCC3-210ENST00000554974 TRBV6-8A0A0A6YYG3 113 aa9.79□□□□□ -0.84
XRCC3-210ENST00000554974 CAMPP49913 170 aa9.79□□□□□ -0.84
XRCC3-210ENST00000554974 TMEM97Q5BJF2 176 aa9.79□□□□□ -0.84
XRCC3-210ENST00000554974 FAM104BQ5XKR9 115 aa9.79□□□□□ -0.84
XRCC3-210ENST00000554974 CLRN3Q8NCR9 226 aa9.79□□□□□ -0.84
XRCC3-210ENST00000554974 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
XRCC3-210ENST00000554974 C7orf77A4D0Y5 90 aa9.78□□□□□ -0.84
XRCC3-210ENST00000554974 GAS8-AS1O95177 125 aa9.78□□□□□ -0.84
XRCC3-210ENST00000554974 OXTP01178 125 aa9.78□□□□□ -0.84
XRCC3-210ENST00000554974 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
XRCC3-210ENST00000554974 BTF3L4Q96K17 158 aa9.78□□□□□ -0.84
XRCC3-210ENST00000554974 PLA2G2DQ9UNK4 145 aa9.78□□□□□ -0.84
XRCC3-210ENST00000554974 TRAV9-1A0A075B6T8 112 aa9.77□□□□□ -0.85
XRCC3-210ENST00000554974 PKIAP61925 76 aa9.77□□□□□ -0.85
XRCC3-210ENST00000554974 ATRAIDQ6UW56 229 aa9.77□□□□□ -0.85
XRCC3-210ENST00000554974 HNRNPA3P51991 378 aaKnown RBP9.76□□□□□ -0.85
XRCC3-210ENST00000554974 IQCJQ1A5X6 159 aa9.76□□□□□ -0.85
XRCC3-210ENST00000554974 MRPL51Q4U2R6 128 aaKnown RBP9.76□□□□□ -0.85
XRCC3-210ENST00000554974 SVBPQ8N300 66 aa9.76□□□□□ -0.85
XRCC3-210ENST00000554974 NRACQ8N912 160 aa9.76□□□□□ -0.85
XRCC3-210ENST00000554974 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
XRCC3-210ENST00000554974 APOC3P02656 99 aa9.75□□□□□ -0.85
XRCC3-210ENST00000554974 RPS10P46783 165 aaKnown RBP9.75□□□□□ -0.85
XRCC3-210ENST00000554974 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
XRCC3-210ENST00000554974 Q0VG73 95 aa9.75□□□□□ -0.85
XRCC3-210ENST00000554974 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
XRCC3-210ENST00000554974 C1orf43Q9BWL3 253 aa9.75□□□□□ -0.85
XRCC3-210ENST00000554974 NCR2O95944 276 aa9.74□□□□□ -0.85
XRCC3-210ENST00000554974 PPP1R17O96001 155 aa9.74□□□□□ -0.85
XRCC3-210ENST00000554974 POLR2KP53803 58 aaKnown RBP9.74□□□□□ -0.85
XRCC3-210ENST00000554974 ENHOQ6UWT2 76 aa9.74□□□□□ -0.85
XRCC3-210ENST00000554974 TRBV24-1A0A075B6N3 115 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 TRBV25-1A0A075B6N4 114 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 IGHV1-24A0A0C4DH33 117 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 TMEM262E9PQX1 116 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 SMKR1H3BMG3 65 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 SNAPINO95295 136 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 HLA-DQA1P01909 254 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 C14orf177Q52M58 125 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 MPV17L2Q567V2 206 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 SLC7A5P1Q8MH63 180 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 ST20Q9HBF5 79 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 RPS10P5Q9NQ39 176 aa9.73□□□□□ -0.85
XRCC3-210ENST00000554974 PKHD1L1Q86WI1 4243 aa9.72□□□□□ -0.85
XRCC3-210ENST00000554974 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
XRCC3-210ENST00000554974 USP17L23D6RBM5 183 aa9.72□□□□□ -0.85
XRCC3-210ENST00000554974 CRPP02741 224 aa9.72□□□□□ -0.85
XRCC3-210ENST00000554974 PPBPP02775 128 aa9.72□□□□□ -0.85
XRCC3-210ENST00000554974 COTL1Q14019 142 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms