RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TINCRA0A1B0GVN0 87 aa16.97■□□□□ 0.31
NPAS3-206ENST00000548645 TMEM61Q8N0U2 210 aa16.97■□□□□ 0.31
NPAS3-206ENST00000548645 DEFB121Q5J5C9 76 aa16.97■□□□□ 0.31
NPAS3-206ENST00000548645 IGHV4-38-2P0DP08 117 aa16.96■□□□□ 0.31
NPAS3-206ENST00000548645 CEMP1Q6PRD7 247 aaPredicted RBP16.96■□□□□ 0.31
NPAS3-206ENST00000548645 NPC2P61916 151 aa16.96■□□□□ 0.3
NPAS3-206ENST00000548645 CFHR3Q02985 330 aa16.95■□□□□ 0.3
NPAS3-206ENST00000548645 K7EQG2 157 aa16.95■□□□□ 0.3
NPAS3-206ENST00000548645 Q6ZSV7 163 aa16.95■□□□□ 0.3
NPAS3-206ENST00000548645 RNASE13Q5GAN3 156 aaKnown RBP16.94■□□□□ 0.3
NPAS3-206ENST00000548645 TNFRSF18Q9Y5U5 241 aa16.94■□□□□ 0.3
NPAS3-206ENST00000548645 TIMM17BO60830 172 aa16.93■□□□□ 0.3
NPAS3-206ENST00000548645 DUX3Q96PT4 197 aa16.93■□□□□ 0.3
NPAS3-206ENST00000548645 IGHV3-73A0A0B4J1V6 119 aa16.92■□□□□ 0.3
NPAS3-206ENST00000548645 SPTAN1Q13813 2472 aaKnown RBP16.92■□□□□ 0.3
NPAS3-206ENST00000548645 A8MZ25 164 aa16.92■□□□□ 0.3
NPAS3-206ENST00000548645 AKAP6Q13023 2319 aa16.92■□□□□ 0.3
NPAS3-206ENST00000548645 RNF152Q8N8N0 203 aa16.9■□□□□ 0.3
NPAS3-206ENST00000548645 ZFYVE26Q68DK2 2539 aa16.9■□□□□ 0.3
NPAS3-206ENST00000548645 COL12A1Q99715 3063 aa16.9■□□□□ 0.3
NPAS3-206ENST00000548645 ABCA2Q9BZC7 2435 aa16.9■□□□□ 0.3
NPAS3-206ENST00000548645 PROK1P58294 105 aa16.89■□□□□ 0.29
NPAS3-206ENST00000548645 UBE2D4Q9Y2X8 147 aa16.89■□□□□ 0.29
NPAS3-206ENST00000548645 TRBV7-7A0A0K0K1E9 115 aa16.88■□□□□ 0.29
NPAS3-206ENST00000548645 PSMB8P28062 276 aa16.87■□□□□ 0.29
NPAS3-206ENST00000548645 CHCHD7Q9BUK0 85 aa16.87■□□□□ 0.29
NPAS3-206ENST00000548645 IGHV4-61A0A0C4DH41 118 aa16.87■□□□□ 0.29
NPAS3-206ENST00000548645 MEIG1Q5JSS6 88 aa16.87■□□□□ 0.29
NPAS3-206ENST00000548645 ZFHX3Q15911 3703 aa16.86■□□□□ 0.29
NPAS3-206ENST00000548645 HTN1P15515 57 aa16.86■□□□□ 0.29
NPAS3-206ENST00000548645 LY6DQ14210 128 aa16.86■□□□□ 0.29
NPAS3-206ENST00000548645 PIMREGQ9BSJ6 248 aa16.86■□□□□ 0.29
NPAS3-206ENST00000548645 UCNP55089 124 aa16.86■□□□□ 0.29
NPAS3-206ENST00000548645 CIRBPQ14011 172 aaKnown RBP16.86■□□□□ 0.29
NPAS3-206ENST00000548645 TMEM95Q3KNT9 176 aa16.86■□□□□ 0.29
NPAS3-206ENST00000548645 FAM110AQ9BQ89 295 aa16.86■□□□□ 0.29
NPAS3-206ENST00000548645 NDUFA1O15239 70 aa16.85■□□□□ 0.29
NPAS3-206ENST00000548645 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.84■□□□□ 0.29
NPAS3-206ENST00000548645 IGKV2-29A2NJV5 120 aaPredicted RBP16.84■□□□□ 0.29
NPAS3-206ENST00000548645 ACYP1P07311 99 aa16.84■□□□□ 0.29
NPAS3-206ENST00000548645 DAND5Q8N907 189 aa16.84■□□□□ 0.29
NPAS3-206ENST00000548645 TMEM101Q96IK0 257 aa16.84■□□□□ 0.29
NPAS3-206ENST00000548645 SMIM20Q8N5G0 67 aa16.83■□□□□ 0.29
NPAS3-206ENST00000548645 DOPEY2Q9Y3R5 2298 aa16.83■□□□□ 0.29
NPAS3-206ENST00000548645 RBMY1A1P0DJD3 496 aaKnown RBP16.83■□□□□ 0.28
NPAS3-206ENST00000548645 RBMY1CP0DJD4 496 aa16.83■□□□□ 0.28
NPAS3-206ENST00000548645 RBMY1FQ15415 496 aaKnown RBP16.83■□□□□ 0.28
NPAS3-206ENST00000548645 CITED2Q99967 270 aaPredicted RBP16.83■□□□□ 0.28
NPAS3-206ENST00000548645 CDKN2A-AS1Q9UH64 79 aa16.83■□□□□ 0.28
NPAS3-206ENST00000548645 KNCNA6PVL3 124 aa16.82■□□□□ 0.28
NPAS3-206ENST00000548645 CHCHD5Q9BSY4 110 aa16.82■□□□□ 0.28
NPAS3-206ENST00000548645 CFAP46Q8IYW2 2715 aa16.82■□□□□ 0.28
NPAS3-206ENST00000548645 TIRAPP58753 221 aa16.81■□□□□ 0.28
NPAS3-206ENST00000548645 LINC00467Q9BRT7 94 aa16.81■□□□□ 0.28
NPAS3-206ENST00000548645 SYNJ2BPP57105 145 aa16.8■□□□□ 0.28
NPAS3-206ENST00000548645 IMUPQ9GZP8 106 aa16.8■□□□□ 0.28
NPAS3-206ENST00000548645 Q9UF83 564 aa16.8■□□□□ 0.28
NPAS3-206ENST00000548645 PIK3CD-AS1Q5SR53 167 aa16.8■□□□□ 0.28
NPAS3-206ENST00000548645 HIVEP3Q5T1R4 2406 aa16.8■□□□□ 0.28
NPAS3-206ENST00000548645 IGLV5-45A0A087WSX0 123 aa16.8■□□□□ 0.28
NPAS3-206ENST00000548645 Q6ZSN1 163 aa16.79■□□□□ 0.28
NPAS3-206ENST00000548645 LINC00308Q8TCZ7 52 aa16.79■□□□□ 0.28
NPAS3-206ENST00000548645 COX7A2LO14548 114 aa16.79■□□□□ 0.28
NPAS3-206ENST00000548645 TMEM89A2RUT3 159 aa16.78■□□□□ 0.28
NPAS3-206ENST00000548645 C10orf99Q6UWK7 81 aa16.78■□□□□ 0.28
NPAS3-206ENST00000548645 DNAJC30Q96LL9 226 aa16.77■□□□□ 0.28
NPAS3-206ENST00000548645 SORL1Q92673 2214 aa16.77■□□□□ 0.28
NPAS3-206ENST00000548645 C10orf105Q8TEF2 133 aa16.77■□□□□ 0.27
NPAS3-206ENST00000548645 COPS9Q8WXC6 57 aa16.77■□□□□ 0.27
NPAS3-206ENST00000548645 DUX5Q96PT3 197 aa16.77■□□□□ 0.27
NPAS3-206ENST00000548645 HERV-K104P63124 156 aa16.76■□□□□ 0.27
NPAS3-206ENST00000548645 ZNF415Q09FC8 603 aa16.76■□□□□ 0.27
NPAS3-206ENST00000548645 IGSF10Q6WRI0 2623 aa16.76■□□□□ 0.27
NPAS3-206ENST00000548645 DGAT2L7PQ6IED9 249 aa16.76■□□□□ 0.27
NPAS3-206ENST00000548645 Q9H8V8 135 aa16.76■□□□□ 0.27
NPAS3-206ENST00000548645 EPG5Q9HCE0 2579 aa16.75■□□□□ 0.27
NPAS3-206ENST00000548645 TMEM126AQ9H061 195 aa16.75■□□□□ 0.27
NPAS3-206ENST00000548645 IGHV3-38A0A0C4DH36 116 aa16.75■□□□□ 0.27
NPAS3-206ENST00000548645 MSMBP08118 114 aa16.74■□□□□ 0.27
NPAS3-206ENST00000548645 FAM236AA0A1B0GUQ0 79 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 FAM236BA0A1B0GV22 79 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 C19orf84I3L1E1 186 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 IGHV3-53P01767 116 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.73■□□□□ 0.27
NPAS3-206ENST00000548645 CELSR1Q9NYQ6 3014 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 IGLV5-39A0A0G2JS06 123 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 HERVK_113P63121 156 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 SHISA2Q6UWI4 295 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 PRORYQ9H606 182 aa16.73■□□□□ 0.27
NPAS3-206ENST00000548645 NACAE9PAV3 2078 aa16.72■□□□□ 0.27
NPAS3-206ENST00000548645 PRM2P04554 102 aa16.72■□□□□ 0.27
NPAS3-206ENST00000548645 LINC00643Q86TS7 51 aa16.72■□□□□ 0.27
NPAS3-206ENST00000548645 DEFB131AP59861 70 aa16.71■□□□□ 0.27
NPAS3-206ENST00000548645 COX6A2Q02221 97 aa16.71■□□□□ 0.27
NPAS3-206ENST00000548645 LINC01587Q99440 93 aa16.71■□□□□ 0.27
NPAS3-206ENST00000548645 TRACP01848 142 aa16.7■□□□□ 0.26
NPAS3-206ENST00000548645 HOXD3P31249 432 aaPredicted RBP16.7■□□□□ 0.26
NPAS3-206ENST00000548645 ZNF625Q96I27 306 aaPredicted RBP16.7■□□□□ 0.26
NPAS3-206ENST00000548645 USP24Q9UPU5 2620 aa16.7■□□□□ 0.26
NPAS3-206ENST00000548645 A0A0U1RRA0 63 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms