RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 Q6ZSV7 163 aa9.64□□□□□ -0.87
CHD4-211ENST00000544484 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
CHD4-211ENST00000544484 H0YGX0 51 aa9.64□□□□□ -0.87
CHD4-211ENST00000544484 CLEC2BQ92478 149 aa9.64□□□□□ -0.87
CHD4-211ENST00000544484 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
CHD4-211ENST00000544484 IGHV1-58A0A0C4DH39 117 aa9.63□□□□□ -0.87
CHD4-211ENST00000544484 LECT2O14960 151 aa9.63□□□□□ -0.87
CHD4-211ENST00000544484 LINC01620Q4KN68 170 aa9.63□□□□□ -0.87
CHD4-211ENST00000544484 CDSNQ15517 529 aa9.63□□□□□ -0.87
CHD4-211ENST00000544484 LINC00482Q8N8I6 264 aa9.63□□□□□ -0.87
CHD4-211ENST00000544484 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
CHD4-211ENST00000544484 TNRC6BQ9UPQ9 1833 aaKnown RBP9.62□□□□□ -0.87
CHD4-211ENST00000544484 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
CHD4-211ENST00000544484 TLN2Q9Y4G6 2542 aa9.62□□□□□ -0.87
CHD4-211ENST00000544484 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
CHD4-211ENST00000544484 TRBV10-1A0A0K0K1A3 114 aa9.62□□□□□ -0.87
CHD4-211ENST00000544484 EBI3Q14213 229 aa9.62□□□□□ -0.87
CHD4-211ENST00000544484 NDUFA11Q86Y39 141 aa9.62□□□□□ -0.87
CHD4-211ENST00000544484 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHD4-211ENST00000544484 HIGD1BQ9P298 99 aa9.62□□□□□ -0.87
CHD4-211ENST00000544484 TAX1BP3O14907 124 aa9.61□□□□□ -0.87
CHD4-211ENST00000544484 IGKV3D-7A0A0C4DH55 119 aa9.61□□□□□ -0.87
CHD4-211ENST00000544484 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
CHD4-211ENST00000544484 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
CHD4-211ENST00000544484 LGALS9O00182 355 aa9.61□□□□□ -0.87
CHD4-211ENST00000544484 CRIP1P50238 77 aa9.61□□□□□ -0.87
CHD4-211ENST00000544484 HCFC1P51610 2035 aa9.61□□□□□ -0.87
CHD4-211ENST00000544484 FAM110AQ9BQ89 295 aa9.6□□□□□ -0.87
CHD4-211ENST00000544484 FSTL3O95633 263 aa9.6□□□□□ -0.87
CHD4-211ENST00000544484 NFE4Q86UQ8 179 aa9.6□□□□□ -0.87
CHD4-211ENST00000544484 ZFYVE26Q68DK2 2539 aa9.6□□□□□ -0.87
CHD4-211ENST00000544484 UBE2AP49459 152 aa9.59□□□□□ -0.87
CHD4-211ENST00000544484 Q6ZS46 218 aa9.59□□□□□ -0.87
CHD4-211ENST00000544484 LINC00467Q9BRT7 94 aa9.59□□□□□ -0.87
CHD4-211ENST00000544484 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
CHD4-211ENST00000544484 PROK1P58294 105 aa9.59□□□□□ -0.87
CHD4-211ENST00000544484 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
CHD4-211ENST00000544484 CEP295Q9C0D2 2601 aa9.58□□□□□ -0.88
CHD4-211ENST00000544484 TM2D2Q9BX73 214 aa9.58□□□□□ -0.88
CHD4-211ENST00000544484 CXCL5P42830 114 aa9.58□□□□□ -0.88
CHD4-211ENST00000544484 ZFAND2AQ8N6M9 145 aa9.58□□□□□ -0.88
CHD4-211ENST00000544484 C18orf65Q6ZTR6 163 aa9.57□□□□□ -0.88
CHD4-211ENST00000544484 MBD6Q96DN6 1003 aa9.57□□□□□ -0.88
CHD4-211ENST00000544484 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
CHD4-211ENST00000544484 KLK5Q9Y337 293 aaPredicted RBP9.57□□□□□ -0.88
CHD4-211ENST00000544484 PTH2Q96A98 100 aa9.57□□□□□ -0.88
CHD4-211ENST00000544484 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
CHD4-211ENST00000544484 MUC22E2RYF6 1773 aaPredicted RBP9.57□□□□□ -0.88
CHD4-211ENST00000544484 REG3AQ06141 175 aa9.57□□□□□ -0.88
CHD4-211ENST00000544484 CDKN2A-AS1Q9UH64 79 aa9.56□□□□□ -0.88
CHD4-211ENST00000544484 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
CHD4-211ENST00000544484 SETD2Q9BYW2 2564 aaPredicted RBP9.56□□□□□ -0.88
CHD4-211ENST00000544484 WFDC10AQ9H1F0 79 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 ABCA12Q86UK0 2595 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 LY6G6DO95868 133 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 PRB2P02812 416 aaPredicted RBP9.55□□□□□ -0.88
CHD4-211ENST00000544484 NEXN-AS1Q8NBZ9 246 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 PRM2P04554 102 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 NREPQ16612 68 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 PKIGQ9Y2B9 76 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 PSMB8P28062 276 aa9.55□□□□□ -0.88
CHD4-211ENST00000544484 ZNF702PQ9H963 129 aa9.54□□□□□ -0.88
CHD4-211ENST00000544484 ACYP1P07311 99 aa9.54□□□□□ -0.88
CHD4-211ENST00000544484 USP9XQ93008 2570 aaPredicted RBP9.54□□□□□ -0.88
CHD4-211ENST00000544484 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
CHD4-211ENST00000544484 Q8N976 141 aa9.54□□□□□ -0.88
CHD4-211ENST00000544484 DEFB131BA0A096LNP1 70 aa9.54□□□□□ -0.88
CHD4-211ENST00000544484 CFAP126Q5VTH2 177 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
CHD4-211ENST00000544484 MIAQ16674 131 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 Q8N6K4 173 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
CHD4-211ENST00000544484 C10orf142B7Z368 130 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 TRBV10-2A0A0K0K1G8 114 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 B5MCH6 92 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 RBM3P98179 157 aaKnown RBP9.53□□□□□ -0.88
CHD4-211ENST00000544484 IGKV2D-26A0A0A0MRZ7 120 aa9.53□□□□□ -0.88
CHD4-211ENST00000544484 IGLV4-3A0A075B6K6 122 aa9.52□□□□□ -0.88
CHD4-211ENST00000544484 IGLV2-11P01706 119 aa9.52□□□□□ -0.88
CHD4-211ENST00000544484 M0QY20 66 aa9.52□□□□□ -0.89
CHD4-211ENST00000544484 ANKRD11Q6UB99 2663 aaPredicted RBP9.52□□□□□ -0.89
CHD4-211ENST00000544484 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
CHD4-211ENST00000544484 PSMG3-AS1Q96PY0 264 aa9.52□□□□□ -0.89
CHD4-211ENST00000544484 FOXI1Q12951 378 aa9.51□□□□□ -0.89
CHD4-211ENST00000544484 PRR9Q5T870 116 aa9.51□□□□□ -0.89
CHD4-211ENST00000544484 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
CHD4-211ENST00000544484 AVPP01185 164 aa9.51□□□□□ -0.89
CHD4-211ENST00000544484 SMIM9A6NGZ8 99 aa9.51□□□□□ -0.89
CHD4-211ENST00000544484 ZNF22P17026 224 aaPredicted RBP9.51□□□□□ -0.89
CHD4-211ENST00000544484 SPANXDQ9BXN6 97 aa9.51□□□□□ -0.89
CHD4-211ENST00000544484 C11orf21Q9P2W6 132 aa9.5□□□□□ -0.89
CHD4-211ENST00000544484 FAM236AA0A1B0GUQ0 79 aa9.5□□□□□ -0.89
CHD4-211ENST00000544484 FAM236BA0A1B0GV22 79 aa9.5□□□□□ -0.89
CHD4-211ENST00000544484 CRYGDP07320 174 aa9.5□□□□□ -0.89
CHD4-211ENST00000544484 TCL1BO95988 128 aa9.5□□□□□ -0.89
CHD4-211ENST00000544484 HIGD2AQ9BW72 106 aa9.5□□□□□ -0.89
CHD4-211ENST00000544484 A0A1B0GX51 115 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 356.2 ms