RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 TRGV1A0A0A0MS02 117 aa7.55□□□□□ -1.2
RFX4-210ENST00000552773 IGHV3-73A0A0B4J1V6 119 aa7.55□□□□□ -1.2
RFX4-210ENST00000552773 UBE2D1P51668 147 aa7.55□□□□□ -1.2
RFX4-210ENST00000552773 TIRAPP58753 221 aa7.55□□□□□ -1.2
RFX4-210ENST00000552773 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
RFX4-210ENST00000552773 FLNCQ14315 2725 aa7.55□□□□□ -1.2
RFX4-210ENST00000552773 USP9YO00507 2555 aaPredicted RBP7.55□□□□□ -1.2
RFX4-210ENST00000552773 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 K7EQD1 137 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 HERVK_113P63121 156 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 C1orf158Q8N1D5 194 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 LRRK2Q5S007 2527 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 CIRBPQ14011 172 aaKnown RBP7.54□□□□□ -1.2
RFX4-210ENST00000552773 CHCHD7Q9BUK0 85 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 GTSF1LQ9H1H1 148 aa7.54□□□□□ -1.2
RFX4-210ENST00000552773 COL12A1Q99715 3063 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 IGHV3OR16-12A0A075B7B8 117 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 A0A0J9YXV3 536 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 TRBV6-4A0A1B0GX49 114 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 K7ERJ3 54 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 TIMM17BO60830 172 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 PF4P02776 101 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 EMP1P54849 157 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 PROK1P58294 105 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 RNF183Q96D59 192 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 VPS25Q9BRG1 176 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 PGPEP1Q9NXJ5 209 aa7.53□□□□□ -1.2
RFX4-210ENST00000552773 PTPN13Q12923 2485 aa7.52□□□□□ -1.2
RFX4-210ENST00000552773 A0A0B4J2C4 111 aa7.52□□□□□ -1.21
RFX4-210ENST00000552773 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
RFX4-210ENST00000552773 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
RFX4-210ENST00000552773 GAGE13Q4V321 117 aa7.52□□□□□ -1.21
RFX4-210ENST00000552773 C11orf44Q8N8P7 122 aa7.52□□□□□ -1.21
RFX4-210ENST00000552773 OVOL2Q9BRP0 275 aa7.52□□□□□ -1.21
RFX4-210ENST00000552773 PRO1854Q9UHT4 67 aa7.52□□□□□ -1.21
RFX4-210ENST00000552773 UBE2L6O14933 153 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 IFITM1P13164 125 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 FAM19A3Q7Z5A8 133 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 DOPEY2Q9Y3R5 2298 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 TRGV2A0A075B6R0 118 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 SMIM9A6NGZ8 99 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 RBX1P62877 108 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 C10orf126Q8N4M7 172 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 VSIG2Q96IQ7 327 aa7.51□□□□□ -1.21
RFX4-210ENST00000552773 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
RFX4-210ENST00000552773 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
RFX4-210ENST00000552773 NAA38Q9BRA0 125 aaKnown RBP7.5□□□□□ -1.21
RFX4-210ENST00000552773 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
RFX4-210ENST00000552773 SPANXCQ9NY87 97 aa7.5□□□□□ -1.21
RFX4-210ENST00000552773 AGRNO00468 2067 aa7.5□□□□□ -1.21
RFX4-210ENST00000552773 ASH1LQ9NR48 2969 aaKnown RBP7.49□□□□□ -1.21
RFX4-210ENST00000552773 G3V4G9 280 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 APOMO95445 188 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 UBE2D3P61077 147 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 UBE2D2P62837 147 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 RNF151Q2KHN1 245 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 Q6ZSN1 163 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 TMEM243Q9BU79 118 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 NDUFA12Q9UI09 145 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 ERG28Q9UKR5 140 aa7.49□□□□□ -1.21
RFX4-210ENST00000552773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.48□□□□□ -1.21
RFX4-210ENST00000552773 TRGV4A0A0C4DH28 118 aa7.48□□□□□ -1.21
RFX4-210ENST00000552773 IGKV2-29A2NJV5 120 aaPredicted RBP7.48□□□□□ -1.21
RFX4-210ENST00000552773 C9orf66Q5T8R8 295 aa7.48□□□□□ -1.21
RFX4-210ENST00000552773 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
RFX4-210ENST00000552773 ATP6V0E2Q8NHE4 81 aa7.48□□□□□ -1.21
RFX4-210ENST00000552773 NOP10Q9NPE3 64 aaKnown RBP7.48□□□□□ -1.21
RFX4-210ENST00000552773 LOC107984156A0A0G2JMH3 177 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 ADARB2-AS1A8MUL3 147 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 COX6CP09669 75 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 SCGB1C2P0DMR2 95 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 TSPEAR-AS2P59090 65 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 HERV-K104P63124 156 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 Q6ZTI0 123 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 ARL17AQ8IVW1 177 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 KIR2DL5BQ8NHK3 375 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 DEFB104AQ8WTQ1 72 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 PPDPFQ9H3Y8 114 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 NDUFA1O15239 70 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 TSPAN13O95857 204 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 CFC1BP0CG36 223 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 CFC1P0CG37 223 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 Q6ZUT4 128 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
RFX4-210ENST00000552773 UTP20O75691 2785 aaKnown RBP7.46□□□□□ -1.22
RFX4-210ENST00000552773 H3BMG7 143 aa7.46□□□□□ -1.22
RFX4-210ENST00000552773 M0QXV9 152 aa7.46□□□□□ -1.22
RFX4-210ENST00000552773 RPL35AP18077 110 aaKnown RBP7.46□□□□□ -1.22
RFX4-210ENST00000552773 PSMB2P49721 201 aa7.46□□□□□ -1.22
RFX4-210ENST00000552773 MIAQ16674 131 aa7.46□□□□□ -1.22
RFX4-210ENST00000552773 IGHV3-38A0A0C4DH36 116 aa7.45□□□□□ -1.22
RFX4-210ENST00000552773 A4D1N5 150 aa7.45□□□□□ -1.22
RFX4-210ENST00000552773 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
RFX4-210ENST00000552773 LINC00482Q8N8I6 264 aa7.45□□□□□ -1.22
RFX4-210ENST00000552773 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms