RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 LYZL1Q6UWQ5 148 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 Q6ZQT7 251 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 POM121L12Q8N7R1 296 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 CSNK1G2-AS1Q8NCQ2 148 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 FRZBQ92765 325 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BHQ93079 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BNQ99877 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BMQ99879 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 IGHV1OR15-1A0A075B7D0 117 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 IGHV3-16A0A0C4DH30 117 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 C9JAW5 83 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 INSP01308 110 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 TRGC2P03986 189 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 FRMD6-AS1P0C7T7 363 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 RIGQ13278 110 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 GTSCR1Q86UQ5 136 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 TMEM191AQ9H0A3 160 aa6.1□□□□□ -1.43
VPS29-203ENST00000546588 TRAV12-3A0A0B4J271 114 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 A6NDN8 102 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 SNURFLB1AK76 121 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 IGLL1P15814 213 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 GATA1P15976 413 aaPredicted RBP6.09□□□□□ -1.43
VPS29-203ENST00000546588 RPL35AP18077 110 aaKnown RBP6.09□□□□□ -1.43
VPS29-203ENST00000546588 RNASE4P34096 147 aaKnown RBP6.09□□□□□ -1.43
VPS29-203ENST00000546588 ASIPP42127 132 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 KPRPQ5T749 579 aaPredicted RBP6.09□□□□□ -1.43
VPS29-203ENST00000546588 MRPL54Q6P161 138 aaKnown RBP6.09□□□□□ -1.43
VPS29-203ENST00000546588 TEX43Q6ZNM6 134 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 C1orf158Q8N1D5 194 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 DEFB125Q8N687 156 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 BORCS7Q96B45 105 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 PGLYRP4Q96LB8 373 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 EDA2RQ9HAV5 297 aa6.09□□□□□ -1.43
VPS29-203ENST00000546588 JMJD1CQ15652 2540 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 ATP5LO75964 103 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 TMEM101Q96IK0 257 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 TMEM70Q9BUB7 260 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 WFDC10AQ9H1F0 79 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 KIF25-AS1Q9Y6Z4 181 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 U3KQK5 164 aa6.08□□□□□ -1.44
VPS29-203ENST00000546588 H3BVH4 76 aa6.07□□□□□ -1.44
VPS29-203ENST00000546588 TRGC1P0CF51 173 aa6.07□□□□□ -1.44
VPS29-203ENST00000546588 Q0VG73 95 aa6.07□□□□□ -1.44
VPS29-203ENST00000546588 FAM104BQ5XKR9 115 aa6.07□□□□□ -1.44
VPS29-203ENST00000546588 OR10AG1Q8NH19 301 aa6.07□□□□□ -1.44
VPS29-203ENST00000546588 PRSS3P2Q8NHM4 247 aa6.07□□□□□ -1.44
VPS29-203ENST00000546588 TMEM263Q8WUH6 116 aaKnown RBP6.07□□□□□ -1.44
VPS29-203ENST00000546588 TMSB15BA0A087X1C1 80 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 PLAC8L1A1L4L8 177 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 GRIFINA4D1Z8 144 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 GNRH2O43555 120 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 IGKV3-20P01619 116 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 SPINK8P0C7L1 97 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 MUC21Q5SSG8 566 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 RNF185Q96GF1 192 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 PRADC1Q9BSG0 188 aa6.06□□□□□ -1.44
VPS29-203ENST00000546588 M0R381 172 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 APCSP02743 223 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 LINC00315P59091 139 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 DAZ2Q13117 558 aaKnown RBP6.05□□□□□ -1.44
VPS29-203ENST00000546588 LGALS9BQ3B8N2 356 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 UFSP1Q6NVU6 142 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 RASL10AQ92737 203 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 C16orf74Q96GX8 76 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 C18orf15Q96N68 181 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 AP1S3Q96PC3 154 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 MDFICQ9P1T7 246 aa6.05□□□□□ -1.44
VPS29-203ENST00000546588 STAB1Q9NY15 2570 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 LINC01546A6NGU7 62 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 SPINK4O60575 86 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 S100A4P26447 101 aaKnown RBP6.04□□□□□ -1.44
VPS29-203ENST00000546588 KRTAP10-11P60412 298 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 AMMECR1LQ6DCA0 310 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 Q6ZN92 141 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 LINC00612Q8N6U2 182 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 C18orf32Q8TCD1 76 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 OVOL2Q9BRP0 275 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 DPH3P1Q9H4G8 78 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 XCL2Q9UBD3 114 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 PKIGQ9Y2B9 76 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 PHLDA3Q9Y5J5 127 aa6.04□□□□□ -1.44
VPS29-203ENST00000546588 hDV102S1A0JD36 115 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 M0R2P5 195 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 APOC4P55056 127 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 FXYD7P58549 80 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 TWIST1Q15672 202 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 MRPL51Q4U2R6 128 aaKnown RBP6.03□□□□□ -1.44
VPS29-203ENST00000546588 PAPPA-AS1Q5QFB9 102 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 SPANXN1Q5VSR9 72 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 AMN1Q8IY45 258 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 PKD1L1Q8TDX9 2849 aa6.03□□□□□ -1.44
VPS29-203ENST00000546588 A8MWV9 139 aa6.02□□□□□ -1.45
VPS29-203ENST00000546588 NDUFC2O95298 119 aa6.02□□□□□ -1.45
VPS29-203ENST00000546588 MEIG1Q5JSS6 88 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms