RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CHCHD7Q9BUK0 85 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 CSDC2Q9Y534 153 aaKnown RBP6.47□□□□□ -1.37
TMEM116-209ENST00000550020 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
TMEM116-209ENST00000550020 H7C423 109 aa6.46□□□□□ -1.38
TMEM116-209ENST00000550020 J3QR89 54 aa6.46□□□□□ -1.38
TMEM116-209ENST00000550020 UBE2D1P51668 147 aa6.46□□□□□ -1.38
TMEM116-209ENST00000550020 TIRAPP58753 221 aa6.46□□□□□ -1.38
TMEM116-209ENST00000550020 DEFB104AQ8WTQ1 72 aa6.46□□□□□ -1.38
TMEM116-209ENST00000550020 COPS9Q8WXC6 57 aa6.46□□□□□ -1.38
TMEM116-209ENST00000550020 MYO18BQ8IUG5 2567 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 TRBV20-1A0A075B6N2 111 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 TRGV2A0A075B6R0 118 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 IGHV1-58A0A0C4DH39 117 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 TRBV6-4A0A1B0GX49 114 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 HERVK_113P63121 156 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 HIST2H2BCQ6DN03 193 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 Q6ZSN1 163 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 OPRPNQ99935 248 aaPredicted RBP6.45□□□□□ -1.38
TMEM116-209ENST00000550020 NAA38Q9BRA0 125 aaKnown RBP6.45□□□□□ -1.38
TMEM116-209ENST00000550020 OVOL2Q9BRP0 275 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 GTSF1LQ9H1H1 148 aa6.45□□□□□ -1.38
TMEM116-209ENST00000550020 NAV2Q8IVL1 2488 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 UBE2L6O14933 153 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 TIMM17BO60830 172 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 IGHV3-30P01768 117 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 IGHV3-30-3P0DP02 117 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 IGHV3-30-5P0DP03 117 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 CIRBPQ14011 172 aaKnown RBP6.44□□□□□ -1.38
TMEM116-209ENST00000550020 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 PGPEP1Q9NXJ5 209 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 PRO1854Q9UHT4 67 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 FAM208BQ5VWN6 2430 aa6.44□□□□□ -1.38
TMEM116-209ENST00000550020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.43□□□□□ -1.38
TMEM116-209ENST00000550020 A0A0B4J2C4 111 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 IGKV2-29A2NJV5 120 aaPredicted RBP6.43□□□□□ -1.38
TMEM116-209ENST00000550020 SMIM9A6NGZ8 99 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 ADARB2-AS1A8MUL3 147 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 TSPEAR-AS2P59090 65 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 UBE2D3P61077 147 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 UBE2D2P62837 147 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE13Q4V321 117 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 Q6ZTI0 123 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 FAM19A3Q7Z5A8 133 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 VSIG2Q96IQ7 327 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 NOP10Q9NPE3 64 aaKnown RBP6.43□□□□□ -1.38
TMEM116-209ENST00000550020 CSPG4Q6UVK1 2322 aa6.43□□□□□ -1.38
TMEM116-209ENST00000550020 IGLV5-45A0A087WSX0 123 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 TRGV4A0A0C4DH28 118 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 PRM2P04554 102 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 IFITM1P13164 125 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
TMEM116-209ENST00000550020 RBX1P62877 108 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 RNF151Q2KHN1 245 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 C9orf66Q5T8R8 295 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 Q6ZUT4 128 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 RNF183Q96D59 192 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 TMEM243Q9BU79 118 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 C19orf73Q9NVV2 129 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 NDUFA12Q9UI09 145 aa6.42□□□□□ -1.38
TMEM116-209ENST00000550020 FLNCQ14315 2725 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 LOC107984156A0A0G2JMH3 177 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE7O76087 117 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 APOMO95445 188 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 LY6G6DO95868 133 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE12FP0CL80 117 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE12GP0CL81 117 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE12IP0CL82 117 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 ZFAND6Q6FIF0 208 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 CEMP1Q6PRD7 247 aaPredicted RBP6.41□□□□□ -1.38
TMEM116-209ENST00000550020 ARL17AQ8IVW1 177 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 LINC00482Q8N8I6 264 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 CSNK1G2-AS1Q8NCQ2 148 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 SPANXDQ9BXN6 97 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 SPANXCQ9NY87 97 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
TMEM116-209ENST00000550020 CREBBPQ92793 2442 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 COL12A1Q99715 3063 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE12JA6NER3 117 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 G3V4G9 280 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 NDUFA1O15239 70 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 TSPAN13O95857 204 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 GIG44P09565 113 aaPredicted RBP6.4□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE4Q13068 117 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 GAGE5Q13069 117 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 KIR2DL5BQ8NHK3 375 aa6.4□□□□□ -1.38
TMEM116-209ENST00000550020 FBN2P35556 2912 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 A4D1N5 150 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 H3BMG7 143 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 CFC1BP0CG36 223 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 CFC1P0CG37 223 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 PSMB2P49721 201 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 HERV-K104P63124 156 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 MIAQ16674 131 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 HIST2H2BDQ6DRA6 164 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms