RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 APOC3P02656 99 aa11.31□□□□□ -0.6
CCDC38-203ENST00000546803 SVBPQ8N300 66 aa11.31□□□□□ -0.6
CCDC38-203ENST00000546803 RPS10P5Q9NQ39 176 aa11.31□□□□□ -0.6
CCDC38-203ENST00000546803 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 TRBV27A0A0K0K1C4 114 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 VCYO14598 125 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 SNAPINO95295 136 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
CCDC38-203ENST00000546803 TNP2Q05952 138 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 GAGE6Q13070 117 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 ATRAIDQ6UW56 229 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 KLK12Q9UKR0 248 aa11.3□□□□□ -0.6
CCDC38-203ENST00000546803 PHOX2AO14813 284 aa11.29□□□□□ -0.6
CCDC38-203ENST00000546803 APCSP02743 223 aa11.29□□□□□ -0.6
CCDC38-203ENST00000546803 Q9HAA7 133 aa11.29□□□□□ -0.6
CCDC38-203ENST00000546803 A0A1B0GVY2 172 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 D6R8Y8 96 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 UBE2L6O14933 153 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 TNFRSF6BO95407 300 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 RBX1P62877 108 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
CCDC38-203ENST00000546803 Q0VG73 95 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 ORMDL3Q8N138 153 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 DEFB104AQ8WTQ1 72 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 TM2D2Q9BX73 214 aa11.28□□□□□ -0.6
CCDC38-203ENST00000546803 A0A1B0GUV1 79 aa11.27□□□□□ -0.61
CCDC38-203ENST00000546803 H7C423 109 aa11.27□□□□□ -0.61
CCDC38-203ENST00000546803 ANGP03950 147 aaKnown RBP11.27□□□□□ -0.61
CCDC38-203ENST00000546803 TMEM136Q6ZRR5 245 aa11.27□□□□□ -0.61
CCDC38-203ENST00000546803 Q8N976 141 aa11.27□□□□□ -0.61
CCDC38-203ENST00000546803 RMI2Q96E14 147 aa11.27□□□□□ -0.61
CCDC38-203ENST00000546803 TSHBP01222 138 aa11.26□□□□□ -0.61
CCDC38-203ENST00000546803 UBE2WQ96B02 151 aa11.26□□□□□ -0.61
CCDC38-203ENST00000546803 KIR2DL4Q99706 377 aa11.26□□□□□ -0.61
CCDC38-203ENST00000546803 LAMTOR2Q9Y2Q5 125 aa11.26□□□□□ -0.61
CCDC38-203ENST00000546803 COX11Q9Y6N1 276 aa11.26□□□□□ -0.61
CCDC38-203ENST00000546803 TCAPO15273 167 aa11.25□□□□□ -0.61
CCDC38-203ENST00000546803 PSCAO43653 123 aa11.25□□□□□ -0.61
CCDC38-203ENST00000546803 CRPP02741 224 aa11.25□□□□□ -0.61
CCDC38-203ENST00000546803 ESDP10768 282 aa11.25□□□□□ -0.61
CCDC38-203ENST00000546803 COX19Q49B96 90 aa11.25□□□□□ -0.61
CCDC38-203ENST00000546803 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
CCDC38-203ENST00000546803 NPYP01303 97 aa11.24□□□□□ -0.61
CCDC38-203ENST00000546803 FCER1GP30273 86 aa11.24□□□□□ -0.61
CCDC38-203ENST00000546803 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
CCDC38-203ENST00000546803 EREGO14944 169 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 HLA-DQA1P01909 254 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 AMMECR1LQ6DCA0 310 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 ENHOQ6UWT2 76 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 PRR34Q9NV39 138 aa11.23□□□□□ -0.61
CCDC38-203ENST00000546803 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.22□□□□□ -0.61
CCDC38-203ENST00000546803 IGKV2-29A2NJV5 120 aaPredicted RBP11.22□□□□□ -0.61
CCDC38-203ENST00000546803 MIAQ16674 131 aa11.22□□□□□ -0.61
CCDC38-203ENST00000546803 IGLV4-60A0A075B6I1 120 aa11.21□□□□□ -0.61
CCDC38-203ENST00000546803 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.61
CCDC38-203ENST00000546803 A0A087WTM6 91 aa11.21□□□□□ -0.61
CCDC38-203ENST00000546803 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
CCDC38-203ENST00000546803 FGF6P10767 208 aa11.21□□□□□ -0.61
CCDC38-203ENST00000546803 ZNF25P17030 456 aaPredicted RBP11.21□□□□□ -0.61
CCDC38-203ENST00000546803 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.61
CCDC38-203ENST00000546803 C1orf43Q9BWL3 253 aa11.21□□□□□ -0.61
CCDC38-203ENST00000546803 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.62
CCDC38-203ENST00000546803 MT-ND6P03923 174 aa11.2□□□□□ -0.62
CCDC38-203ENST00000546803 REG3AQ06141 175 aa11.2□□□□□ -0.62
CCDC38-203ENST00000546803 SMAGPQ0VAQ4 97 aa11.2□□□□□ -0.62
CCDC38-203ENST00000546803 RNASEKQ6P5S7 137 aaKnown RBP11.2□□□□□ -0.62
CCDC38-203ENST00000546803 MAP1LC3AQ9H492 121 aa11.2□□□□□ -0.62
CCDC38-203ENST00000546803 MRPL52Q86TS9 123 aaKnown RBP11.19□□□□□ -0.62
CCDC38-203ENST00000546803 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
CCDC38-203ENST00000546803 DNAH2Q9P225 4427 aa11.19□□□□□ -0.62
CCDC38-203ENST00000546803 LRCOL1A6NCL2 159 aa11.18□□□□□ -0.62
CCDC38-203ENST00000546803 TMEM101Q96IK0 257 aa11.18□□□□□ -0.62
CCDC38-203ENST00000546803 TRAV8-4A0A0B4J246 113 aa11.17□□□□□ -0.62
CCDC38-203ENST00000546803 RAB5AP20339 215 aa11.17□□□□□ -0.62
CCDC38-203ENST00000546803 CLPSL2Q6UWE3 100 aa11.17□□□□□ -0.62
CCDC38-203ENST00000546803 OR5A1Q8NGJ0 315 aa11.17□□□□□ -0.62
CCDC38-203ENST00000546803 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
CCDC38-203ENST00000546803 SPATA12Q7Z6I5 190 aa11.16□□□□□ -0.62
CCDC38-203ENST00000546803 PGPEP1Q9NXJ5 209 aa11.16□□□□□ -0.62
CCDC38-203ENST00000546803 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
CCDC38-203ENST00000546803 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
CCDC38-203ENST00000546803 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
CCDC38-203ENST00000546803 DGAT2L7PQ6IED9 249 aa11.15□□□□□ -0.62
CCDC38-203ENST00000546803 MAPKAPK5-AS1Q8N8E1 139 aa11.15□□□□□ -0.62
CCDC38-203ENST00000546803 Q8N8P6 123 aa11.15□□□□□ -0.62
CCDC38-203ENST00000546803 TIMM21Q9BVV7 248 aa11.15□□□□□ -0.62
CCDC38-203ENST00000546803 K7EMI3 77 aa11.14□□□□□ -0.63
CCDC38-203ENST00000546803 FABP9Q0Z7S8 132 aa11.14□□□□□ -0.63
CCDC38-203ENST00000546803 MRPL18Q9H0U6 180 aaKnown RBP11.14□□□□□ -0.63
CCDC38-203ENST00000546803 NXT2Q9NPJ8 142 aaKnown RBP11.14□□□□□ -0.63
CCDC38-203ENST00000546803 SMCO4Q9NRQ5 59 aa11.14□□□□□ -0.63
CCDC38-203ENST00000546803 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
CCDC38-203ENST00000546803 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
CCDC38-203ENST00000546803 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
CCDC38-203ENST00000546803 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms