RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 UBE2WQ96B02 151 aa7.9□□□□□ -1.14
DDX54-206ENST00000549271 FOXA3P55318 350 aaPredicted RBP7.89□□□□□ -1.15
DDX54-206ENST00000549271 IQCJQ1A5X6 159 aa7.89□□□□□ -1.15
DDX54-206ENST00000549271 C14orf177Q52M58 125 aa7.89□□□□□ -1.15
DDX54-206ENST00000549271 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.89□□□□□ -1.15
DDX54-206ENST00000549271 SMIM7Q9BQ49 75 aa7.89□□□□□ -1.15
DDX54-206ENST00000549271 CHCHD5Q9BSY4 110 aa7.89□□□□□ -1.15
DDX54-206ENST00000549271 NIT2Q9NQR4 276 aa7.89□□□□□ -1.15
DDX54-206ENST00000549271 A8MWL6 223 aa7.88□□□□□ -1.15
DDX54-206ENST00000549271 GAGE6Q13070 117 aa7.88□□□□□ -1.15
DDX54-206ENST00000549271 KCNIP4Q6PIL6 250 aa7.88□□□□□ -1.15
DDX54-206ENST00000549271 LINC01551Q86U37 167 aa7.88□□□□□ -1.15
DDX54-206ENST00000549271 C15orf54Q8N8G6 183 aa7.88□□□□□ -1.15
DDX54-206ENST00000549271 GATD1Q8NB37 220 aa7.88□□□□□ -1.15
DDX54-206ENST00000549271 TRBV25-1A0A075B6N4 114 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 C9JQL5 133 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 GAS8-AS1O95177 125 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 ANGP03950 147 aaKnown RBP7.87□□□□□ -1.15
DDX54-206ENST00000549271 RBX1P62877 108 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 CT83Q5H943 113 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 Q6ZRU5 148 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 PGLYRP4Q96LB8 373 aa7.87□□□□□ -1.15
DDX54-206ENST00000549271 TRAV26-2A0A0B4J265 109 aa7.86□□□□□ -1.15
DDX54-206ENST00000549271 IGHV1-24A0A0C4DH33 117 aa7.86□□□□□ -1.15
DDX54-206ENST00000549271 PKIAP61925 76 aa7.86□□□□□ -1.15
DDX54-206ENST00000549271 TEX261Q6UWH6 196 aa7.86□□□□□ -1.15
DDX54-206ENST00000549271 C1orf43Q9BWL3 253 aa7.86□□□□□ -1.15
DDX54-206ENST00000549271 OSTCQ9NRP0 149 aa7.86□□□□□ -1.15
DDX54-206ENST00000549271 PRR34Q9NV39 138 aa7.86□□□□□ -1.15
DDX54-206ENST00000549271 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
DDX54-206ENST00000549271 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
DDX54-206ENST00000549271 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
DDX54-206ENST00000549271 TSKUQ8WUA8 353 aa7.85□□□□□ -1.15
DDX54-206ENST00000549271 RPL39LQ96EH5 51 aaKnown RBP7.85□□□□□ -1.15
DDX54-206ENST00000549271 MIAQ16674 131 aa7.84□□□□□ -1.15
DDX54-206ENST00000549271 DGAT2L7PQ6IED9 249 aa7.84□□□□□ -1.15
DDX54-206ENST00000549271 LINC00269Q8N2A0 174 aa7.84□□□□□ -1.15
DDX54-206ENST00000549271 C20orf203Q8NBC4 194 aa7.84□□□□□ -1.15
DDX54-206ENST00000549271 TMEM243Q9BU79 118 aa7.84□□□□□ -1.15
DDX54-206ENST00000549271 GFRA4Q9GZZ7 299 aa7.84□□□□□ -1.15
DDX54-206ENST00000549271 V9GYV3 84 aa7.84□□□□□ -1.15
DDX54-206ENST00000549271 FAT4Q6V0I7 4981 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 A0A1B0GUV1 79 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 FAM231BA6NCW3 169 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 CRPP02741 224 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 RPL23P62829 140 aaKnown RBP7.83□□□□□ -1.16
DDX54-206ENST00000549271 TMEM241Q24JQ0 296 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 FAM74A3Q4VXF1 159 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 SMIM15Q7Z3B0 74 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 ISOC2Q96AB3 205 aa7.83□□□□□ -1.16
DDX54-206ENST00000549271 A0A1B0GUT8 65 aa7.82□□□□□ -1.16
DDX54-206ENST00000549271 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
DDX54-206ENST00000549271 COTL1Q14019 142 aa7.82□□□□□ -1.16
DDX54-206ENST00000549271 CLPSL2Q6UWE3 100 aa7.82□□□□□ -1.16
DDX54-206ENST00000549271 C9orf163Q8N9P6 203 aa7.82□□□□□ -1.16
DDX54-206ENST00000549271 RNF185Q96GF1 192 aa7.82□□□□□ -1.16
DDX54-206ENST00000549271 AMTP48728 403 aa7.81□□□□□ -1.16
DDX54-206ENST00000549271 REG3AQ06141 175 aa7.81□□□□□ -1.16
DDX54-206ENST00000549271 NUP35Q8NFH5 326 aa7.81□□□□□ -1.16
DDX54-206ENST00000549271 TMEM191AQ9H0A3 160 aa7.81□□□□□ -1.16
DDX54-206ENST00000549271 TRBV6-5A0A0K0K1A5 114 aa7.8□□□□□ -1.16
DDX54-206ENST00000549271 SDHAF1A6NFY7 115 aa7.8□□□□□ -1.16
DDX54-206ENST00000549271 PRSS1P07477 247 aa7.8□□□□□ -1.16
DDX54-206ENST00000549271 RAB4AP20338 218 aa7.8□□□□□ -1.16
DDX54-206ENST00000549271 PEA15Q15121 130 aa7.8□□□□□ -1.16
DDX54-206ENST00000549271 SMDT1Q9H4I9 107 aa7.8□□□□□ -1.16
DDX54-206ENST00000549271 NAT8Q9UHE5 227 aa7.8□□□□□ -1.16
DDX54-206ENST00000549271 ODF1Q14990 250 aa7.79□□□□□ -1.16
DDX54-206ENST00000549271 ADIRFQ15847 76 aa7.79□□□□□ -1.16
DDX54-206ENST00000549271 BORCS7Q96B45 105 aa7.79□□□□□ -1.16
DDX54-206ENST00000549271 LPAP08519 4548 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 IGLV10-54A0A075B6I4 117 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 UBE2L6O14933 153 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 NCR2O95944 276 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 HLA-DQA1P01909 254 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 RPS10P46783 165 aaKnown RBP7.78□□□□□ -1.16
DDX54-206ENST00000549271 POLR2KP53803 58 aaKnown RBP7.78□□□□□ -1.16
DDX54-206ENST00000549271 SDIM1Q6ZPB5 146 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 AMN1Q8IY45 258 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 CLRN3Q8NCR9 226 aa7.78□□□□□ -1.16
DDX54-206ENST00000549271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.77□□□□□ -1.17
DDX54-206ENST00000549271 TRAV8-4A0A0B4J246 113 aa7.77□□□□□ -1.17
DDX54-206ENST00000549271 SMIM27A0A1W2PRY6 76 aa7.77□□□□□ -1.17
DDX54-206ENST00000549271 IGKV2-29A2NJV5 120 aaPredicted RBP7.77□□□□□ -1.17
DDX54-206ENST00000549271 I3L3M4 83 aa7.77□□□□□ -1.17
DDX54-206ENST00000549271 PMCHP20382 165 aa7.77□□□□□ -1.17
DDX54-206ENST00000549271 RIGQ13278 110 aa7.77□□□□□ -1.17
DDX54-206ENST00000549271 CIRBPQ14011 172 aaKnown RBP7.77□□□□□ -1.17
DDX54-206ENST00000549271 MUC2Q02817 5179 aa7.77□□□□□ -1.17
DDX54-206ENST00000549271 H7C423 109 aa7.76□□□□□ -1.17
DDX54-206ENST00000549271 TSHBP01222 138 aa7.76□□□□□ -1.17
DDX54-206ENST00000549271 ESDP10768 282 aa7.76□□□□□ -1.17
DDX54-206ENST00000549271 CNBPP62633 177 aaKnown RBP7.76□□□□□ -1.17
DDX54-206ENST00000549271 MRAP2Q96G30 205 aa7.76□□□□□ -1.17
DDX54-206ENST00000549271 ST20Q9HBF5 79 aa7.76□□□□□ -1.17
DDX54-206ENST00000549271 NAT8BQ9UHF3 227 aa7.76□□□□□ -1.17
DDX54-206ENST00000549271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms