RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
RBFOX1-208ENST00000547372 CRYGAP11844 174 aa8.93□□□□□ -0.98
RBFOX1-208ENST00000547372 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
RBFOX1-208ENST00000547372 TRBV7-1A0A0A6YYK4 115 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 A0A0U1RQV1 116 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 TIRAPP58753 221 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 C9orf139Q6ZV77 190 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 KHDC1LQ5JSQ8 128 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 KAAG1Q9UBP8 84 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 USP9XQ93008 2570 aaPredicted RBP8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 C2orf48Q96LS8 159 aa8.92□□□□□ -0.98
RBFOX1-208ENST00000547372 DNAL4O96015 105 aa8.91□□□□□ -0.98
RBFOX1-208ENST00000547372 WFDC11Q8NEX6 87 aa8.91□□□□□ -0.98
RBFOX1-208ENST00000547372 IGHV1-69DA0A0B4J2H0 117 aa8.91□□□□□ -0.98
RBFOX1-208ENST00000547372 J3QLI3 93 aa8.91□□□□□ -0.98
RBFOX1-208ENST00000547372 KLK9Q9UKQ9 250 aa8.91□□□□□ -0.98
RBFOX1-208ENST00000547372 IGHV3OR16-12A0A075B7B8 117 aa8.91□□□□□ -0.98
RBFOX1-208ENST00000547372 LRBAP50851 2863 aa8.9□□□□□ -0.98
RBFOX1-208ENST00000547372 NCOR2Q9Y618 2525 aa8.9□□□□□ -0.98
RBFOX1-208ENST00000547372 IGHV7-81A0A0B4J1V7 117 aa8.9□□□□□ -0.99
RBFOX1-208ENST00000547372 TOMM7Q9P0U1 55 aa8.9□□□□□ -0.99
RBFOX1-208ENST00000547372 TMEM258P61165 79 aa8.89□□□□□ -0.99
RBFOX1-208ENST00000547372 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
RBFOX1-208ENST00000547372 CCL21O00585 134 aa8.89□□□□□ -0.99
RBFOX1-208ENST00000547372 ATP5G1P05496 136 aa8.89□□□□□ -0.99
RBFOX1-208ENST00000547372 TMEM61Q8N0U2 210 aa8.89□□□□□ -0.99
RBFOX1-208ENST00000547372 RHPN1-AS1Q9BWJ2 59 aa8.89□□□□□ -0.99
RBFOX1-208ENST00000547372 RPL18AQ02543 176 aaKnown RBP8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 PRO3102Q9H379 93 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 PFN2P35080 140 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 BRD3OSQ6XYD6 125 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 LINC01600Q96MT4 127 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 C14orf132Q9NPU4 83 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 FAM223AQ8IWN6 122 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 WFDC9Q8NEX5 89 aa8.88□□□□□ -0.99
RBFOX1-208ENST00000547372 IGHV3-38A0A0C4DH36 116 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 SPINK13Q1W4C9 94 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 Q5XG85 94 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 SERP2Q8N6R1 65 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 SAA4P35542 130 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 LY6G5BQ8NDX9 201 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 DCANP1Q8TF63 244 aa8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 POLR2KP53803 58 aaKnown RBP8.87□□□□□ -0.99
RBFOX1-208ENST00000547372 MIAQ16674 131 aa8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 FAM110DQ8TAY7 271 aaPredicted RBP8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 C20orf173Q96LM9 149 aa8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 CUBNO60494 3623 aa8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 EDN2P20800 178 aa8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 DEFB121Q5J5C9 76 aa8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 C20orf197Q8N268 126 aa8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 MRAPQ8TCY5 172 aa8.86□□□□□ -0.99
RBFOX1-208ENST00000547372 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 UCNP55089 124 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 Q8N2B8 174 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 TRAV23DV6A0A075B6W5 121 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 CUL9Q8IWT3 2517 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 FN1P02751 2386 aaKnown RBP8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 MUC4Q99102 2169 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 CCDC168Q8NDH2 2452 aa8.85□□□□□ -0.99
RBFOX1-208ENST00000547372 LY6LH3BQJ8 138 aa8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 UNQ9165/PRO28630Q6UXU0 137 aa8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 ZFAND2AQ8N6M9 145 aa8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 LITAFQ99732 161 aa8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 IGHV3-16A0A0C4DH30 117 aa8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 NPBQ8NG41 125 aa8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 ZFAND3Q9H8U3 227 aa8.84□□□□□ -0.99
RBFOX1-208ENST00000547372 CXCL5P42830 114 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 FHL2Q14192 279 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 PRIMA1Q86XR5 153 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 TRBV12-3P01733 135 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 HILS1P60008 231 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 Q8N9W7 124 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 FAM236DA0A1B0GTK5 79 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 INAFM2P0DMQ5 153 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 FAM236CP0DP71 79 aa8.83□□□□□ -1
RBFOX1-208ENST00000547372 MRPL53Q96EL3 112 aaKnown RBP8.83□□□□□ -1
RBFOX1-208ENST00000547372 COX7A2LO14548 114 aa8.82□□□□□ -1
RBFOX1-208ENST00000547372 ZNF415Q09FC8 603 aa8.82□□□□□ -1
RBFOX1-208ENST00000547372 BRK1Q8WUW1 75 aa8.82□□□□□ -1
RBFOX1-208ENST00000547372 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.82□□□□□ -1
RBFOX1-208ENST00000547372 IGKV2-29A2NJV5 120 aaPredicted RBP8.82□□□□□ -1
RBFOX1-208ENST00000547372 C19orf54Q5BKX5 351 aa8.82□□□□□ -1
RBFOX1-208ENST00000547372 CCDC140Q96MF4 163 aa8.82□□□□□ -1
RBFOX1-208ENST00000547372 SPANXDQ9BXN6 97 aa8.82□□□□□ -1
RBFOX1-208ENST00000547372 IGHV1-58A0A0C4DH39 117 aa8.81□□□□□ -1
RBFOX1-208ENST00000547372 FAM223BA6NKX1 122 aa8.81□□□□□ -1
RBFOX1-208ENST00000547372 MINOS1Q5TGZ0 78 aa8.81□□□□□ -1
RBFOX1-208ENST00000547372 C20orf203Q8NBC4 194 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms