RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 IGHV3-30-3P0DP02 117 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 IGHV3-30-5P0DP03 117 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 S100GP29377 79 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 SRIP30626 198 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 INPP1P49441 399 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 UBE2D3P61077 147 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 RPL37AP61513 92 aaKnown RBP1.37□□□□□ -2.19
CPSF6-207ENST00000551516 RRAS2P62070 204 aaPredicted RBP1.37□□□□□ -2.19
CPSF6-207ENST00000551516 RPL23P62829 140 aaKnown RBP1.37□□□□□ -2.19
CPSF6-207ENST00000551516 UBE2D2P62837 147 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 CACNG7P62955 275 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 IFITM3Q01628 133 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 SYCNQ0VAF6 134 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 LINC00483Q53H64 154 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 MPV17L2Q567V2 206 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 TMEM75Q8N9X5 138 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 SCGB3A2Q96PL1 93 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 CHCHD7Q9BUK0 85 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 NPCDR1Q9BY65 106 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 WFDC1Q9HC57 220 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 LYRM2Q9NU23 88 aaPredicted RBP1.37□□□□□ -2.19
CPSF6-207ENST00000551516 VAX2Q9UIW0 290 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 C14orf166Q9Y224 244 aaKnown RBP1.37□□□□□ -2.19
CPSF6-207ENST00000551516 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
CPSF6-207ENST00000551516 TRAV8-3A0A0A6YYJ7 113 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 A0A0U1RQV1 116 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 GGTLC3B5MD39 225 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 C9JCJ5 164 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 BPY2O14599 106 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 TAAR5O14804 337 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 SSSCA1O60232 199 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 CST7O76096 145 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 HLA-DQA1P01909 254 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 PFN1P07737 140 aaKnown RBP1.36□□□□□ -2.19
CPSF6-207ENST00000551516 MGST1P10620 155 aaKnown RBP1.36□□□□□ -2.19
CPSF6-207ENST00000551516 KRTAP5-9P26371 169 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 SULT1A1P50225 295 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 TMBIM6P55061 237 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 H2BFSP57053 126 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 C10orf113Q5VZT2 155 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 LINC00469Q8N7U9 141 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 ATP6V0E2Q8NHE4 81 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 TXNDC17Q9BRA2 123 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 SLC25A31Q9H0C2 315 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 CYTL1Q9NRR1 136 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 RSL24D1Q9UHA3 163 aaKnown RBP1.36□□□□□ -2.19
CPSF6-207ENST00000551516 PRO0461Q9UI25 63 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 SCP2D1Q9UJQ7 156 aa1.36□□□□□ -2.19
CPSF6-207ENST00000551516 TRGV4A0A0C4DH28 118 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 RBFOX3A6NFN3 312 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 FAM25AB3EWG3 89 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 FAM25CB3EWG5 89 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 FAM25GB3EWG6 89 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 KRBOX1C9JBD0 128 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 NDUFC2-KCTD14E9PQ53 114 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 G3V3Q6 166 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 UPK1BO75841 260 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 GPX1P07203 203 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 OR10J4P0C629 311 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 S100A11P31949 105 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 KRTAP12-2P59991 146 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 RPL18AQ02543 176 aaKnown RBP1.35□□□□□ -2.19
CPSF6-207ENST00000551516 AKR1C1Q04828 323 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 RHOHQ15669 191 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 IAH1Q2TAA2 248 aaPredicted RBP1.35□□□□□ -2.19
CPSF6-207ENST00000551516 ACOT6Q3I5F7 207 aaPredicted RBP1.35□□□□□ -2.19
CPSF6-207ENST00000551516 C5orf47Q569G3 176 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 KRTAP5-4Q6L8H1 288 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 OR5C1Q8NGR4 320 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 AP3S1Q92572 193 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 PPP1R14BQ96C90 147 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 SFRP2Q96HF1 295 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 DIRAS2Q96HU8 199 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 TMEM243Q9BU79 118 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 WDR61Q9GZS3 305 aaKnown RBP1.35□□□□□ -2.19
CPSF6-207ENST00000551516 VCX3BQ9H321 246 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 UQCC1Q9NVA1 299 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 IL36BQ9NZH7 164 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 OR5AC2Q9NZP5 309 aa1.35□□□□□ -2.19
CPSF6-207ENST00000551516 SYNE2Q8WXH0 6885 aaKnown RBP1.35□□□□□ -2.19
CPSF6-207ENST00000551516 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TRBV6-8A0A0A6YYG3 113 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 IGHV3-73A0A0B4J1V6 119 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TRAV21A0A0B4J279 112 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TRBV10-1A0A0K0K1A3 114 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TRBV6-1A0A0K0K1D8 114 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 A0A1W2PNN7 141 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 PGPA6NDG6 321 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 FABP12A6NFH5 140 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 KRTAP9-6A8MVA2 160 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 F6UZH7 168 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 COX7A2P2O60397 106 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TCRBP04435 133 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TCRAP04437 139 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 FGF7P21781 194 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 RANP62826 216 aaKnown RBP1.34□□□□□ -2.19
CPSF6-207ENST00000551516 RBX1P62877 108 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 GNG5P63218 68 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms