RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 F2Z2F3 143 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 PRSS1P07477 247 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 NTF3P20783 257 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 NKX2-5P52952 324 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-211ENST00000547950 MIAQ16674 131 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 C9orf62Q8N4C0 152 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 NUDT10Q8NFP7 164 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 CIRBP-AS1Q8TBR5 109 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 NUDT11Q96G61 164 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 KRTAP3-1Q9BYR8 98 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 BIN3Q9NQY0 253 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 VAX2Q9UIW0 290 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 IGLV10-54A0A075B6I4 117 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 TRGC1P0CF51 173 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 BCL2P10415 239 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 REG3AQ06141 175 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 TWIST1Q15672 202 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 IQCJQ1A5X6 159 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 RASL11AQ6T310 242 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 SLC51BQ86UW2 128 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 TCTE3Q8IZS6 198 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 SMIM12Q96EX1 92 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 NIT2Q9NQR4 276 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 PRR34Q9NV39 138 aa4.35□□□□□ -1.71
SCAF11-211ENST00000547950 DMBT1Q9UGM3 2413 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-211ENST00000547950 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
SCAF11-211ENST00000547950 KRTAP26-1Q6PEX3 210 aa4.34□□□□□ -1.71
SCAF11-211ENST00000547950 C20orf203Q8NBC4 194 aa4.34□□□□□ -1.71
SCAF11-211ENST00000547950 OCC1Q8TAD7 63 aa4.34□□□□□ -1.71
SCAF11-211ENST00000547950 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
SCAF11-211ENST00000547950 TMEM243Q9BU79 118 aa4.34□□□□□ -1.71
SCAF11-211ENST00000547950 RNASE7Q9H1E1 156 aaKnown RBP4.34□□□□□ -1.71
SCAF11-211ENST00000547950 DPH3P1Q9H4G8 78 aa4.34□□□□□ -1.71
SCAF11-211ENST00000547950 HERC1Q15751 4861 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-211ENST00000547950 hCG_2014768A0A024R1R8 64 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 IGLV4-60A0A075B6I1 120 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 IGKV3OR2-268A0A0C4DH90 116 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 hDV102S1A0JD36 115 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 K7EN84 100 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 UBE2L6O14933 153 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 TAGLN2P37802 199 aaKnown RBP4.33□□□□□ -1.72
SCAF11-211ENST00000547950 AMTP48728 403 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 CEBPGP53567 150 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 FOXA3P55318 350 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-211ENST00000547950 COTL1Q14019 142 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 WDR73Q6P4I2 378 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 C9orf163Q8N9P6 203 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 GATD1Q8NB37 220 aa4.33□□□□□ -1.72
SCAF11-211ENST00000547950 RPP21Q9H633 154 aaKnown RBP4.33□□□□□ -1.72
SCAF11-211ENST00000547950 TRAV8-4A0A0B4J246 113 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 KRTAP29-1A8MX34 341 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-211ENST00000547950 GATCO43716 136 aaKnown RBP4.32□□□□□ -1.72
SCAF11-211ENST00000547950 CTRLP40313 264 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 ALKAL2Q6UX46 152 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 Q6ZNX1 250 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 SMIM15Q7Z3B0 74 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 CLRN3Q8NCR9 226 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 GTSF1Q8WW33 167 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 ANAPC16Q96DE5 110 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
SCAF11-211ENST00000547950 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 GAGE12HA6NDE8 117 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 C9orf118A6NHY6 69 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 PANO1I0J062 215 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 KRTAP10-4P60372 401 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-211ENST00000547950 RPL37AP61513 92 aaKnown RBP4.31□□□□□ -1.72
SCAF11-211ENST00000547950 BLOC1S1P78537 153 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 AMMECR1LQ6DCA0 310 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 AKAP14Q86UN6 197 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
SCAF11-211ENST00000547950 PGLYRP4Q96LB8 373 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 TMA7Q9Y2S6 64 aaKnown RBP4.31□□□□□ -1.72
SCAF11-211ENST00000547950 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
SCAF11-211ENST00000547950 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-211ENST00000547950 IGKV2-29A2NJV5 120 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-211ENST00000547950 A8MWL6 223 aa4.3□□□□□ -1.72
SCAF11-211ENST00000547950 TMEM250H0YL14 139 aa4.3□□□□□ -1.72
SCAF11-211ENST00000547950 SLPIP03973 132 aa4.3□□□□□ -1.72
SCAF11-211ENST00000547950 PMCHP20382 165 aa4.3□□□□□ -1.72
SCAF11-211ENST00000547950 RNASEKQ6P5S7 137 aaKnown RBP4.3□□□□□ -1.72
SCAF11-211ENST00000547950 CNFNQ9BYD5 112 aa4.3□□□□□ -1.72
SCAF11-211ENST00000547950 EIF5A2Q9GZV4 153 aaKnown RBP4.3□□□□□ -1.72
SCAF11-211ENST00000547950 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
SCAF11-211ENST00000547950 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-211ENST00000547950 CNBPP62633 177 aaKnown RBP4.29□□□□□ -1.72
SCAF11-211ENST00000547950 CFAP161Q6P656 301 aa4.29□□□□□ -1.72
SCAF11-211ENST00000547950 TEX261Q6UWH6 196 aa4.29□□□□□ -1.72
SCAF11-211ENST00000547950 BORCS7Q96B45 105 aa4.29□□□□□ -1.72
SCAF11-211ENST00000547950 SDHAF1A6NFY7 115 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 ZNF727A8MUV8 499 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 I3L3M4 83 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 GAS8-AS1O95177 125 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 NCR2O95944 276 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 OXTP01178 125 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 APCSP02743 223 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms