RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 TRBV25-1A0A075B6N4 114 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 IGHV1-24A0A0C4DH33 117 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 D6R8Y8 96 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 PHOX2AO14813 284 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 NPYP01303 97 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 ESDP10768 282 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 SUMO2P61956 95 aaKnown RBP6.64□□□□□ -1.35
VEGFB-204ENST00000543462 ST20Q9HBF5 79 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 RPS10P5Q9NQ39 176 aa6.64□□□□□ -1.35
VEGFB-204ENST00000543462 TRAV9-2A0A087WT02 112 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 PRSS47A8MTI9 375 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 I3L3M4 83 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 PPP1R17O96001 155 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 PPBPP02775 128 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 TNP2Q05952 138 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 COTL1Q14019 142 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 KCNIP4Q6PIL6 250 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 CBLN2Q8IUK8 224 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 C20orf78Q9BR46 151 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 TMEM243Q9BU79 118 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 PRR34Q9NV39 138 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
VEGFB-204ENST00000543462 BIRC6Q9NR09 4857 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 A0A1B0GUV1 79 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 PRSS29PA6NIE9 313 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 COLCA2A8K830 154 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 PKIAP61925 76 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 RBX1P62877 108 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.62□□□□□ -1.35
VEGFB-204ENST00000543462 C20orf203Q8NBC4 194 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 CHCHD5Q9BSY4 110 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 URGCP-MRPS24S4R325 110 aa6.62□□□□□ -1.35
VEGFB-204ENST00000543462 APCSP02743 223 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 CKS2P33552 79 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 AMTP48728 403 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 GAGE6Q13070 117 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 ELOBQ15370 118 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 ENHOQ6UWT2 76 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 NFE4Q86UQ8 179 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 ORMDL3Q8N138 153 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 Q8N976 141 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 DEFB104AQ8WTQ1 72 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 GNB1LQ9BYB4 327 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 LAMTOR2Q9Y2Q5 125 aa6.61□□□□□ -1.35
VEGFB-204ENST00000543462 TMA7Q9Y2S6 64 aaKnown RBP6.61□□□□□ -1.35
VEGFB-204ENST00000543462 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 A0A087WX48 190 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 LRCOL1A6NCL2 159 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 H7C423 109 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 VCYO14598 125 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 HLA-DQA1P01909 254 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 S100PP25815 95 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 MAPKAPK5-AS1Q8N8E1 139 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 PRELID3AQ96N28 172 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
VEGFB-204ENST00000543462 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
VEGFB-204ENST00000543462 RAB5AP20339 215 aa6.59□□□□□ -1.35
VEGFB-204ENST00000543462 MRPL52Q86TS9 123 aaKnown RBP6.59□□□□□ -1.35
VEGFB-204ENST00000543462 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.58□□□□□ -1.36
VEGFB-204ENST00000543462 TRAV8-3A0A0A6YYJ7 113 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 LOC105371267A0A1B0GV96 52 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 IGKV2-29A2NJV5 120 aaPredicted RBP6.58□□□□□ -1.36
VEGFB-204ENST00000543462 MT-ND6P03923 174 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 PMCHP20382 165 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 RAB5BP61020 215 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 COX19Q49B96 90 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 Q9HAA7 133 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
VEGFB-204ENST00000543462 A0A087WTM6 91 aa6.57□□□□□ -1.36
VEGFB-204ENST00000543462 C1orf196B1AJZ1 125 aa6.57□□□□□ -1.36
VEGFB-204ENST00000543462 ANGP03950 147 aaKnown RBP6.57□□□□□ -1.36
VEGFB-204ENST00000543462 FGF6P10767 208 aa6.57□□□□□ -1.36
VEGFB-204ENST00000543462 ZNF25P17030 456 aaPredicted RBP6.57□□□□□ -1.36
VEGFB-204ENST00000543462 WFDC2Q14508 124 aa6.57□□□□□ -1.36
VEGFB-204ENST00000543462 LINC00269Q8N2A0 174 aa6.57□□□□□ -1.36
VEGFB-204ENST00000543462 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
VEGFB-204ENST00000543462 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 TMEM262E9PQX1 116 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 TCAPO15273 167 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 KRTAP10-2P60368 255 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 Q0VG73 95 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 MIAQ16674 131 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 Q8N8P6 123 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 KIR2DL4Q99706 377 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 ALKBH7Q9BT30 221 aaPredicted RBP6.56□□□□□ -1.36
VEGFB-204ENST00000543462 TIMM21Q9BVV7 248 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 UBE2D4Q9Y2X8 147 aa6.56□□□□□ -1.36
VEGFB-204ENST00000543462 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
VEGFB-204ENST00000543462 UBE2L6O14933 153 aa6.55□□□□□ -1.36
VEGFB-204ENST00000543462 REG3AQ06141 175 aa6.55□□□□□ -1.36
VEGFB-204ENST00000543462 CLPSL2Q6UWE3 100 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms