RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	TRGC2	P03986	189 aa		6.96	□□□□□ -1.3
CPSF7-221	ENST00000543545	GAGE6	Q13070	117 aa		6.96	□□□□□ -1.3
CPSF7-221	ENST00000543545	PRSS3P2	Q8NHM4	247 aa		6.96	□□□□□ -1.3
CPSF7-221	ENST00000543545	UPK3B	Q9BT76	320 aa		6.96	□□□□□ -1.3
CPSF7-221	ENST00000543545	CSMD3	Q7Z407	3707 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545		A0A087WX48	190 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	LCE6A	A0A183	80 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	TCAP	O15273	167 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	TSHB	P01222	138 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	IGHV3-30	P01768	117 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	IGHV3-33	P01772	117 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	IGHV3-30-3	P0DP02	117 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	IGHV3-30-5	P0DP03	117 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	RPL32	P62910	135 aa	Known RBP	6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	IQCJ	Q1A5X6	159 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545		Q8N8P6	123 aa		6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	NXT2	Q9NPJ8	142 aa	Known RBP	6.95	□□□□□ -1.3
CPSF7-221	ENST00000543545	TRAV9-2	A0A087WT02	112 aa		6.94	□□□□□ -1.3
CPSF7-221	ENST00000543545		M0R2N4	97 aa		6.94	□□□□□ -1.3
CPSF7-221	ENST00000543545	IFI27	P40305	119 aa	Predicted RBP	6.94	□□□□□ -1.3
CPSF7-221	ENST00000543545	PKIA	P61925	76 aa		6.94	□□□□□ -1.3
CPSF7-221	ENST00000543545	AMMECR1L	Q6DCA0	310 aa		6.94	□□□□□ -1.3
CPSF7-221	ENST00000543545	FA2H	Q7L5A8	372 aa		6.94	□□□□□ -1.3
CPSF7-221	ENST00000543545	ALMS1	Q8TCU4	4167 aa		6.94	□□□□□ -1.3
CPSF7-221	ENST00000543545	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.93	□□□□□ -1.3
CPSF7-221	ENST00000543545	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.93	□□□□□ -1.3
CPSF7-221	ENST00000543545	PRSS47	A8MTI9	375 aa		6.93	□□□□□ -1.3
CPSF7-221	ENST00000543545	RNASEK	Q6P5S7	137 aa	Known RBP	6.93	□□□□□ -1.3
CPSF7-221	ENST00000543545	NIT1	Q86X76	327 aa		6.93	□□□□□ -1.3
CPSF7-221	ENST00000543545	TENM2	Q9NT68	2774 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	NBDY	A0A0U1RRE5	68 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	DNAH10OS	P0CZ25	163 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	LAGE3	Q14657	143 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	TTC32	Q5I0X7	151 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	LINC01556	Q5JQF7	62 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	BAGE3	Q86Y29	109 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	C18orf32	Q8TCD1	76 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	TMEM18	Q96B42	140 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	CHCHD7	Q9BUK0	85 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	VPS13D	Q5THJ4	4388 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545	DNAH1	Q9P2D7	4330 aa		6.92	□□□□□ -1.3
CPSF7-221	ENST00000543545		H7C423	109 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	FGF6	P10767	208 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	ESD	P10768	282 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	RAB5B	P61020	215 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	RBX1	P62877	108 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	SMAGP	Q0VAQ4	97 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	ORMDL2	Q53FV1	153 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	DGAT2L7P	Q6IED9	249 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545		Q8N3U1	123 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	C10orf126	Q8N4M7	172 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545	TMEM101	Q96IK0	257 aa		6.91	□□□□□ -1.3
CPSF7-221	ENST00000543545		K7EMI3	77 aa		6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	ANG	P03950	147 aa	Known RBP	6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	BTF3	P20290	206 aa	Known RBP	6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	G0S2	P27469	103 aa		6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	MPV17L2	Q567V2	206 aa		6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545		Q8N976	141 aa		6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	C20orf203	Q8NBC4	194 aa		6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	OR5A1	Q8NGJ0	315 aa		6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	KLK12	Q9UKR0	248 aa		6.9	□□□□□ -1.3
CPSF7-221	ENST00000543545	C1orf196	B1AJZ1	125 aa		6.89	□□□□□ -1.31
CPSF7-221	ENST00000543545		K7EP13	123 aa		6.89	□□□□□ -1.31
CPSF7-221	ENST00000543545	LINC00614	P0C842	121 aa		6.89	□□□□□ -1.31
CPSF7-221	ENST00000543545	AP5S1	Q9NUS5	200 aa		6.89	□□□□□ -1.31
CPSF7-221	ENST00000543545	CYSLTR1	Q9Y271	337 aa		6.89	□□□□□ -1.31
CPSF7-221	ENST00000543545	SACS	Q9NZJ4	4579 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545	IGKV3OR2-268	A0A0C4DH90	116 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545		A0A1B0GUV1	79 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545	CRP	P02741	224 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545	RPL39	P62891	51 aa	Known RBP	6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545	C2orf66	Q6UXQ4	117 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545	LINC00269	Q8N2A0	174 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545	UBE2W	Q96B02	151 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545		Q9HAA7	133 aa		6.88	□□□□□ -1.31
CPSF7-221	ENST00000543545	IGLV4-60	A0A075B6I1	120 aa		6.87	□□□□□ -1.31
CPSF7-221	ENST00000543545	ZNF25	P17030	456 aa	Predicted RBP	6.87	□□□□□ -1.31
CPSF7-221	ENST00000543545		Q0VG73	95 aa		6.87	□□□□□ -1.31
CPSF7-221	ENST00000543545	CLPSL2	Q6UWE3	100 aa		6.87	□□□□□ -1.31
CPSF7-221	ENST00000543545	TRAV8-3	A0A0A6YYJ7	113 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	IBA57-AS1	B1ANH7	110 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	PMCHL1	Q16048	86 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	C1orf134	Q5TEV5	83 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545		Q6ZR54	194 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	MRPL52	Q86TS9	123 aa	Known RBP	6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	CHCHD1	Q96BP2	118 aa	Known RBP	6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	SCGB3A1	Q96QR1	104 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	KRTAP1-5	Q9BYS1	174 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	SPANXA1	Q9NS26	97 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	UBE2D4	Q9Y2X8	147 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	RYR2	Q92736	4967 aa		6.86	□□□□□ -1.31
CPSF7-221	ENST00000543545	LINC01546	A6NGU7	62 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	HIST1H2BK	O60814	126 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	HSBP1	O75506	76 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	HIST1H2BJ	P06899	126 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	HIST1H2BO	P23527	126 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	HIST1H2BB	P33778	126 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	HIST1H2BD	P58876	126 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	HIST1H2BC	P62807	126 aa		6.85	□□□□□ -1.31
CPSF7-221	ENST00000543545	REG3A	Q06141	175 aa		6.85	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms