RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 CRYBA4P53673 196 aa13.42□□□□□ -0.26
VDR-204ENST00000547065 EMP1P54849 157 aa13.42□□□□□ -0.26
VDR-204ENST00000547065 UBE2V1Q13404 147 aa13.42□□□□□ -0.26
VDR-204ENST00000547065 CSNK1G2-AS1Q8NCQ2 148 aa13.42□□□□□ -0.26
VDR-204ENST00000547065 TRAV4A0A0B4J268 109 aa13.41□□□□□ -0.26
VDR-204ENST00000547065 VAMP3Q15836 100 aa13.41□□□□□ -0.26
VDR-204ENST00000547065 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
VDR-204ENST00000547065 GCSHP23434 173 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 Q6ZTI0 123 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 TM2D2Q9BX73 214 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 INSL3P51460 131 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 COTL1Q14019 142 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 TMEM170BQ5T4T1 132 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 CEND1Q8N111 149 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 CHCHD7Q9BUK0 85 aa13.4□□□□□ -0.26
VDR-204ENST00000547065 NOP10Q9NPE3 64 aaKnown RBP13.4□□□□□ -0.26
VDR-204ENST00000547065 NACAE9PAV3 2078 aa13.4□□□□□ -0.27
VDR-204ENST00000547065 OTOGQ6ZRI0 2925 aa13.39□□□□□ -0.27
VDR-204ENST00000547065 NOTCH2Q04721 2471 aa13.39□□□□□ -0.27
VDR-204ENST00000547065 CRLF1O75462 422 aa13.39□□□□□ -0.27
VDR-204ENST00000547065 PTTG1IPP53801 180 aa13.39□□□□□ -0.27
VDR-204ENST00000547065 ZNF479Q96JC4 524 aa13.39□□□□□ -0.27
VDR-204ENST00000547065 SPANXA1Q9NS26 97 aa13.39□□□□□ -0.27
VDR-204ENST00000547065 SETXQ7Z333 2677 aaKnown RBP13.38□□□□□ -0.27
VDR-204ENST00000547065 TRBV10-1A0A0K0K1A3 114 aa13.38□□□□□ -0.27
VDR-204ENST00000547065 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
VDR-204ENST00000547065 AMELXQ99217 191 aa13.38□□□□□ -0.27
VDR-204ENST00000547065 C9orf118A6NHY6 69 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 ZNF815PA8K554 130 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 SMIM13P0DJ93 91 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 OVOL2Q9BRP0 275 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 TRBV7-3A0A075B6L6 115 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 PLAC8L1A1L4L8 177 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 CCL25O15444 150 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 CIDEAO60543 219 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 FXYD2P54710 66 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 PHLDA1Q8WV24 401 aaPredicted RBP13.37□□□□□ -0.27
VDR-204ENST00000547065 HIST1H4GQ99525 98 aa13.37□□□□□ -0.27
VDR-204ENST00000547065 C9orf66Q5T8R8 295 aa13.36□□□□□ -0.27
VDR-204ENST00000547065 FAM104AQ969W3 186 aa13.36□□□□□ -0.27
VDR-204ENST00000547065 IGHV3-38A0A0C4DH36 116 aa13.35□□□□□ -0.27
VDR-204ENST00000547065 K7EQD1 137 aa13.35□□□□□ -0.27
VDR-204ENST00000547065 RPL36AP83881 106 aaKnown RBP13.35□□□□□ -0.27
VDR-204ENST00000547065 RPL36ALQ969Q0 106 aaKnown RBP13.35□□□□□ -0.27
VDR-204ENST00000547065 UBE2D4Q9Y2X8 147 aa13.35□□□□□ -0.27
VDR-204ENST00000547065 AMMECR1LQ6DCA0 310 aa13.35□□□□□ -0.27
VDR-204ENST00000547065 A0A0J9YXV3 536 aa13.34□□□□□ -0.27
VDR-204ENST00000547065 TMEM223A0PJW6 202 aa13.34□□□□□ -0.27
VDR-204ENST00000547065 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.33□□□□□ -0.28
VDR-204ENST00000547065 IGKV2-29A2NJV5 120 aaPredicted RBP13.33□□□□□ -0.28
VDR-204ENST00000547065 CEMP1Q6PRD7 247 aaPredicted RBP13.33□□□□□ -0.28
VDR-204ENST00000547065 DAZ4Q86SG3 579 aaKnown RBP13.33□□□□□ -0.28
VDR-204ENST00000547065 DAZ3Q9NR90 486 aaKnown RBP13.33□□□□□ -0.28
VDR-204ENST00000547065 TRGV2A0A075B6R0 118 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 K7EP13 123 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 GAGE7O76087 117 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 ZNF22P17026 224 aaPredicted RBP13.32□□□□□ -0.28
VDR-204ENST00000547065 SCGB1D4Q6XE38 83 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 TIMM21Q9BVV7 248 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 NIPBLQ6KC79 2804 aaeCLIP13.32□□□□□ -0.28
VDR-204ENST00000547065 LEPROTO15243 131 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 MRPS36P82909 103 aaKnown RBP13.32□□□□□ -0.28
VDR-204ENST00000547065 SLC25A29Q8N8R3 303 aa13.32□□□□□ -0.28
VDR-204ENST00000547065 J3QQQ9 107 aa13.31□□□□□ -0.28
VDR-204ENST00000547065 RAB37Q96AX2 223 aa13.31□□□□□ -0.28
VDR-204ENST00000547065 CITED1Q99966 193 aa13.31□□□□□ -0.28
VDR-204ENST00000547065 LGALS3P17931 250 aaKnown RBP13.3□□□□□ -0.28
VDR-204ENST00000547065 UBE2D3P61077 147 aa13.3□□□□□ -0.28
VDR-204ENST00000547065 UBE2D2P62837 147 aa13.3□□□□□ -0.28
VDR-204ENST00000547065 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
VDR-204ENST00000547065 H3BUT2 72 aa13.3□□□□□ -0.28
VDR-204ENST00000547065 TSPEAR-AS2P59090 65 aa13.3□□□□□ -0.28
VDR-204ENST00000547065 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
VDR-204ENST00000547065 NHP2Q9NX24 153 aaKnown RBP13.3□□□□□ -0.28
VDR-204ENST00000547065 TINCRA0A1B0GVN0 87 aa13.28□□□□□ -0.28
VDR-204ENST00000547065 TRBV6-4A0A1B0GX49 114 aa13.28□□□□□ -0.28
VDR-204ENST00000547065 GAGE12JA6NER3 117 aa13.28□□□□□ -0.28
VDR-204ENST00000547065 GAGE4Q13068 117 aa13.28□□□□□ -0.28
VDR-204ENST00000547065 GAGE5Q13069 117 aa13.28□□□□□ -0.28
VDR-204ENST00000547065 GAGE13Q4V321 117 aa13.28□□□□□ -0.28
VDR-204ENST00000547065 A0A0J9YY99 117 aa13.27□□□□□ -0.28
VDR-204ENST00000547065 DGAT2L7PQ6IED9 249 aa13.27□□□□□ -0.28
VDR-204ENST00000547065 Q6ZUT4 128 aa13.27□□□□□ -0.28
VDR-204ENST00000547065 NSD1Q96L73 2696 aaPredicted RBP13.27□□□□□ -0.29
VDR-204ENST00000547065 FN1P02751 2386 aaKnown RBP13.27□□□□□ -0.29
VDR-204ENST00000547065 SMAGPQ0VAQ4 97 aa13.27□□□□□ -0.29
VDR-204ENST00000547065 SRSF9Q13242 221 aaKnown RBP eCLIP13.27□□□□□ -0.29
VDR-204ENST00000547065 C12orf74Q32Q52 190 aa13.27□□□□□ -0.29
VDR-204ENST00000547065 RNASE13Q5GAN3 156 aaKnown RBP13.27□□□□□ -0.29
VDR-204ENST00000547065 SPATA3Q8NHX4 192 aa13.27□□□□□ -0.29
VDR-204ENST00000547065 C2CD3Q4AC94 2353 aa13.27□□□□□ -0.29
VDR-204ENST00000547065 JMJD1CQ15652 2540 aa13.26□□□□□ -0.29
VDR-204ENST00000547065 TRGV4A0A0C4DH28 118 aa13.26□□□□□ -0.29
VDR-204ENST00000547065 GAGE10A6NGK3 116 aa13.26□□□□□ -0.29
VDR-204ENST00000547065 SMIM9A6NGZ8 99 aa13.26□□□□□ -0.29
VDR-204ENST00000547065 GTF2H5Q6ZYL4 71 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms