RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TP53TG1Q9Y2A0 90 aa9.12□□□□□ -0.95
SHMT2-207ENST00000553837 TEX49A0A1B0GTD5 131 aa9.11□□□□□ -0.95
SHMT2-207ENST00000553837 AMELXQ99217 191 aa9.11□□□□□ -0.95
SHMT2-207ENST00000553837 ZNF462Q96JM2 2506 aa9.11□□□□□ -0.95
SHMT2-207ENST00000553837 H3BMM0 161 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 H7C2G1 150 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 LGALS9O00182 355 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 OVOL1O14753 267 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 HERVK_113P63121 156 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 Q1RN00 199 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 ANKRD17O75179 2603 aaKnown RBP9.1□□□□□ -0.95
SHMT2-207ENST00000553837 MED14OSP0DP75 135 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 MXRA5Q9NR99 2828 aa9.1□□□□□ -0.95
SHMT2-207ENST00000553837 TRAV21A0A0B4J279 112 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 F5H768 121 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 GNRH2O43555 120 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 PSMB8P28062 276 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 RNASE4P34096 147 aaKnown RBP9.09□□□□□ -0.95
SHMT2-207ENST00000553837 DAZ1Q9NQZ3 744 aaKnown RBP9.09□□□□□ -0.95
SHMT2-207ENST00000553837 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 LEPROTO15243 131 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-207ENST00000553837 ZNF876PQ49A33 203 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 MUSTN1Q8IVN3 82 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 POM121L12Q8N7R1 296 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 DUX5Q96PT3 197 aa9.09□□□□□ -0.95
SHMT2-207ENST00000553837 VCYO14598 125 aa9.08□□□□□ -0.96
SHMT2-207ENST00000553837 APRG1Q8IVJ8 170 aa9.08□□□□□ -0.96
SHMT2-207ENST00000553837 LINC01356Q8N9X3 169 aa9.08□□□□□ -0.96
SHMT2-207ENST00000553837 UBR5O95071 2799 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-207ENST00000553837 IGHV4OR15-8A0A075B7B6 117 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 A0A087WW49 117 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 F8WDY8 70 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 PLA2G2AP14555 144 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 DSCR9P59020 149 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 KRTAP10-9P60411 292 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 C2orf82Q6UX34 121 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 LRRK2Q5S007 2527 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 DCANP1Q8TF63 244 aa9.07□□□□□ -0.96
SHMT2-207ENST00000553837 J3QKU1 62 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 ELANEP08246 267 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 RNASE3P12724 160 aaKnown RBP9.06□□□□□ -0.96
SHMT2-207ENST00000553837 POLR2KP53803 58 aaKnown RBP9.06□□□□□ -0.96
SHMT2-207ENST00000553837 C3orf56Q8N813 242 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 ZNF580Q9UK33 172 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 MUC4Q99102 2169 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 K7EMT4 169 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
SHMT2-207ENST00000553837 KIR2DL5BQ8NHK3 375 aa9.06□□□□□ -0.96
SHMT2-207ENST00000553837 DOPEY2Q9Y3R5 2298 aa9.05□□□□□ -0.96
SHMT2-207ENST00000553837 H3BT86 120 aa9.05□□□□□ -0.96
SHMT2-207ENST00000553837 ZNF56Q15929 161 aa9.05□□□□□ -0.96
SHMT2-207ENST00000553837 BEX4Q9NWD9 120 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-207ENST00000553837 A0A0J9YX75 114 aa9.05□□□□□ -0.96
SHMT2-207ENST00000553837 TRIAP1O43715 76 aa9.05□□□□□ -0.96
SHMT2-207ENST00000553837 PTPN13Q12923 2485 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 ZNF469Q96JG9 3925 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-207ENST00000553837 FAM236AA0A1B0GUQ0 79 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 SDHAF1A6NFY7 115 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 KLLNB2CW77 178 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 H7C423 109 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 COX6CP09669 75 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 CRYGAP11844 174 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 CR1P17927 2039 aa9.04□□□□□ -0.96
SHMT2-207ENST00000553837 DEFB121Q5J5C9 76 aa9.03□□□□□ -0.96
SHMT2-207ENST00000553837 KIF25-AS1Q9Y6Z4 181 aa9.03□□□□□ -0.96
SHMT2-207ENST00000553837 FSHBP01225 129 aa9.03□□□□□ -0.96
SHMT2-207ENST00000553837 ACYP1P07311 99 aa9.03□□□□□ -0.96
SHMT2-207ENST00000553837 LINC00315P59091 139 aa9.03□□□□□ -0.96
SHMT2-207ENST00000553837 ABCA12Q86UK0 2595 aa9.03□□□□□ -0.96
SHMT2-207ENST00000553837 TEX15Q9BXT5 2789 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 TRGV11A0A075B6L2 103 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 NXPH4O95158 308 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 IGHV4-31P0DP07 118 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 JPT2Q9H910 190 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 TRBV27A0A0K0K1C4 114 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 J3QLI3 93 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 SUMO4Q6EEV6 95 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 DUX3Q96PT4 197 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 ZNF702PQ9H963 129 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 ICOSQ9Y6W8 199 aa9.02□□□□□ -0.97
SHMT2-207ENST00000553837 NBPF19A0A087WUL8 3843 aa9.01□□□□□ -0.97
SHMT2-207ENST00000553837 TRAV12-3A0A0B4J271 114 aa9.01□□□□□ -0.97
SHMT2-207ENST00000553837 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
SHMT2-207ENST00000553837 COX7CP15954 63 aa9.01□□□□□ -0.97
SHMT2-207ENST00000553837 SYNJ2BPP57105 145 aa9.01□□□□□ -0.97
SHMT2-207ENST00000553837 F5H697 171 aa9□□□□□ -0.97
SHMT2-207ENST00000553837 IGKV3-20P01619 116 aa9□□□□□ -0.97
SHMT2-207ENST00000553837 Q6YL49 198 aa9□□□□□ -0.97
SHMT2-207ENST00000553837 DEFB104AQ8WTQ1 72 aa9□□□□□ -0.97
SHMT2-207ENST00000553837 TRBV6-5A0A0K0K1A5 114 aa9□□□□□ -0.97
SHMT2-207ENST00000553837 ZNF22P17026 224 aaPredicted RBP9□□□□□ -0.97
SHMT2-207ENST00000553837 TMEM258P61165 79 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms