RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PKIAP61925 76 aa6.72□□□□□ -1.33
BEST3-208ENST00000547208 RBX1P62877 108 aa6.72□□□□□ -1.33
BEST3-208ENST00000547208 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
BEST3-208ENST00000547208 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.72□□□□□ -1.33
BEST3-208ENST00000547208 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
BEST3-208ENST00000547208 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
BEST3-208ENST00000547208 DPH3P1Q9H4G8 78 aa6.72□□□□□ -1.33
BEST3-208ENST00000547208 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
BEST3-208ENST00000547208 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
BEST3-208ENST00000547208 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.34
BEST3-208ENST00000547208 CRPP02741 224 aa6.71□□□□□ -1.34
BEST3-208ENST00000547208 TRGC1P0CF51 173 aa6.71□□□□□ -1.34
BEST3-208ENST00000547208 GAGE6Q13070 117 aa6.71□□□□□ -1.34
BEST3-208ENST00000547208 MIAQ16674 131 aa6.71□□□□□ -1.34
BEST3-208ENST00000547208 RASL11AQ6T310 242 aa6.71□□□□□ -1.34
BEST3-208ENST00000547208 LINC00469Q8N7U9 141 aa6.71□□□□□ -1.34
BEST3-208ENST00000547208 TMEM250H0YL14 139 aa6.7□□□□□ -1.34
BEST3-208ENST00000547208 CLPSL2Q6UWE3 100 aa6.7□□□□□ -1.34
BEST3-208ENST00000547208 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
BEST3-208ENST00000547208 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
BEST3-208ENST00000547208 C20orf203Q8NBC4 194 aa6.7□□□□□ -1.34
BEST3-208ENST00000547208 PGLYRP4Q96LB8 373 aa6.7□□□□□ -1.34
BEST3-208ENST00000547208 NIT2Q9NQR4 276 aa6.7□□□□□ -1.34
BEST3-208ENST00000547208 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 HLA-DQA1P01909 254 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 BLOC1S1P78537 153 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 TWIST1Q15672 202 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 FAM231DQ6ZW35 169 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 LINC00518Q8N0U6 118 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 GATD1Q8NB37 220 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 GFRA4Q9GZZ7 299 aa6.69□□□□□ -1.34
BEST3-208ENST00000547208 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 TRAV26-2A0A0B4J265 109 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 A0A1B0GUV1 79 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 PRSS1P07477 247 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 FOXA3P55318 350 aaPredicted RBP6.68□□□□□ -1.34
BEST3-208ENST00000547208 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
BEST3-208ENST00000547208 REG3AQ06141 175 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 C14orf177Q52M58 125 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 CLLU1Q5K131 121 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 CHAC1Q9BUX1 264 aa6.68□□□□□ -1.34
BEST3-208ENST00000547208 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
BEST3-208ENST00000547208 S100A6P06703 90 aa6.67□□□□□ -1.34
BEST3-208ENST00000547208 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
BEST3-208ENST00000547208 IGLV10-54A0A075B6I4 117 aa6.66□□□□□ -1.34
BEST3-208ENST00000547208 GATCO43716 136 aaKnown RBP6.66□□□□□ -1.34
BEST3-208ENST00000547208 NDUFS6O75380 124 aaKnown RBP6.66□□□□□ -1.34
BEST3-208ENST00000547208 RAB14P61106 215 aa6.66□□□□□ -1.34
BEST3-208ENST00000547208 CT83Q5H943 113 aa6.66□□□□□ -1.34
BEST3-208ENST00000547208 LINC01551Q86U37 167 aa6.66□□□□□ -1.34
BEST3-208ENST00000547208 COMMD7Q86VX2 200 aa6.66□□□□□ -1.34
BEST3-208ENST00000547208 RPL39LQ96EH5 51 aaKnown RBP6.66□□□□□ -1.34
BEST3-208ENST00000547208 A8MWL6 223 aa6.65□□□□□ -1.34
BEST3-208ENST00000547208 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.34
BEST3-208ENST00000547208 AMTP48728 403 aa6.65□□□□□ -1.34
BEST3-208ENST00000547208 COTL1Q14019 142 aa6.65□□□□□ -1.34
BEST3-208ENST00000547208 DGAT2L7PQ6IED9 249 aa6.65□□□□□ -1.34
BEST3-208ENST00000547208 TEX261Q6UWH6 196 aa6.65□□□□□ -1.34
BEST3-208ENST00000547208 TRAV8-4A0A0B4J246 113 aa6.64□□□□□ -1.35
BEST3-208ENST00000547208 GAS8-AS1O95177 125 aa6.64□□□□□ -1.35
BEST3-208ENST00000547208 SRP19P09132 144 aaKnown RBP6.64□□□□□ -1.35
BEST3-208ENST00000547208 CEBPGP53567 150 aa6.64□□□□□ -1.35
BEST3-208ENST00000547208 C9orf163Q8N9P6 203 aa6.64□□□□□ -1.35
BEST3-208ENST00000547208 SMIM7Q9BQ49 75 aa6.64□□□□□ -1.35
BEST3-208ENST00000547208 EIF5A2Q9GZV4 153 aaKnown RBP6.64□□□□□ -1.35
BEST3-208ENST00000547208 PANO1I0J062 215 aa6.63□□□□□ -1.35
BEST3-208ENST00000547208 TSKUQ8WUA8 353 aa6.63□□□□□ -1.35
BEST3-208ENST00000547208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
BEST3-208ENST00000547208 TRBV6-5A0A0K0K1A5 114 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 FAM231BA6NCW3 169 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 SDHAF1A6NFY7 115 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 ZNF727A8MUV8 499 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 HIGD1CA8MV81 97 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 UBE2L6O14933 153 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 SCO1O75880 301 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 NCR2O95944 276 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 SLPIP03973 132 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 CNBPP62633 177 aaKnown RBP6.62□□□□□ -1.35
BEST3-208ENST00000547208 SDIM1Q6ZPB5 146 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 CLRN3Q8NCR9 226 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 RNF185Q96GF1 192 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 OSTCQ9NRP0 149 aa6.62□□□□□ -1.35
BEST3-208ENST00000547208 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.61□□□□□ -1.35
BEST3-208ENST00000547208 A0A1B0GUT8 65 aa6.61□□□□□ -1.35
BEST3-208ENST00000547208 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
BEST3-208ENST00000547208 C9JQL5 133 aa6.61□□□□□ -1.35
BEST3-208ENST00000547208 SMIM15Q7Z3B0 74 aa6.61□□□□□ -1.35
BEST3-208ENST00000547208 C15orf56Q8N910 161 aa6.61□□□□□ -1.35
BEST3-208ENST00000547208 TMEM191AQ9H0A3 160 aa6.61□□□□□ -1.35
BEST3-208ENST00000547208 V9GYV3 84 aa6.61□□□□□ -1.35
BEST3-208ENST00000547208 hDV102S1A0JD36 115 aa6.6□□□□□ -1.35
BEST3-208ENST00000547208 PCP4L1A6NKN8 68 aa6.6□□□□□ -1.35
BEST3-208ENST00000547208 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
BEST3-208ENST00000547208 H7C423 109 aa6.6□□□□□ -1.35
BEST3-208ENST00000547208 I3L3M4 83 aa6.6□□□□□ -1.35
BEST3-208ENST00000547208 TSHBP01222 138 aa6.6□□□□□ -1.35
BEST3-208ENST00000547208 APCSP02743 223 aa6.6□□□□□ -1.35
BEST3-208ENST00000547208 FGF6P10767 208 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms