RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 SNRPD3P62318 126 aaKnown RBP17.4■□□□□ 0.38
SHD-201ENST00000543264 PYGO1Q9Y3Y4 419 aa17.4■□□□□ 0.38
SHD-201ENST00000543264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHD-201ENST00000543264 A6NDX4 124 aa17.39■□□□□ 0.38
SHD-201ENST00000543264 HIVEP3Q5T1R4 2406 aa17.39■□□□□ 0.37
SHD-201ENST00000543264 TMEM95Q3KNT9 176 aa17.39■□□□□ 0.37
SHD-201ENST00000543264 VSIG2Q96IQ7 327 aa17.39■□□□□ 0.37
SHD-201ENST00000543264 DAND5Q8N907 189 aa17.38■□□□□ 0.37
SHD-201ENST00000543264 IGF2RP11717 2491 aa17.38■□□□□ 0.37
SHD-201ENST00000543264 KLRB1Q12918 225 aa17.37■□□□□ 0.37
SHD-201ENST00000543264 LST1O00453 97 aa17.37■□□□□ 0.37
SHD-201ENST00000543264 Q9UF83 564 aa17.37■□□□□ 0.37
SHD-201ENST00000543264 TMEM61Q8N0U2 210 aa17.36■□□□□ 0.37
SHD-201ENST00000543264 TNFRSF18Q9Y5U5 241 aa17.36■□□□□ 0.37
SHD-201ENST00000543264 KNCNA6PVL3 124 aa17.35■□□□□ 0.37
SHD-201ENST00000543264 K7EQG2 157 aa17.34■□□□□ 0.37
SHD-201ENST00000543264 TRGV11A0A075B6L2 103 aa17.34■□□□□ 0.37
SHD-201ENST00000543264 TINCRA0A1B0GVN0 87 aa17.34■□□□□ 0.37
SHD-201ENST00000543264 SMIM20Q8N5G0 67 aa17.34■□□□□ 0.37
SHD-201ENST00000543264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.33■□□□□ 0.36
SHD-201ENST00000543264 IGHV4-61A0A0C4DH41 118 aa17.33■□□□□ 0.36
SHD-201ENST00000543264 IGKV2-29A2NJV5 120 aaPredicted RBP17.33■□□□□ 0.36
SHD-201ENST00000543264 CHCHD5Q9BSY4 110 aa17.33■□□□□ 0.36
SHD-201ENST00000543264 MEIG1Q5JSS6 88 aa17.33■□□□□ 0.36
SHD-201ENST00000543264 C10orf99Q6UWK7 81 aa17.33■□□□□ 0.36
SHD-201ENST00000543264 YAE1D1Q9NRH1 226 aa17.33■□□□□ 0.36
SHD-201ENST00000543264 PRM2P04554 102 aa17.32■□□□□ 0.36
SHD-201ENST00000543264 MRPL23Q16540 153 aaKnown RBP17.32■□□□□ 0.36
SHD-201ENST00000543264 CFHR3Q02985 330 aa17.32■□□□□ 0.36
SHD-201ENST00000543264 CREBBPQ92793 2442 aa17.31■□□□□ 0.36
SHD-201ENST00000543264 RBMY1A1P0DJD3 496 aaKnown RBP17.31■□□□□ 0.36
SHD-201ENST00000543264 RBMY1CP0DJD4 496 aa17.31■□□□□ 0.36
SHD-201ENST00000543264 RBMY1FQ15415 496 aaKnown RBP17.31■□□□□ 0.36
SHD-201ENST00000543264 CRYBG3Q68DQ2 2970 aa17.3■□□□□ 0.36
SHD-201ENST00000543264 UBE2D4Q9Y2X8 147 aa17.3■□□□□ 0.36
SHD-201ENST00000543264 FAM240AA0A1B0GVK7 77 aa17.3■□□□□ 0.36
SHD-201ENST00000543264 DEFB121Q5J5C9 76 aa17.3■□□□□ 0.36
SHD-201ENST00000543264 CSPG4Q6UVK1 2322 aa17.29■□□□□ 0.36
SHD-201ENST00000543264 DUX5Q96PT3 197 aa17.29■□□□□ 0.36
SHD-201ENST00000543264 CHCHD7Q9BUK0 85 aa17.29■□□□□ 0.36
SHD-201ENST00000543264 Q6ZSN1 163 aa17.29■□□□□ 0.36
SHD-201ENST00000543264 CDKN2A-AS1Q9UH64 79 aa17.28■□□□□ 0.36
SHD-201ENST00000543264 IGHV3-38A0A0C4DH36 116 aa17.28■□□□□ 0.36
SHD-201ENST00000543264 SYNJ2BPP57105 145 aa17.28■□□□□ 0.36
SHD-201ENST00000543264 CITED2Q99967 270 aaPredicted RBP17.27■□□□□ 0.36
SHD-201ENST00000543264 A0A0U1RRA0 63 aa17.27■□□□□ 0.35
SHD-201ENST00000543264 PSMB8P28062 276 aa17.27■□□□□ 0.35
SHD-201ENST00000543264 LINC00467Q9BRT7 94 aa17.27■□□□□ 0.35
SHD-201ENST00000543264 SPANXA1Q9NS26 97 aa17.27■□□□□ 0.35
SHD-201ENST00000543264 HERV-K104P63124 156 aa17.26■□□□□ 0.35
SHD-201ENST00000543264 C3orf56Q8N813 242 aa17.26■□□□□ 0.35
SHD-201ENST00000543264 ZNF625Q96I27 306 aaPredicted RBP17.25■□□□□ 0.35
SHD-201ENST00000543264 EDA2RQ9HAV5 297 aa17.25■□□□□ 0.35
SHD-201ENST00000543264 NACAE9PAV3 2078 aa17.24■□□□□ 0.35
SHD-201ENST00000543264 TIMM17BO60830 172 aa17.24■□□□□ 0.35
SHD-201ENST00000543264 TMEM101Q96IK0 257 aa17.24■□□□□ 0.35
SHD-201ENST00000543264 C19orf84I3L1E1 186 aa17.23■□□□□ 0.35
SHD-201ENST00000543264 PIMREGQ9BSJ6 248 aa17.23■□□□□ 0.35
SHD-201ENST00000543264 CIRBPQ14011 172 aaKnown RBP17.23■□□□□ 0.35
SHD-201ENST00000543264 FAM110AQ9BQ89 295 aa17.23■□□□□ 0.35
SHD-201ENST00000543264 TRBV7-7A0A0K0K1E9 115 aa17.22■□□□□ 0.35
SHD-201ENST00000543264 SPG11Q96JI7 2443 aa17.22■□□□□ 0.35
SHD-201ENST00000543264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.22■□□□□ 0.35
SHD-201ENST00000543264 NDUFA1O15239 70 aa17.21■□□□□ 0.35
SHD-201ENST00000543264 LINC00308Q8TCZ7 52 aa17.21■□□□□ 0.35
SHD-201ENST00000543264 SHISA2Q6UWI4 295 aa17.2■□□□□ 0.34
SHD-201ENST00000543264 COX6A2Q02221 97 aa17.2■□□□□ 0.34
SHD-201ENST00000543264 Q9H8V8 135 aa17.2■□□□□ 0.34
SHD-201ENST00000543264 FAM236AA0A1B0GUQ0 79 aa17.19■□□□□ 0.34
SHD-201ENST00000543264 FAM236BA0A1B0GV22 79 aa17.19■□□□□ 0.34
SHD-201ENST00000543264 DGAT2L7PQ6IED9 249 aa17.19■□□□□ 0.34
SHD-201ENST00000543264 CHD8Q9HCK8 2581 aa17.18■□□□□ 0.34
SHD-201ENST00000543264 AVPP01185 164 aa17.18■□□□□ 0.34
SHD-201ENST00000543264 COX7A2LO14548 114 aa17.17■□□□□ 0.34
SHD-201ENST00000543264 DEFB131AP59861 70 aa17.17■□□□□ 0.34
SHD-201ENST00000543264 RNF152Q8N8N0 203 aa17.17■□□□□ 0.34
SHD-201ENST00000543264 Q8N2B8 174 aa17.16■□□□□ 0.34
SHD-201ENST00000543264 IGHV4-59P01825 116 aa17.16■□□□□ 0.34
SHD-201ENST00000543264 TIRAPP58753 221 aa17.16■□□□□ 0.34
SHD-201ENST00000543264 C10orf105Q8TEF2 133 aa17.15■□□□□ 0.34
SHD-201ENST00000543264 ACYP1P07311 99 aa17.15■□□□□ 0.34
SHD-201ENST00000543264 SMCR5Q8TEV8 140 aa17.15■□□□□ 0.34
SHD-201ENST00000543264 NCOR2Q9Y618 2525 aa17.14■□□□□ 0.34
SHD-201ENST00000543264 IGHV4-30-2A0A087WSY4 118 aa17.14■□□□□ 0.33
SHD-201ENST00000543264 MSMBP08118 114 aa17.14■□□□□ 0.33
SHD-201ENST00000543264 LINC01587Q99440 93 aa17.13■□□□□ 0.33
SHD-201ENST00000543264 IGLV5-45A0A087WSX0 123 aa17.13■□□□□ 0.33
SHD-201ENST00000543264 HOXD3P31249 432 aaPredicted RBP17.13■□□□□ 0.33
SHD-201ENST00000543264 ZNF415Q09FC8 603 aa17.13■□□□□ 0.33
SHD-201ENST00000543264 SOSTDC1Q6X4U4 206 aa17.13■□□□□ 0.33
SHD-201ENST00000543264 CELSR2Q9HCU4 2923 aa17.12■□□□□ 0.33
SHD-201ENST00000543264 DAZ2Q13117 558 aaKnown RBP17.12■□□□□ 0.33
SHD-201ENST00000543264 DAZ4Q86SG3 579 aaKnown RBP17.12■□□□□ 0.33
SHD-201ENST00000543264 DAZ3Q9NR90 486 aaKnown RBP17.12■□□□□ 0.33
SHD-201ENST00000543264 IGHV3OR16-12A0A075B7B8 117 aa17.12■□□□□ 0.33
SHD-201ENST00000543264 RBMY1BA6NDE4 496 aaKnown RBP17.12■□□□□ 0.33
SHD-201ENST00000543264 RBMY1EA6NEQ0 496 aaKnown RBP17.12■□□□□ 0.33
SHD-201ENST00000543264 RBMY1DP0C7P1 496 aaKnown RBP17.12■□□□□ 0.33
SHD-201ENST00000543264 NDUFA7O95182 113 aa17.1■□□□□ 0.33
SHD-201ENST00000543264 IGHV3-53P01767 116 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms