RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 J3QQQ9 107 aa11.27□□□□□ -0.6
BRF1-212ENST00000547562 RRN3P1Q2M238 152 aa11.27□□□□□ -0.6
BRF1-212ENST00000547562 MRPL16Q9NX20 251 aaKnown RBP11.27□□□□□ -0.6
BRF1-212ENST00000547562 CUBNO60494 3623 aa11.27□□□□□ -0.61
BRF1-212ENST00000547562 ACANP16112 2415 aa11.27□□□□□ -0.61
BRF1-212ENST00000547562 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
BRF1-212ENST00000547562 KRTAP1-1Q07627 177 aa11.27□□□□□ -0.61
BRF1-212ENST00000547562 STHQ8IWL8 128 aa11.27□□□□□ -0.61
BRF1-212ENST00000547562 AMELXQ99217 191 aa11.27□□□□□ -0.61
BRF1-212ENST00000547562 XCL2Q9UBD3 114 aa11.27□□□□□ -0.61
BRF1-212ENST00000547562 SETD2Q9BYW2 2564 aaPredicted RBP11.26□□□□□ -0.61
BRF1-212ENST00000547562 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
BRF1-212ENST00000547562 SAP30O75446 220 aa11.26□□□□□ -0.61
BRF1-212ENST00000547562 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
BRF1-212ENST00000547562 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
BRF1-212ENST00000547562 FAM104AQ969W3 186 aa11.26□□□□□ -0.61
BRF1-212ENST00000547562 CITED2Q99967 270 aaPredicted RBP11.26□□□□□ -0.61
BRF1-212ENST00000547562 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
BRF1-212ENST00000547562 SPANXB1Q9NS25 103 aaPredicted RBP11.25□□□□□ -0.61
BRF1-212ENST00000547562 LEPROTO15243 131 aa11.25□□□□□ -0.61
BRF1-212ENST00000547562 RS1O15537 224 aa11.25□□□□□ -0.61
BRF1-212ENST00000547562 UBE2D1P51668 147 aa11.25□□□□□ -0.61
BRF1-212ENST00000547562 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
BRF1-212ENST00000547562 AZU1P20160 251 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 CRYBA4P53673 196 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
BRF1-212ENST00000547562 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 LINC01006Q8NI28 216 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 DNAJC30Q96LL9 226 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 CHCHD7Q9BUK0 85 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 YAE1D1Q9NRH1 226 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 ITPR2Q14571 2701 aa11.24□□□□□ -0.61
BRF1-212ENST00000547562 CEMP1Q6PRD7 247 aaPredicted RBP11.23□□□□□ -0.61
BRF1-212ENST00000547562 MTORP42345 2549 aa11.23□□□□□ -0.61
BRF1-212ENST00000547562 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
BRF1-212ENST00000547562 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
BRF1-212ENST00000547562 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
BRF1-212ENST00000547562 IGHV3-30P01768 117 aa11.22□□□□□ -0.61
BRF1-212ENST00000547562 IGHV3-30-5P0DP03 117 aa11.22□□□□□ -0.61
BRF1-212ENST00000547562 IGHV3OR16-12A0A075B7B8 117 aa11.21□□□□□ -0.61
BRF1-212ENST00000547562 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
BRF1-212ENST00000547562 IL17DQ8TAD2 202 aa11.21□□□□□ -0.61
BRF1-212ENST00000547562 SPANXA1Q9NS26 97 aa11.21□□□□□ -0.61
BRF1-212ENST00000547562 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
BRF1-212ENST00000547562 UBE2D4Q9Y2X8 147 aa11.21□□□□□ -0.61
BRF1-212ENST00000547562 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
BRF1-212ENST00000547562 H3BMG7 143 aa11.2□□□□□ -0.62
BRF1-212ENST00000547562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
BRF1-212ENST00000547562 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
BRF1-212ENST00000547562 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
BRF1-212ENST00000547562 F8W1H4 67 aa11.19□□□□□ -0.62
BRF1-212ENST00000547562 RNASE13Q5GAN3 156 aaKnown RBP11.19□□□□□ -0.62
BRF1-212ENST00000547562 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
BRF1-212ENST00000547562 G3V4G9 280 aa11.19□□□□□ -0.62
BRF1-212ENST00000547562 APOMO95445 188 aa11.19□□□□□ -0.62
BRF1-212ENST00000547562 JMJD1CQ15652 2540 aa11.19□□□□□ -0.62
BRF1-212ENST00000547562 TRGV1A0A0A0MS02 117 aa11.18□□□□□ -0.62
BRF1-212ENST00000547562 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
BRF1-212ENST00000547562 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
BRF1-212ENST00000547562 HELZ2Q9BYK8 2649 aaKnown RBP11.18□□□□□ -0.62
BRF1-212ENST00000547562 NOTCH3Q9UM47 2321 aa11.18□□□□□ -0.62
BRF1-212ENST00000547562 TSPAN13O95857 204 aa11.18□□□□□ -0.62
BRF1-212ENST00000547562 ANK3Q12955 4377 aaKnown RBP11.17□□□□□ -0.62
BRF1-212ENST00000547562 IGHV3-30-3P0DP02 117 aa11.17□□□□□ -0.62
BRF1-212ENST00000547562 TIMM21Q9BVV7 248 aa11.17□□□□□ -0.62
BRF1-212ENST00000547562 TINCRA0A1B0GVN0 87 aa11.17□□□□□ -0.62
BRF1-212ENST00000547562 CFC1BP0CG36 223 aa11.17□□□□□ -0.62
BRF1-212ENST00000547562 CFC1P0CG37 223 aa11.17□□□□□ -0.62
BRF1-212ENST00000547562 CMC4P56277 68 aaPredicted RBP11.17□□□□□ -0.62
BRF1-212ENST00000547562 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
BRF1-212ENST00000547562 J3QKU1 62 aa11.16□□□□□ -0.62
BRF1-212ENST00000547562 Q6ZUT4 128 aa11.16□□□□□ -0.62
BRF1-212ENST00000547562 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
BRF1-212ENST00000547562 RPL24P83731 157 aaKnown RBP11.16□□□□□ -0.62
BRF1-212ENST00000547562 WFDC2Q14508 124 aa11.16□□□□□ -0.62
BRF1-212ENST00000547562 UNC79Q9P2D8 2635 aa11.15□□□□□ -0.62
BRF1-212ENST00000547562 Q6ZTI0 123 aa11.15□□□□□ -0.62
BRF1-212ENST00000547562 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.63
BRF1-212ENST00000547562 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.63
BRF1-212ENST00000547562 IGLV1-51P01701 117 aa11.15□□□□□ -0.63
BRF1-212ENST00000547562 GIG44P09565 113 aaPredicted RBP11.15□□□□□ -0.63
BRF1-212ENST00000547562 GAGE13Q4V321 117 aa11.15□□□□□ -0.63
BRF1-212ENST00000547562 IGHV1-58A0A0C4DH39 117 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
BRF1-212ENST00000547562 PRO0461Q9UI25 63 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
BRF1-212ENST00000547562 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 CIDEAO60543 219 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 HILS1P60008 231 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 UBE2D3P61077 147 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 UBE2D2P62837 147 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 FAM110AQ9BQ89 295 aa11.14□□□□□ -0.63
BRF1-212ENST00000547562 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 WFDC10AQ9H1F0 79 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 TRAV4A0A0B4J268 109 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 A4D1N5 150 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 ADARB2-AS1A8MUL3 147 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 K7EQD1 137 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms