RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 HOXB4P17483 251 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-212ENST00000546744 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 ACACBO00763 2458 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 A0A087WW49 117 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 CCDC179H3BU77 68 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 ANGP03950 147 aaKnown RBP9.75□□□□□ -0.85
PTCH1-212ENST00000546744 ZNF80P51504 273 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-212ENST00000546744 MED12LQ86YW9 2145 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 TRBV27A0A0K0K1C4 114 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 UBE2D1P51668 147 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 C16orf74Q96GX8 76 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 C14orf132Q9NPU4 83 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 E7EUB6 86 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 Q6JHZ5 121 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 LYRM9A8MSI8 78 aa9.74□□□□□ -0.85
PTCH1-212ENST00000546744 F5H768 121 aa9.74□□□□□ -0.85
PTCH1-212ENST00000546744 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
PTCH1-212ENST00000546744 A0A0C4DFX4 3053 aa9.74□□□□□ -0.85
PTCH1-212ENST00000546744 H7C423 109 aa9.74□□□□□ -0.85
PTCH1-212ENST00000546744 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
PTCH1-212ENST00000546744 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
PTCH1-212ENST00000546744 Q8N7P7 452 aa9.73□□□□□ -0.85
PTCH1-212ENST00000546744 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
PTCH1-212ENST00000546744 IBA57-AS1B1ANH7 110 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 XCL1P47992 114 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 UBE2D3P61077 147 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 UBE2D2P62837 147 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 IGLV2-11P01706 119 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 APOC4P55056 127 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 NDUFB1O75438 58 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 EYSQ5T1H1 3165 aa9.72□□□□□ -0.85
PTCH1-212ENST00000546744 RUSC1-AS1Q66K80 236 aa9.71□□□□□ -0.85
PTCH1-212ENST00000546744 SDIM1Q6ZPB5 146 aa9.71□□□□□ -0.85
PTCH1-212ENST00000546744 NCOR2Q9Y618 2525 aa9.71□□□□□ -0.85
PTCH1-212ENST00000546744 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.85
PTCH1-212ENST00000546744 LY6HO94772 140 aa9.71□□□□□ -0.85
PTCH1-212ENST00000546744 HHLA3Q9XRX5 114 aa9.71□□□□□ -0.85
PTCH1-212ENST00000546744 CRIP1P50238 77 aa9.71□□□□□ -0.86
PTCH1-212ENST00000546744 AJUBAQ96IF1 538 aa9.71□□□□□ -0.86
PTCH1-212ENST00000546744 PLXNB1O43157 2135 aa9.71□□□□□ -0.86
PTCH1-212ENST00000546744 NRACQ8N912 160 aa9.7□□□□□ -0.86
PTCH1-212ENST00000546744 RITA1Q96K30 269 aa9.7□□□□□ -0.86
PTCH1-212ENST00000546744 MED13LQ71F56 2210 aa9.7□□□□□ -0.86
PTCH1-212ENST00000546744 C5orf56Q8N8D9 126 aa9.7□□□□□ -0.86
PTCH1-212ENST00000546744 ETDCA0A1B0GVM5 59 aa9.69□□□□□ -0.86
PTCH1-212ENST00000546744 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
PTCH1-212ENST00000546744 TNRC6BQ9UPQ9 1833 aaKnown RBP9.69□□□□□ -0.86
PTCH1-212ENST00000546744 BPY2O14599 106 aa9.69□□□□□ -0.86
PTCH1-212ENST00000546744 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
PTCH1-212ENST00000546744 INSL3P51460 131 aa9.68□□□□□ -0.86
PTCH1-212ENST00000546744 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
PTCH1-212ENST00000546744 BLCAPP62952 87 aa9.68□□□□□ -0.86
PTCH1-212ENST00000546744 Q9HAA7 133 aa9.68□□□□□ -0.86
PTCH1-212ENST00000546744 SPTBN5Q9NRC6 3674 aaKnown RBP9.68□□□□□ -0.86
PTCH1-212ENST00000546744 MUC7Q8TAX7 377 aa9.68□□□□□ -0.86
PTCH1-212ENST00000546744 IGF2-ASQ6U949 168 aa9.68□□□□□ -0.86
PTCH1-212ENST00000546744 NOP10Q9NPE3 64 aaKnown RBP9.67□□□□□ -0.86
PTCH1-212ENST00000546744 CHD8Q9HCK8 2581 aa9.67□□□□□ -0.86
PTCH1-212ENST00000546744 C1orf195Q5TG92 126 aa9.67□□□□□ -0.86
PTCH1-212ENST00000546744 COX8CQ7Z4L0 72 aa9.67□□□□□ -0.86
PTCH1-212ENST00000546744 COL5A1P20908 1838 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-212ENST00000546744 CFHR3Q02985 330 aa9.66□□□□□ -0.86
PTCH1-212ENST00000546744 VPREB3Q9UKI3 123 aa9.66□□□□□ -0.86
PTCH1-212ENST00000546744 PIK3CD-AS1Q5SR53 167 aa9.66□□□□□ -0.86
PTCH1-212ENST00000546744 POLR2KP53803 58 aaKnown RBP9.66□□□□□ -0.86
PTCH1-212ENST00000546744 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
PTCH1-212ENST00000546744 LINC00694P0DN24 101 aa9.65□□□□□ -0.86
PTCH1-212ENST00000546744 COX7BP24311 80 aa9.65□□□□□ -0.86
PTCH1-212ENST00000546744 SPRY2O43597 315 aa9.65□□□□□ -0.87
PTCH1-212ENST00000546744 SPRNQ5BIV9 151 aa9.65□□□□□ -0.87
PTCH1-212ENST00000546744 DSCAML1Q8TD84 2053 aa9.64□□□□□ -0.87
PTCH1-212ENST00000546744 CEP295Q9C0D2 2601 aa9.64□□□□□ -0.87
PTCH1-212ENST00000546744 M0QY20 66 aa9.64□□□□□ -0.87
PTCH1-212ENST00000546744 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
PTCH1-212ENST00000546744 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
PTCH1-212ENST00000546744 ADAMTS20P59510 1910 aa9.64□□□□□ -0.87
PTCH1-212ENST00000546744 EBI3Q14213 229 aa9.64□□□□□ -0.87
PTCH1-212ENST00000546744 UBE2BP63146 152 aa9.63□□□□□ -0.87
PTCH1-212ENST00000546744 ZFAND2AQ8N6M9 145 aa9.63□□□□□ -0.87
PTCH1-212ENST00000546744 K7ENP7 123 aa9.63□□□□□ -0.87
PTCH1-212ENST00000546744 DYSFO75923 2080 aa9.63□□□□□ -0.87
PTCH1-212ENST00000546744 PSCAO43653 123 aa9.63□□□□□ -0.87
PTCH1-212ENST00000546744 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
PTCH1-212ENST00000546744 HCFC1P51610 2035 aa9.63□□□□□ -0.87
PTCH1-212ENST00000546744 FAM19A3Q7Z5A8 133 aa9.62□□□□□ -0.87
PTCH1-212ENST00000546744 NRGNQ92686 78 aa9.62□□□□□ -0.87
PTCH1-212ENST00000546744 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
PTCH1-212ENST00000546744 ODF3BA8MYP8 253 aa9.62□□□□□ -0.87
PTCH1-212ENST00000546744 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
PTCH1-212ENST00000546744 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
PTCH1-212ENST00000546744 COL6A3P12111 3177 aa9.61□□□□□ -0.87
PTCH1-212ENST00000546744 IGF2RP11717 2491 aa9.61□□□□□ -0.87
PTCH1-212ENST00000546744 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
PTCH1-212ENST00000546744 SPG11Q96JI7 2443 aa9.61□□□□□ -0.87
PTCH1-212ENST00000546744 GYPEP15421 78 aa9.6□□□□□ -0.87
PTCH1-212ENST00000546744 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
PTCH1-212ENST00000546744 TANC2Q9HCD6 1990 aa9.6□□□□□ -0.87
PTCH1-212ENST00000546744 PTPN13Q12923 2485 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms