RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 HIST1H2BOP23527 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST1H2BBP33778 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST1H2BDP58876 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST1H2BCP62807 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 Q0VG73 95 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST2H2BEQ16778 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 TMEM97Q5BJF2 176 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST1H2BHQ93079 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST1H2BNQ99877 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 HIST1H2BMQ99879 126 aa12.57□□□□□ -0.4
UBR7-202ENST00000553674 NXT2Q9NPJ8 142 aaKnown RBP12.57□□□□□ -0.4
UBR7-202ENST00000553674 ALMS1Q8TCU4 4167 aa12.56□□□□□ -0.4
UBR7-202ENST00000553674 LYSTQ99698 3801 aa12.56□□□□□ -0.4
UBR7-202ENST00000553674 IGHV1-24A0A0C4DH33 117 aa12.56□□□□□ -0.4
UBR7-202ENST00000553674 NIT1Q86X76 327 aa12.56□□□□□ -0.4
UBR7-202ENST00000553674 PRSS3P2Q8NHM4 247 aa12.56□□□□□ -0.4
UBR7-202ENST00000553674 KIR2DL4Q99706 377 aa12.56□□□□□ -0.4
UBR7-202ENST00000553674 AMTP48728 403 aa12.55□□□□□ -0.4
UBR7-202ENST00000553674 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
UBR7-202ENST00000553674 UPK3BQ9BT76 320 aa12.55□□□□□ -0.4
UBR7-202ENST00000553674 TRBV25-1A0A075B6N4 114 aa12.54□□□□□ -0.4
UBR7-202ENST00000553674 FCER1GP30273 86 aa12.54□□□□□ -0.4
UBR7-202ENST00000553674 LINC00310P59036 64 aa12.54□□□□□ -0.4
UBR7-202ENST00000553674 LGALS9CQ6DKI2 356 aa12.54□□□□□ -0.4
UBR7-202ENST00000553674 C1orf196B1AJZ1 125 aa12.53□□□□□ -0.4
UBR7-202ENST00000553674 TMEM243Q9BU79 118 aa12.53□□□□□ -0.4
UBR7-202ENST00000553674 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.52□□□□□ -0.41
UBR7-202ENST00000553674 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
UBR7-202ENST00000553674 IGKV2-29A2NJV5 120 aaPredicted RBP12.52□□□□□ -0.41
UBR7-202ENST00000553674 LINC00614P0C842 121 aa12.52□□□□□ -0.41
UBR7-202ENST00000553674 Q8N3U1 123 aa12.52□□□□□ -0.41
UBR7-202ENST00000553674 C20orf203Q8NBC4 194 aa12.52□□□□□ -0.41
UBR7-202ENST00000553674 K7EMI3 77 aa12.51□□□□□ -0.41
UBR7-202ENST00000553674 GAGE6Q13070 117 aa12.51□□□□□ -0.41
UBR7-202ENST00000553674 LAGE3Q14657 143 aa12.51□□□□□ -0.41
UBR7-202ENST00000553674 FA2HQ7L5A8 372 aa12.51□□□□□ -0.41
UBR7-202ENST00000553674 UBE2DNLQ8IWF7 75 aa12.51□□□□□ -0.41
UBR7-202ENST00000553674 LINC00476Q8WZB0 136 aa12.51□□□□□ -0.41
UBR7-202ENST00000553674 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
UBR7-202ENST00000553674 NUPR1O60356 82 aa12.5□□□□□ -0.41
UBR7-202ENST00000553674 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
UBR7-202ENST00000553674 RPL39P62891 51 aaKnown RBP12.49□□□□□ -0.41
UBR7-202ENST00000553674 ORMDL2Q53FV1 153 aa12.49□□□□□ -0.41
UBR7-202ENST00000553674 RNASEKQ6P5S7 137 aaKnown RBP12.49□□□□□ -0.41
UBR7-202ENST00000553674 Q9H8V8 135 aa12.49□□□□□ -0.41
UBR7-202ENST00000553674 A0A096LNJ9 63 aa12.48□□□□□ -0.41
UBR7-202ENST00000553674 SIVA1O15304 175 aa12.48□□□□□ -0.41
UBR7-202ENST00000553674 SERF1AO75920 110 aa12.48□□□□□ -0.41
UBR7-202ENST00000553674 DNAH10OSP0CZ25 163 aa12.48□□□□□ -0.41
UBR7-202ENST00000553674 RAB5BP61020 215 aa12.48□□□□□ -0.41
UBR7-202ENST00000553674 AP5S1Q9NUS5 200 aa12.48□□□□□ -0.41
UBR7-202ENST00000553674 H7C423 109 aa12.47□□□□□ -0.41
UBR7-202ENST00000553674 MPV17L2Q567V2 206 aa12.47□□□□□ -0.41
UBR7-202ENST00000553674 FAM104AQ969W3 186 aa12.47□□□□□ -0.41
UBR7-202ENST00000553674 CHCHD1Q96BP2 118 aaKnown RBP12.47□□□□□ -0.41
UBR7-202ENST00000553674 TMEM262E9PQX1 116 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 LY6G6CO95867 125 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 IGHV3-30P01768 117 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 IGHV3-33P01772 117 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 IGHV3-30-3P0DP02 117 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 IGHV3-30-5P0DP03 117 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 FGF6P10767 208 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 RBX1P62877 108 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 LINC01556Q5JQF7 62 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 COA6Q5JTJ3 125 aaKnown RBP12.46□□□□□ -0.41
UBR7-202ENST00000553674 C2orf66Q6UXQ4 117 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 MRPL52Q86TS9 123 aaKnown RBP12.46□□□□□ -0.41
UBR7-202ENST00000553674 Q8N976 141 aa12.46□□□□□ -0.41
UBR7-202ENST00000553674 SACSQ9NZJ4 4579 aa12.46□□□□□ -0.42
UBR7-202ENST00000553674 IGLV4-60A0A075B6I1 120 aa12.45□□□□□ -0.42
UBR7-202ENST00000553674 PMCHL1Q16048 86 aa12.45□□□□□ -0.42
UBR7-202ENST00000553674 UBE2D4Q9Y2X8 147 aa12.45□□□□□ -0.42
UBR7-202ENST00000553674 DNAH6Q9C0G6 4158 aa12.44□□□□□ -0.42
UBR7-202ENST00000553674 A0A1B0GUV1 79 aa12.44□□□□□ -0.42
UBR7-202ENST00000553674 UBE2L6O14933 153 aa12.44□□□□□ -0.42
UBR7-202ENST00000553674 NDUFA6P56556 154 aa12.44□□□□□ -0.42
UBR7-202ENST00000553674 TOMM6Q96B49 74 aa12.44□□□□□ -0.42
UBR7-202ENST00000553674 TIMM21Q9BVV7 248 aa12.44□□□□□ -0.42
UBR7-202ENST00000553674 KRTAP1-5Q9BYS1 174 aa12.44□□□□□ -0.42
UBR7-202ENST00000553674 BTF3P20290 206 aaKnown RBP12.43□□□□□ -0.42
UBR7-202ENST00000553674 CYSLTR1Q9Y271 337 aa12.43□□□□□ -0.42
UBR7-202ENST00000553674 A0A087WX48 190 aa12.42□□□□□ -0.42
UBR7-202ENST00000553674 LCE6AA0A183 80 aa12.42□□□□□ -0.42
UBR7-202ENST00000553674 IGIPA6NJ69 53 aa12.42□□□□□ -0.42
UBR7-202ENST00000553674 FAM19A2Q8N3H0 131 aa12.42□□□□□ -0.42
UBR7-202ENST00000553674 TMEM18Q96B42 140 aa12.42□□□□□ -0.42
UBR7-202ENST00000553674 OPRPNQ99935 248 aaPredicted RBP12.42□□□□□ -0.42
UBR7-202ENST00000553674 PKIAP61925 76 aa12.41□□□□□ -0.42
UBR7-202ENST00000553674 PDZD11Q5EBL8 140 aa12.41□□□□□ -0.42
UBR7-202ENST00000553674 AMMECR1LQ6DCA0 310 aa12.41□□□□□ -0.42
UBR7-202ENST00000553674 PYGO1Q9Y3Y4 419 aa12.41□□□□□ -0.42
UBR7-202ENST00000553674 CSDC2Q9Y534 153 aaKnown RBP12.41□□□□□ -0.42
UBR7-202ENST00000553674 HSBP1O75506 76 aa12.4□□□□□ -0.42
UBR7-202ENST00000553674 HBDP02042 147 aa12.4□□□□□ -0.42
UBR7-202ENST00000553674 ZNF25P17030 456 aaPredicted RBP12.4□□□□□ -0.42
UBR7-202ENST00000553674 CDC42SE2Q9NRR3 84 aa12.4□□□□□ -0.42
UBR7-202ENST00000553674 SPANXA1Q9NS26 97 aa12.4□□□□□ -0.42
UBR7-202ENST00000553674 HYDINQ4G0P3 5121 aa12.39□□□□□ -0.43
UBR7-202ENST00000553674 NBDYA0A0U1RRE5 68 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms