RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 C10orf128Q5T292 105 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 GDF5OSQ5U4N7 250 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 ZNF497Q6ZNH5 498 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 PHF5AQ7RTV0 110 aaKnown RBP3.25□□□□□ -1.89
ATXN3-227ENST00000554491 MDP1Q86V88 176 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 Q8N2B8 174 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 Q8N8P6 123 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 TMEM75Q8N9X5 138 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 VSIG2Q96IQ7 327 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 METTL26Q96S19 204 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 SLC50A1Q9BRV3 221 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 SLC25A22Q9H936 323 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 TRBV7-1A0A0A6YYK4 115 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 IBA57-AS1B1ANH7 110 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 PRAC2D3DTV9 90 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 H3BP45 60 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 CKS2P33552 79 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 IFI27P40305 119 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-227ENST00000554491 RPS27P42677 84 aaKnown RBP3.24□□□□□ -1.89
ATXN3-227ENST00000554491 CRIP2P52943 208 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-227ENST00000554491 CACNG7P62955 275 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 KISS1Q15726 138 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 TMEM30BQ3MIR4 351 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 FAM222AQ5U5X8 452 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 LCA10Q71F78 164 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 CD177Q8N6Q3 437 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 MAPK1IP1LQ8NDC0 245 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 NUP37Q8NFH4 326 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 CCL17Q92583 94 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 SPTSSAQ969W0 71 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 ZNF524Q96C55 264 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 C1orf147Q96MC9 270 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-227ENST00000554491 SPACA5Q96QH8 159 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 CCL19Q99731 98 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 Q9H3A6 140 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 PSENENQ9NZ42 101 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 LHFPL6Q9Y693 200 aa3.24□□□□□ -1.89
ATXN3-227ENST00000554491 IGLV5-37A0A075B6J1 123 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 TRAV3A0A0B4J244 114 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 TEX49A0A1B0GTD5 131 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 F6UB75 175 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 ZNF73O43830 326 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-227ENST00000554491 FCER1GP30273 86 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 XCL1P47992 114 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 SS18Q15532 418 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 FAM27BQ5VT28 67 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 MALRD1Q5VYJ5 2156 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 C2orf82Q6UX34 121 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 DAND5Q8N907 189 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 RNASE6Q93091 150 aaKnown RBP3.23□□□□□ -1.89
ATXN3-227ENST00000554491 TOMM6Q96B49 74 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 GFRA4Q9GZZ7 299 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 XCL2Q9UBD3 114 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 CTSZQ9UBR2 303 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 PRO1854Q9UHT4 67 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 LINC00588Q9Y4M8 146 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 FAM215AQ9Y5M1 114 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 KIAA1549Q9HCM3 1950 aa3.23□□□□□ -1.89
ATXN3-227ENST00000554491 IGHV1-45A0A0A0MS14 117 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 A0A0A6YYD4 124 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 IGKV1D-43A0A0B4J1Z2 117 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 IGKV1-9A0A0C4DH69 117 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 RBMY1BA6NDE4 496 aaKnown RBP3.22□□□□□ -1.89
ATXN3-227ENST00000554491 RBMY1EA6NEQ0 496 aaKnown RBP3.22□□□□□ -1.89
ATXN3-227ENST00000554491 H7BZZ5 65 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 RBMY1DP0C7P1 496 aaKnown RBP3.22□□□□□ -1.89
ATXN3-227ENST00000554491 CFC1BP0CG36 223 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 CFC1P0CG37 223 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 RBMY1A1P0DJD3 496 aaKnown RBP3.22□□□□□ -1.89
ATXN3-227ENST00000554491 RBMY1CP0DJD4 496 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 RBM3P98179 157 aaKnown RBP3.22□□□□□ -1.89
ATXN3-227ENST00000554491 RBMY1FQ15415 496 aaKnown RBP3.22□□□□□ -1.89
ATXN3-227ENST00000554491 FBXL19-AS1Q494R0 122 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 Q6JHZ5 121 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 Q6ZVQ6 151 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 MKXQ8IYA7 352 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-227ENST00000554491 ARHGAP5-AS1Q96IT6 56 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 DEFB126Q9BYW3 111 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 TMEM167BQ9NRX6 74 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 MED12Q93074 2177 aa3.22□□□□□ -1.89
ATXN3-227ENST00000554491 SCN3AQ9NY46 2000 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 IGKV2D-26A0A0A0MRZ7 120 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 TRBV30A0A0K0K1B3 111 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 IQCF6A8MYZ5 107 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 TMEM256-PLSCR3K7ERE1 68 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 M0R135 149 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 IGLV2-8P01709 118 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF80P51504 273 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-227ENST00000554491 UBE2BP63146 152 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 KLKP1Q107X0 134 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 NSUN5P1Q3KNT7 163 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 PAPPA-AS1Q5QFB9 102 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 SPINK14Q6IE38 97 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 CLEC19AQ6UXS0 136 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 Q6ZR03 302 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 MAPKAPK5-AS1Q8N8E1 139 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms