RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 TMEM2Q9UHN6 1383 aa-0.59□□□□□ -2.5
CFAP54-207ENST00000554821 FAT1Q14517 4588 aa-0.6□□□□□ -2.5
CFAP54-207ENST00000554821 TRAV22A0A0B4J277 110 aa-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 IFNA17P01571 189 aa-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 SPRR1AP35321 89 aa-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 RRAS2P62070 204 aaPredicted RBP-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 Q5VSD8 79 aa-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 ZNF818PQ6ZRF7 136 aa-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 PSMG3Q9BT73 122 aaPredicted RBP-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 SCN3BQ9NY72 215 aa-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 PPRC1Q5VV67 1664 aaKnown RBP-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 ATRQ13535 2644 aa-0.6□□□□□ -2.51
CFAP54-207ENST00000554821 NBEAL1Q6ZS30 2694 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 SETXQ7Z333 2677 aaKnown RBP-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 SPTA1P02549 2419 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 M0R2Z0 102 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 NPFFO15130 113 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 BCE1O60756 84 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 NCR2O95944 276 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 CBLN1P23435 193 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 HAMPP81172 84 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 SPAG11BQ08648 103 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 AKAP14Q86UN6 197 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 PYDC1Q8WXC3 89 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 GSKIPQ9P0R6 139 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 COL6A3P12111 3177 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 LAMA5O15230 3695 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 LAMC1P11047 1609 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 PLXNB2O15031 1838 aa-0.61□□□□□ -2.51
CFAP54-207ENST00000554821 HIVEP1P15822 2718 aa-0.62□□□□□ -2.51
CFAP54-207ENST00000554821 J3QR89 54 aa-0.62□□□□□ -2.51
CFAP54-207ENST00000554821 K7ERU9 68 aa-0.62□□□□□ -2.51
CFAP54-207ENST00000554821 PIPP12273 146 aaPredicted RBP-0.62□□□□□ -2.51
CFAP54-207ENST00000554821 CCL18P55774 89 aa-0.62□□□□□ -2.51
CFAP54-207ENST00000554821 SPTSSAQ969W0 71 aa-0.62□□□□□ -2.51
CFAP54-207ENST00000554821 NPVFQ9HCQ7 196 aa-0.62□□□□□ -2.51
CFAP54-207ENST00000554821 DAPK1P53355 1430 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 CASKIN1Q8WXD9 1431 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 RYR3Q15413 4870 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 SNCGO76070 127 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 NDUFB6O95139 128 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 DR1Q01658 176 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 Q8IZM0 81 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 ACANP16112 2415 aa-0.63□□□□□ -2.51
CFAP54-207ENST00000554821 ZNF609O15014 1411 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 SMIM6P0DI80 62 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 CCL8P80075 99 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 TSTD1Q8NFU3 115 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 SDF2Q99470 211 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 AGPAT4-IT1Q9H0P7 198 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 LRRC37A3O60309 1634 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 FHAD1B1AJZ9 1412 aa-0.64□□□□□ -2.51
CFAP54-207ENST00000554821 WNK3Q9BYP7 1800 aa-0.65□□□□□ -2.51
CFAP54-207ENST00000554821 SCIMPQ6UWF3 145 aa-0.65□□□□□ -2.51
CFAP54-207ENST00000554821 SEC11CQ9BY50 192 aa-0.65□□□□□ -2.51
CFAP54-207ENST00000554821 STAB2Q8WWQ8 2551 aa-0.65□□□□□ -2.51
CFAP54-207ENST00000554821 CHD8Q9HCK8 2581 aa-0.65□□□□□ -2.51
CFAP54-207ENST00000554821 MYO7BQ6PIF6 2116 aa-0.65□□□□□ -2.51
CFAP54-207ENST00000554821 MAP1AP78559 2803 aaPredicted RBP-0.65□□□□□ -2.51
CFAP54-207ENST00000554821 FLNBO75369 2602 aaKnown RBP-0.66□□□□□ -2.51
CFAP54-207ENST00000554821 LRP6O75581 1613 aa-0.66□□□□□ -2.51
CFAP54-207ENST00000554821 RYR1P21817 5038 aa-0.66□□□□□ -2.52
CFAP54-207ENST00000554821 PPP1R17O96001 155 aa-0.66□□□□□ -2.52
CFAP54-207ENST00000554821 SPCS1Q9Y6A9 102 aa-0.66□□□□□ -2.52
CFAP54-207ENST00000554821 KDM3BQ7LBC6 1761 aa-0.66□□□□□ -2.52
CFAP54-207ENST00000554821 C10orf71Q711Q0 1435 aa-0.66□□□□□ -2.52
CFAP54-207ENST00000554821 PRDM2Q13029 1718 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 PI4KAP42356 2102 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 HCG22E2RYF7 251 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 I3L2K1 104 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 M0R135 149 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 SIX6O95475 246 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 RPS25P62851 125 aaKnown RBP-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 ALX1Q15699 326 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 KCNRGQ8N5I3 272 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 TPT1P8Q9HAU6 139 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 ZNF236Q9UL36 1845 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 HYDINQ4G0P3 5121 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 EP300Q09472 2414 aaPredicted RBP-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 SETD2Q9BYW2 2564 aaPredicted RBP-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 MRC1P22897 1456 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 IFT140Q96RY7 1462 aa-0.67□□□□□ -2.52
CFAP54-207ENST00000554821 USH2AO75445 5202 aa-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 GUCA1AP43080 201 aaPredicted RBP-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 COPZ1P61923 177 aa-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 LZICQ8WZA0 190 aa-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 ANP32BQ92688 251 aaKnown RBP-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 DPH3Q96FX2 82 aa-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 GOLGA4Q13439 2230 aaKnown RBP-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 MYH8P13535 1937 aa-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 ZNF518AQ6AHZ1 1483 aa-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 URB1O60287 2271 aaKnown RBP-0.68□□□□□ -2.52
CFAP54-207ENST00000554821 RBM3P98179 157 aaKnown RBP-0.69□□□□□ -2.52
CFAP54-207ENST00000554821 SMIM21Q3B7S5 101 aa-0.69□□□□□ -2.52
CFAP54-207ENST00000554821 TP53AIP1Q9HCN2 124 aa-0.69□□□□□ -2.52
CFAP54-207ENST00000554821 COPZ2Q9P299 210 aa-0.69□□□□□ -2.52
CFAP54-207ENST00000554821 R4GMQ9 66 aa-0.69□□□□□ -2.52
CFAP54-207ENST00000554821 BCL9LQ86UU0 1499 aa-0.69□□□□□ -2.52
CFAP54-207ENST00000554821 PXDNQ92626 1479 aa-0.69□□□□□ -2.52
CFAP54-207ENST00000554821 PKHD1P08F94 4074 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms