RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 Q6ZTI0 123 aa7.85□□□□□ -1.15
PCDH9-204ENST00000544246 TP53TG3Q9ULZ0 132 aa7.85□□□□□ -1.15
PCDH9-204ENST00000544246 ARFGEF3Q5TH69 2177 aa7.85□□□□□ -1.15
PCDH9-204ENST00000544246 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.85□□□□□ -1.15
PCDH9-204ENST00000544246 ODF3Q96PU9 254 aa7.85□□□□□ -1.15
PCDH9-204ENST00000544246 SLX1AQ9BQ83 275 aa7.85□□□□□ -1.15
PCDH9-204ENST00000544246 ANAPC1Q9H1A4 1944 aa7.85□□□□□ -1.15
PCDH9-204ENST00000544246 ALPK3Q96L96 1907 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 UBE2D2P62837 147 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 LINC00322Q6ZN03 302 aaPredicted RBP7.84□□□□□ -1.15
PCDH9-204ENST00000544246 C19orf71A6NCJ1 209 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 ZFP36P26651 326 aaKnown RBP7.84□□□□□ -1.15
PCDH9-204ENST00000544246 NEXN-AS1Q8NBZ9 246 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 TRIAP1O43715 76 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 SYCNQ0VAF6 134 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 UNQ9165/PRO28630Q6UXU0 137 aa7.84□□□□□ -1.15
PCDH9-204ENST00000544246 ADAMTS9Q9P2N4 1935 aa7.83□□□□□ -1.16
PCDH9-204ENST00000544246 C6orf99Q4VX62 202 aa7.83□□□□□ -1.16
PCDH9-204ENST00000544246 TSC2P49815 1807 aa7.83□□□□□ -1.16
PCDH9-204ENST00000544246 CREBBPQ92793 2442 aa7.83□□□□□ -1.16
PCDH9-204ENST00000544246 PTPRQQ9UMZ3 2332 aa7.83□□□□□ -1.16
PCDH9-204ENST00000544246 WFDC10AQ9H1F0 79 aa7.83□□□□□ -1.16
PCDH9-204ENST00000544246 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
PCDH9-204ENST00000544246 IGKV2-28A0A075B6P5 120 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 DNAJC9-AS1A6NH13 148 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 IGKV2D-28P01615 120 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 CDKN2A-AS1Q9UH64 79 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 A6NDX4 124 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 M0R378 163 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 ZNF843Q8N446 348 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 TP53BP1Q12888 1972 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-204ENST00000544246 IGLV9-49A0A0B4J1Y8 123 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 IMUPQ9GZP8 106 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-204ENST00000544246 RETNQ9HD89 108 aa7.82□□□□□ -1.16
PCDH9-204ENST00000544246 SPTAN1Q13813 2472 aaKnown RBP7.81□□□□□ -1.16
PCDH9-204ENST00000544246 MRPS12O15235 138 aaKnown RBP7.81□□□□□ -1.16
PCDH9-204ENST00000544246 LRRC75A-AS1Q8N1F1 130 aa7.81□□□□□ -1.16
PCDH9-204ENST00000544246 Q8N7P7 452 aa7.81□□□□□ -1.16
PCDH9-204ENST00000544246 OTOGLQ3ZCN5 2332 aa7.81□□□□□ -1.16
PCDH9-204ENST00000544246 NRGNQ92686 78 aa7.81□□□□□ -1.16
PCDH9-204ENST00000544246 KRTAP27-1Q3LI81 207 aa7.81□□□□□ -1.16
PCDH9-204ENST00000544246 ODF3L1Q8IXM7 274 aa7.81□□□□□ -1.16
PCDH9-204ENST00000544246 MRPS36P82909 103 aaKnown RBP7.81□□□□□ -1.16
PCDH9-204ENST00000544246 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 PRYO14603 147 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 COX7CP15954 63 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 ZNF524Q96C55 264 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 PTPRDP23468 1912 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 DAZAP2Q15038 168 aaPredicted RBP7.8□□□□□ -1.16
PCDH9-204ENST00000544246 HEATR5AQ86XA9 2040 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 TRBV6-5A0A0K0K1A5 114 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 MIFP14174 115 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 TRBV6-8A0A0A6YYG3 113 aa7.8□□□□□ -1.16
PCDH9-204ENST00000544246 SMIM26A0A096LP01 95 aa7.79□□□□□ -1.16
PCDH9-204ENST00000544246 DOCK11Q5JSL3 2073 aa7.79□□□□□ -1.16
PCDH9-204ENST00000544246 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
PCDH9-204ENST00000544246 A0A1B0GXF2 115 aa7.79□□□□□ -1.16
PCDH9-204ENST00000544246 PLAC8L1A1L4L8 177 aa7.79□□□□□ -1.16
PCDH9-204ENST00000544246 FRMD6-AS1P0C7T7 363 aa7.79□□□□□ -1.16
PCDH9-204ENST00000544246 ZNF80P51504 273 aaPredicted RBP7.79□□□□□ -1.16
PCDH9-204ENST00000544246 TNRC6AQ8NDV7 1962 aaKnown RBP7.79□□□□□ -1.16
PCDH9-204ENST00000544246 SPTBN1Q01082 2364 aaKnown RBP7.79□□□□□ -1.16
PCDH9-204ENST00000544246 Q6ZQY7 126 aa7.78□□□□□ -1.16
PCDH9-204ENST00000544246 PLA2G2EQ9NZK7 142 aa7.78□□□□□ -1.16
PCDH9-204ENST00000544246 FAM208BQ5VWN6 2430 aa7.78□□□□□ -1.16
PCDH9-204ENST00000544246 ADORA2A-AS1P86434 159 aa7.78□□□□□ -1.16
PCDH9-204ENST00000544246 TRAV10A0A0B4J240 114 aa7.77□□□□□ -1.16
PCDH9-204ENST00000544246 EBI3Q14213 229 aa7.77□□□□□ -1.16
PCDH9-204ENST00000544246 CFAP126Q5VTH2 177 aa7.77□□□□□ -1.16
PCDH9-204ENST00000544246 CCDC140Q96MF4 163 aa7.77□□□□□ -1.16
PCDH9-204ENST00000544246 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
PCDH9-204ENST00000544246 ESRGQ1W209 222 aa7.77□□□□□ -1.17
PCDH9-204ENST00000544246 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
PCDH9-204ENST00000544246 CCDC179H3BU77 68 aa7.77□□□□□ -1.17
PCDH9-204ENST00000544246 IGLV1-47P01700 117 aa7.77□□□□□ -1.17
PCDH9-204ENST00000544246 C22orf34Q6ZV56 151 aa7.77□□□□□ -1.17
PCDH9-204ENST00000544246 X6R8D5 127 aa7.77□□□□□ -1.17
PCDH9-204ENST00000544246 HELZP42694 1942 aaKnown RBP7.77□□□□□ -1.17
PCDH9-204ENST00000544246 E7EUB6 86 aa7.76□□□□□ -1.17
PCDH9-204ENST00000544246 TRBV6-4A0A1B0GX49 114 aa7.76□□□□□ -1.17
PCDH9-204ENST00000544246 Q6JHZ5 121 aa7.76□□□□□ -1.17
PCDH9-204ENST00000544246 TRBV7-6A0A0J9YX20 115 aa7.76□□□□□ -1.17
PCDH9-204ENST00000544246 RPL37AP8A6NKH3 93 aa7.76□□□□□ -1.17
PCDH9-204ENST00000544246 LINC00474Q9P2X8 69 aa7.76□□□□□ -1.17
PCDH9-204ENST00000544246 POLEQ07864 2286 aa7.76□□□□□ -1.17
PCDH9-204ENST00000544246 LINC01548A6NM66 108 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 PLA2G2AP14555 144 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 IGFL2Q6UWQ7 119 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 ZGRF1Q86YA3 2104 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 SRCAPQ6ZRS2 3230 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 LINC00694P0DN24 101 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 DEFB114Q30KQ6 69 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 CD164L2Q6UWJ8 174 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.75□□□□□ -1.17
PCDH9-204ENST00000544246 CACNA1DQ01668 2161 aa7.75□□□□□ -1.17
PCDH9-204ENST00000544246 ACACBO00763 2458 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms