RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MRPS12O15235 138 aaKnown RBP11.63□□□□□ -0.55
CHD4-210ENST00000544040 LINC00308Q8TCZ7 52 aa11.63□□□□□ -0.55
CHD4-210ENST00000544040 NLRC5Q86WI3 1866 aa11.63□□□□□ -0.55
CHD4-210ENST00000544040 A8MZ25 164 aa11.62□□□□□ -0.55
CHD4-210ENST00000544040 FAM222AQ5U5X8 452 aa11.62□□□□□ -0.55
CHD4-210ENST00000544040 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
CHD4-210ENST00000544040 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.62□□□□□ -0.55
CHD4-210ENST00000544040 Q6ZSR3 168 aa11.62□□□□□ -0.55
CHD4-210ENST00000544040 IGHV4-30-4P0DP06 118 aa11.62□□□□□ -0.55
CHD4-210ENST00000544040 IGHV4-31P0DP07 118 aa11.62□□□□□ -0.55
CHD4-210ENST00000544040 PROK1P58294 105 aa11.62□□□□□ -0.55
CHD4-210ENST00000544040 CCKP06307 115 aa11.61□□□□□ -0.55
CHD4-210ENST00000544040 PPDPFQ9H3Y8 114 aa11.61□□□□□ -0.55
CHD4-210ENST00000544040 IGLV4-3A0A075B6K6 122 aa11.61□□□□□ -0.55
CHD4-210ENST00000544040 WFDC13Q8IUB5 93 aa11.61□□□□□ -0.55
CHD4-210ENST00000544040 A6NDX4 124 aa11.61□□□□□ -0.55
CHD4-210ENST00000544040 ACACAQ13085 2346 aa11.61□□□□□ -0.55
CHD4-210ENST00000544040 DNAJC9-AS1A6NH13 148 aa11.61□□□□□ -0.55
CHD4-210ENST00000544040 A6NED7 52 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 C11orf1Q9H5F2 150 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 PLCE1Q9P212 2302 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 IGKV2-28A0A075B6P5 120 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 IGKV2D-28P01615 120 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 IGFL2Q6UWQ7 119 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 PRR15LQ9BU68 103 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 MSMPQ1L6U9 139 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 MALRD1Q5VYJ5 2156 aa11.6□□□□□ -0.55
CHD4-210ENST00000544040 SPTAN1Q13813 2472 aaKnown RBP11.59□□□□□ -0.55
CHD4-210ENST00000544040 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
CHD4-210ENST00000544040 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.58□□□□□ -0.559e-7■■■■□ 21.3
CHD4-210ENST00000544040 MED13Q9UHV7 2174 aa11.58□□□□□ -0.56
CHD4-210ENST00000544040 WISP2O76076 250 aa11.58□□□□□ -0.56
CHD4-210ENST00000544040 CCDC179H3BU77 68 aa11.58□□□□□ -0.56
CHD4-210ENST00000544040 C14orf177Q52M58 125 aa11.58□□□□□ -0.56
CHD4-210ENST00000544040 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
CHD4-210ENST00000544040 ATP5EP2Q5VTU8 51 aa11.57□□□□□ -0.56
CHD4-210ENST00000544040 TMEM89A2RUT3 159 aa11.57□□□□□ -0.56
CHD4-210ENST00000544040 FAM30AQ9NZY2 134 aa11.57□□□□□ -0.56
CHD4-210ENST00000544040 OBSL1O75147 1896 aa11.57□□□□□ -0.56
CHD4-210ENST00000544040 PCNX2A6NKB5 2137 aa11.57□□□□□ -0.56
CHD4-210ENST00000544040 NDUFA7O95182 113 aa11.56□□□□□ -0.56
CHD4-210ENST00000544040 TIMM17BO60830 172 aa11.56□□□□□ -0.56
CHD4-210ENST00000544040 TRBV30A0A0K0K1B3 111 aa11.55□□□□□ -0.56
CHD4-210ENST00000544040 Q8N976 141 aa11.55□□□□□ -0.56
CHD4-210ENST00000544040 CFAP126Q5VTH2 177 aa11.55□□□□□ -0.56
CHD4-210ENST00000544040 ZGRF1Q86YA3 2104 aa11.55□□□□□ -0.56
CHD4-210ENST00000544040 DEFB131BA0A096LNP1 70 aa11.55□□□□□ -0.56
CHD4-210ENST00000544040 IBA57-AS1B1ANH7 110 aa11.54□□□□□ -0.56
CHD4-210ENST00000544040 C1orf229Q6ZS94 237 aaPredicted RBP11.54□□□□□ -0.56
CHD4-210ENST00000544040 LINC00482Q8N8I6 264 aa11.54□□□□□ -0.56
CHD4-210ENST00000544040 SHANK1Q9Y566 2161 aa11.54□□□□□ -0.56
CHD4-210ENST00000544040 TRBV6-5A0A0K0K1A5 114 aa11.54□□□□□ -0.56
CHD4-210ENST00000544040 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
CHD4-210ENST00000544040 POM121L12Q8N7R1 296 aa11.54□□□□□ -0.56
CHD4-210ENST00000544040 CRIP1P50238 77 aa11.53□□□□□ -0.56
CHD4-210ENST00000544040 C22orf34Q6ZV56 151 aa11.53□□□□□ -0.56
CHD4-210ENST00000544040 SPRY4Q9C004 299 aa11.53□□□□□ -0.56
CHD4-210ENST00000544040 SERP2Q8N6R1 65 aa11.52□□□□□ -0.56
CHD4-210ENST00000544040 RNF185Q96GF1 192 aa11.52□□□□□ -0.56
CHD4-210ENST00000544040 C9orf85Q96MD7 179 aa11.52□□□□□ -0.56
CHD4-210ENST00000544040 MBD6Q96DN6 1003 aa11.52□□□□□ -0.57
CHD4-210ENST00000544040 TRBV6-8A0A0A6YYG3 113 aa11.52□□□□□ -0.57
CHD4-210ENST00000544040 INSL3P51460 131 aa11.52□□□□□ -0.57
CHD4-210ENST00000544040 M0QY20 66 aa11.52□□□□□ -0.57
CHD4-210ENST00000544040 KIR2DL5BQ8NHK3 375 aa11.52□□□□□ -0.57
CHD4-210ENST00000544040 BRWD1-AS2P59051 145 aa11.52□□□□□ -0.57
CHD4-210ENST00000544040 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
CHD4-210ENST00000544040 FAM19A3Q7Z5A8 133 aa11.51□□□□□ -0.57
CHD4-210ENST00000544040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.51□□□□□ -0.57
CHD4-210ENST00000544040 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
CHD4-210ENST00000544040 P0C879 139 aa11.51□□□□□ -0.57
CHD4-210ENST00000544040 H7C423 109 aa11.51□□□□□ -0.57
CHD4-210ENST00000544040 Q6ZQY7 126 aa11.51□□□□□ -0.57
CHD4-210ENST00000544040 DAZAP2Q15038 168 aaPredicted RBP11.5□□□□□ -0.57
CHD4-210ENST00000544040 LYRM9A8MSI8 78 aa11.5□□□□□ -0.57
CHD4-210ENST00000544040 DEFB114Q30KQ6 69 aa11.5□□□□□ -0.57
CHD4-210ENST00000544040 ODF3Q96PU9 254 aa11.49□□□□□ -0.57
CHD4-210ENST00000544040 SERP1Q9Y6X1 66 aa11.49□□□□□ -0.57
CHD4-210ENST00000544040 ODF3BA8MYP8 253 aa11.49□□□□□ -0.57
CHD4-210ENST00000544040 K7EQG2 157 aa11.49□□□□□ -0.57
CHD4-210ENST00000544040 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
CHD4-210ENST00000544040 C1orf195Q5TG92 126 aa11.49□□□□□ -0.57
CHD4-210ENST00000544040 LY6LH3BQJ8 138 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 RBX1P62877 108 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 BBC3Q96PG8 261 aaPredicted RBP11.48□□□□□ -0.57
CHD4-210ENST00000544040 IGLV2-18A0A075B6J9 118 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 Q6ZPA2 131 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 SYCNQ0VAF6 134 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 C10orf99Q6UWK7 81 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 LOC100131303A0A0U1RQF7 123 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 SMIM11BQ8TCY0 68 aa11.48□□□□□ -0.57
CHD4-210ENST00000544040 Q8N9L7 120 aa11.47□□□□□ -0.57
CHD4-210ENST00000544040 DENND4CQ5VZ89 1909 aa11.47□□□□□ -0.57
CHD4-210ENST00000544040 A0A1W2PNU3 283 aaPredicted RBP11.47□□□□□ -0.57
CHD4-210ENST00000544040 ATP5EP56381 51 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 283.5 ms