RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ODAMA1E959 279 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 C7orf71A4D174 169 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 A6NIN4 97 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 IFNA14P01570 189 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 GYPBP06028 91 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 G6PCP35575 357 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 ATP5G3P48201 142 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 SELENOWP63302 87 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 ELOBQ15370 118 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 LTC4SQ16873 150 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 DEFB135Q30KP9 77 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 LCN15Q6UWW0 184 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 DHFR2Q86XF0 187 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 OR2T10Q8NGZ9 312 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 CGREF1Q99674 301 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 YIPF3Q9GZM5 350 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 SH3BGRL3Q9H299 93 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 EPDR1Q9UM22 224 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 AMMECR1Q9Y4X0 333 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-210ENST00000553693 NUBP2Q9Y5Y2 271 aa1.42□□□□□ -2.18
SCFD1-210ENST00000553693 TRAV4A0A0B4J268 109 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 A0A0G2JQZ4 141 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 DEFB4AO15263 64 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 PGLYRP1O75594 196 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-210ENST00000553693 OR2H2O95918 312 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 IFNA21P01568 189 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 IGLV3-1P01715 115 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 APOC1P02654 83 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 IFNA4P05014 189 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 AKR1C3P42330 323 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 AQP4P55087 323 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 TPPP2P59282 170 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 DEFA5Q01523 94 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 ZNF345Q14585 488 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 SS18Q15532 418 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 WHAMMP3Q1A5X7 153 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 RRN3P1Q2M238 152 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 DEFB114Q30KQ6 69 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 LINC01554Q52M75 96 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 LINC01590Q5TEZ4 76 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 EIF5AL1Q6IS14 154 aaKnown RBP1.41□□□□□ -2.18
SCFD1-210ENST00000553693 SLC25A26Q70HW3 274 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 SMIM20Q8N5G0 67 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 THEM6Q8WUY1 208 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 MBD3L1Q8WWY6 194 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 HOPXQ9BPY8 73 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-210ENST00000553693 FAM103A1Q9BTL3 118 aaKnown RBP1.41□□□□□ -2.18
SCFD1-210ENST00000553693 TIMM21Q9BVV7 248 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 C6orf62Q9GZU0 229 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-210ENST00000553693 PBOV1Q9GZY1 135 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 MIXL1Q9H2W2 232 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 TP73-AS1Q9UF72 201 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 SS18L2Q9UHA2 77 aa1.41□□□□□ -2.18
SCFD1-210ENST00000553693 H0YJX3 145 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 FXYD1O00168 92 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 TAX1BP3O14907 124 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 DEGS1O15121 323 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 CRPP02741 224 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 CSN2P05814 226 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 FUSP35637 526 aaKnown RBP eCLIP1.4□□□□□ -2.19
SCFD1-210ENST00000553693 CDK5R1Q15078 307 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 KISS1Q15726 138 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 UNQ5815/PRO19632Q6UWF5 114 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 C12orf45Q8N5I9 185 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-210ENST00000553693 OTOSQ8NHW6 89 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 CANT1Q8WVQ1 401 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 CCDC32Q9BV29 185 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 CST11Q9H112 138 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 TAS2R4Q9NYW5 299 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 PRO2289Q9P1D8 64 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 V9GYS6 101 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 RNF213Q63HN8 5207 aa1.4□□□□□ -2.19
SCFD1-210ENST00000553693 VPS13BQ7Z7G8 4022 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 TRAV14DV4A0A0A6YYC5 116 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 IGKV1-9A0A0C4DH69 117 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 MAP1LC3B2A6NCE7 125 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 C2orf70A6NJV1 201 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 TMEM212A6NML5 194 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 ZNF705FA8MVS1 300 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-210ENST00000553693 NDUFA3O95167 84 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 GADD45GO95257 159 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 NAPSAO96009 420 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 C1QBP02746 253 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 RPSAP08865 295 aaKnown RBP1.39□□□□□ -2.19
SCFD1-210ENST00000553693 CBLN1P23435 193 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 S100GP29377 79 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 ZNF137PP52743 207 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 CRYBA4P53673 196 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 B2MP61769 119 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 UBE2BP63146 152 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 C1orf134Q5TEV5 83 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 Q5VSD8 79 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 Q8IYB0 196 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 LINC00311Q8N616 119 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 TCTEX1D1Q8N7M0 179 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 OR8J3Q8NGG0 315 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 RNASE11Q8TAA1 199 aaKnown RBP1.39□□□□□ -2.19
SCFD1-210ENST00000553693 TEX47Q8TBZ9 253 aa1.39□□□□□ -2.19
SCFD1-210ENST00000553693 DYNLRB2Q8TF09 96 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms