RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 FCER1GP30273 86 aa6.97□□□□□ -1.29
TRAFD1-208ENST00000552890 SUMO2P61956 95 aaKnown RBP6.97□□□□□ -1.29
TRAFD1-208ENST00000552890 MIAQ16674 131 aa6.97□□□□□ -1.29
TRAFD1-208ENST00000552890 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
TRAFD1-208ENST00000552890 MRPL54Q6P161 138 aaKnown RBP6.97□□□□□ -1.29
TRAFD1-208ENST00000552890 AMN1Q8IY45 258 aa6.97□□□□□ -1.29
TRAFD1-208ENST00000552890 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
TRAFD1-208ENST00000552890 TRAV8-4A0A0B4J246 113 aa6.96□□□□□ -1.3
TRAFD1-208ENST00000552890 IGHV3-30P01768 117 aa6.96□□□□□ -1.3
TRAFD1-208ENST00000552890 IGHV3-33P01772 117 aa6.96□□□□□ -1.3
TRAFD1-208ENST00000552890 HLA-DQA1P01909 254 aa6.96□□□□□ -1.3
TRAFD1-208ENST00000552890 IGHV3-30-3P0DP02 117 aa6.96□□□□□ -1.3
TRAFD1-208ENST00000552890 IGHV3-30-5P0DP03 117 aa6.96□□□□□ -1.3
TRAFD1-208ENST00000552890 TRAV26-2A0A0B4J265 109 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 C7orf77A4D0Y5 90 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 LINC01549A6NIU2 74 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 RTL8CO15255 209 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 APOC3P02656 99 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 RAB5AP20339 215 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 POLR2KP53803 58 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 MRPL51Q4U2R6 128 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 C14orf177Q52M58 125 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 TMEM136Q6ZRR5 245 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 RNF185Q96GF1 192 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 TMEM70Q9BUB7 260 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 C1orf43Q9BWL3 253 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 RPS10P5Q9NQ39 176 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 Q9UF83 564 aa6.95□□□□□ -1.3
TRAFD1-208ENST00000552890 KMT2AQ03164 3969 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 DNAH1Q9P2D7 4330 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 CCL25O15444 150 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 ADCYAP1P18509 176 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 DGAT2L7PQ6IED9 249 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 GNB1LQ9BYB4 327 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 PGPEP1Q9NXJ5 209 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
TRAFD1-208ENST00000552890 TNFRSF6BO95407 300 aa6.93□□□□□ -1.3
TRAFD1-208ENST00000552890 ATRAIDQ6UW56 229 aa6.93□□□□□ -1.3
TRAFD1-208ENST00000552890 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
TRAFD1-208ENST00000552890 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
TRAFD1-208ENST00000552890 PRELID3AQ96N28 172 aa6.93□□□□□ -1.3
TRAFD1-208ENST00000552890 MAP1LC3AQ9H492 121 aa6.93□□□□□ -1.3
TRAFD1-208ENST00000552890 CSDC2Q9Y534 153 aaKnown RBP6.93□□□□□ -1.3
TRAFD1-208ENST00000552890 D6R8Y8 96 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 RBX1P62877 108 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 GAGE6Q13070 117 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 NTM-AS1Q6ZSK4 140 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 NRACQ8N912 160 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 Q8N976 141 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 KRTAP1-5Q9BYS1 174 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 Q9HAA7 133 aa6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 NXT2Q9NPJ8 142 aaKnown RBP6.92□□□□□ -1.3
TRAFD1-208ENST00000552890 PRSS47A8MTI9 375 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 ORMDL2Q53FV1 153 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 MPV17L2Q567V2 206 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 MRPL52Q86TS9 123 aaKnown RBP6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 OR5A1Q8NGJ0 315 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 SMIM2Q9BVW6 85 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 PRR34Q9NV39 138 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 VPS13DQ5THJ4 4388 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 SACSQ9NZJ4 4579 aa6.91□□□□□ -1.3
TRAFD1-208ENST00000552890 IGKV2D-24A0A075B6R9 120 aa6.9□□□□□ -1.3
TRAFD1-208ENST00000552890 FGF6P10767 208 aa6.9□□□□□ -1.3
TRAFD1-208ENST00000552890 ESDP10768 282 aa6.9□□□□□ -1.3
TRAFD1-208ENST00000552890 REG3AQ06141 175 aa6.9□□□□□ -1.3
TRAFD1-208ENST00000552890 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
TRAFD1-208ENST00000552890 RNASEKQ6P5S7 137 aaKnown RBP6.9□□□□□ -1.3
TRAFD1-208ENST00000552890 CFAP161Q6P656 301 aa6.9□□□□□ -1.3
TRAFD1-208ENST00000552890 TSHBP01222 138 aa6.89□□□□□ -1.31
TRAFD1-208ENST00000552890 NPSP0C0P6 89 aa6.89□□□□□ -1.31
TRAFD1-208ENST00000552890 RPS10P46783 165 aaKnown RBP6.89□□□□□ -1.31
TRAFD1-208ENST00000552890 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
TRAFD1-208ENST00000552890 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
TRAFD1-208ENST00000552890 SMCO4Q9NRQ5 59 aa6.89□□□□□ -1.31
TRAFD1-208ENST00000552890 SPANXA1Q9NS26 97 aa6.89□□□□□ -1.31
TRAFD1-208ENST00000552890 SMKR1H3BMG3 65 aa6.88□□□□□ -1.31
TRAFD1-208ENST00000552890 TNP2Q05952 138 aa6.88□□□□□ -1.31
TRAFD1-208ENST00000552890 A0A087WTM6 91 aa6.87□□□□□ -1.31
TRAFD1-208ENST00000552890 SS18Q15532 418 aa6.87□□□□□ -1.31
TRAFD1-208ENST00000552890 Q8N8P6 123 aa6.87□□□□□ -1.31
TRAFD1-208ENST00000552890 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
TRAFD1-208ENST00000552890 PKIGQ9Y2B9 76 aa6.87□□□□□ -1.31
TRAFD1-208ENST00000552890 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
TRAFD1-208ENST00000552890 A0A1B0GVY2 172 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 NPYP01303 97 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 IFI27P40305 119 aaPredicted RBP6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 RAB5BP61020 215 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 FABP9Q0Z7S8 132 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 ENHOQ6UWT2 76 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 Q6ZN92 141 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 ZNF664Q8N3J9 261 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 PRSS3P2Q8NHM4 247 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 PYGO1Q9Y3Y4 419 aa6.86□□□□□ -1.31
TRAFD1-208ENST00000552890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms