RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 S100PP25815 95 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 AMTP48728 403 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 GAGE6Q13070 117 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 TMEM243Q9BU79 118 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 CHCHD7Q9BUK0 85 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 EPPK1P58107 5090 aaKnown RBP10.15□□□□□ -0.79
CD9-210ENST00000543916 I3L3M4 83 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 PPP1R17O96001 155 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 TSHBP01222 138 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 SUMO2P61956 95 aaKnown RBP10.14□□□□□ -0.79
CD9-210ENST00000543916 TNP2Q05952 138 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 LAGE3Q14657 143 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 TMEM136Q6ZRR5 245 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 FAT2Q9NYQ8 4349 aa10.14□□□□□ -0.79
CD9-210ENST00000543916 TRBV24-1A0A075B6N3 115 aa10.13□□□□□ -0.79
CD9-210ENST00000543916 TRBV27A0A0K0K1C4 114 aa10.13□□□□□ -0.79
CD9-210ENST00000543916 TNFRSF6BO95407 300 aa10.13□□□□□ -0.79
CD9-210ENST00000543916 NPYP01303 97 aa10.13□□□□□ -0.79
CD9-210ENST00000543916 Q8N976 141 aa10.13□□□□□ -0.79
CD9-210ENST00000543916 Q9HAA7 133 aa10.13□□□□□ -0.79
CD9-210ENST00000543916 KLK12Q9UKR0 248 aa10.13□□□□□ -0.79
CD9-210ENST00000543916 APCSP02743 223 aa10.12□□□□□ -0.79
CD9-210ENST00000543916 PPBPP02775 128 aa10.12□□□□□ -0.79
CD9-210ENST00000543916 PKIAP61925 76 aa10.12□□□□□ -0.79
CD9-210ENST00000543916 RBX1P62877 108 aa10.12□□□□□ -0.79
CD9-210ENST00000543916 NFE4Q86UQ8 179 aa10.12□□□□□ -0.79
CD9-210ENST00000543916 ORMDL3Q8N138 153 aa10.12□□□□□ -0.79
CD9-210ENST00000543916 A0A1B0GVY2 172 aa10.11□□□□□ -0.79
CD9-210ENST00000543916 PRELID3AQ96N28 172 aa10.11□□□□□ -0.79
CD9-210ENST00000543916 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
CD9-210ENST00000543916 PKD1P98161 4303 aa10.1□□□□□ -0.79
CD9-210ENST00000543916 HECTD4Q9Y4D8 3996 aa10.1□□□□□ -0.79
CD9-210ENST00000543916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
CD9-210ENST00000543916 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
CD9-210ENST00000543916 VCYO14598 125 aa10.1□□□□□ -0.79
CD9-210ENST00000543916 PHOX2AO14813 284 aa10.1□□□□□ -0.79
CD9-210ENST00000543916 ANGP03950 147 aaKnown RBP10.1□□□□□ -0.79
CD9-210ENST00000543916 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
CD9-210ENST00000543916 ELOBQ15370 118 aa10.1□□□□□ -0.79
CD9-210ENST00000543916 SMIM2Q9BVW6 85 aa10.1□□□□□ -0.79
CD9-210ENST00000543916 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
CD9-210ENST00000543916 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
CD9-210ENST00000543916 UBE2L6O14933 153 aa10.09□□□□□ -0.79
CD9-210ENST00000543916 ESDP10768 282 aa10.09□□□□□ -0.79
CD9-210ENST00000543916 UBE2WQ96B02 151 aa10.09□□□□□ -0.79
CD9-210ENST00000543916 TRAV8-3A0A0A6YYJ7 113 aa10.08□□□□□ -0.8
CD9-210ENST00000543916 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
CD9-210ENST00000543916 ENHOQ6UWT2 76 aa10.08□□□□□ -0.8
CD9-210ENST00000543916 C20orf203Q8NBC4 194 aa10.08□□□□□ -0.8
CD9-210ENST00000543916 GNB1LQ9BYB4 327 aa10.08□□□□□ -0.8
CD9-210ENST00000543916 A0A1B0GUV1 79 aa10.07□□□□□ -0.8
CD9-210ENST00000543916 FCER1GP30273 86 aa10.07□□□□□ -0.8
CD9-210ENST00000543916 KIAA1644Q3SXP7 199 aa10.07□□□□□ -0.8
CD9-210ENST00000543916 CLPSL2Q6UWE3 100 aa10.07□□□□□ -0.8
CD9-210ENST00000543916 KIR2DL4Q99706 377 aa10.07□□□□□ -0.8
CD9-210ENST00000543916 LAMTOR2Q9Y2Q5 125 aa10.07□□□□□ -0.8
CD9-210ENST00000543916 H7C423 109 aa10.06□□□□□ -0.8
CD9-210ENST00000543916 FGF6P10767 208 aa10.06□□□□□ -0.8
CD9-210ENST00000543916 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
CD9-210ENST00000543916 YPEL4Q96NS1 127 aa10.06□□□□□ -0.8
CD9-210ENST00000543916 PRR34Q9NV39 138 aa10.06□□□□□ -0.8
CD9-210ENST00000543916 PRSS47A8MTI9 375 aa10.05□□□□□ -0.8
CD9-210ENST00000543916 PSCAO43653 123 aa10.05□□□□□ -0.8
CD9-210ENST00000543916 CRPP02741 224 aa10.05□□□□□ -0.8
CD9-210ENST00000543916 Q0VG73 95 aa10.05□□□□□ -0.8
CD9-210ENST00000543916 COX19Q49B96 90 aa10.05□□□□□ -0.8
CD9-210ENST00000543916 AMMECR1LQ6DCA0 310 aa10.05□□□□□ -0.8
CD9-210ENST00000543916 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
CD9-210ENST00000543916 IGKV2D-24A0A075B6R9 120 aa10.04□□□□□ -0.8
CD9-210ENST00000543916 LOC389332A0A1B0GUA5 103 aa10.04□□□□□ -0.8
CD9-210ENST00000543916 TCAPO15273 167 aa10.04□□□□□ -0.8
CD9-210ENST00000543916 MT-ND6P03923 174 aa10.04□□□□□ -0.8
CD9-210ENST00000543916 RNASEKQ6P5S7 137 aaKnown RBP10.04□□□□□ -0.8
CD9-210ENST00000543916 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
CD9-210ENST00000543916 TM2D2Q9BX73 214 aa10.04□□□□□ -0.8
CD9-210ENST00000543916 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
CD9-210ENST00000543916 DNAH11Q96DT5 4516 aa10.04□□□□□ -0.8
CD9-210ENST00000543916 LRCOL1A6NCL2 159 aa10.03□□□□□ -0.8
CD9-210ENST00000543916 REG3AQ06141 175 aa10.03□□□□□ -0.8
CD9-210ENST00000543916 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
CD9-210ENST00000543916 MAPKAPK5-AS1Q8N8E1 139 aa10.03□□□□□ -0.8
CD9-210ENST00000543916 RMI2Q96E14 147 aa10.03□□□□□ -0.8
CD9-210ENST00000543916 A0A087WTM6 91 aa10.02□□□□□ -0.81
CD9-210ENST00000543916 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
CD9-210ENST00000543916 MIAQ16674 131 aa10.02□□□□□ -0.81
CD9-210ENST00000543916 ALKBH7Q9BT30 221 aaPredicted RBP10.02□□□□□ -0.81
CD9-210ENST00000543916 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
CD9-210ENST00000543916 WFDC2Q14508 124 aa10.01□□□□□ -0.81
CD9-210ENST00000543916 Q8N8P6 123 aa10.01□□□□□ -0.81
CD9-210ENST00000543916 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
CD9-210ENST00000543916 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
CD9-210ENST00000543916 COX11Q9Y6N1 276 aa10.01□□□□□ -0.81
CD9-210ENST00000543916 RPL39P62891 51 aaKnown RBP10□□□□□ -0.81
CD9-210ENST00000543916 KRTAP26-1Q6PEX3 210 aa10□□□□□ -0.81
CD9-210ENST00000543916 OR5A1Q8NGJ0 315 aa10□□□□□ -0.81
CD9-210ENST00000543916 TMEM101Q96IK0 257 aa10□□□□□ -0.81
CD9-210ENST00000543916 UBE2D4Q9Y2X8 147 aa10□□□□□ -0.81
CD9-210ENST00000543916 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
CD9-210ENST00000543916 LECT2O14960 151 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms