RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
ZEB1-209ENST00000542879 CHCHD5Q9BSY4 110 aa4.12□□□□□ -1.75
ZEB1-209ENST00000542879 GAGE2DQ9UEU5 116 aa4.12□□□□□ -1.75
ZEB1-209ENST00000542879 IGHV3-64A0A075B6Q5 118 aa4.11□□□□□ -1.75
ZEB1-209ENST00000542879 PSMB8P28062 276 aa4.11□□□□□ -1.75
ZEB1-209ENST00000542879 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
ZEB1-209ENST00000542879 DEFB121Q5J5C9 76 aa4.11□□□□□ -1.75
ZEB1-209ENST00000542879 DNAH1Q9P2D7 4330 aa4.11□□□□□ -1.75
ZEB1-209ENST00000542879 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 IGHV4-61A0A0C4DH41 118 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 TEX49A0A1B0GTD5 131 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 RBMY1A1P0DJD3 496 aaKnown RBP4.1□□□□□ -1.75
ZEB1-209ENST00000542879 RBMY1CP0DJD4 496 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 RBMY1FQ15415 496 aaKnown RBP4.1□□□□□ -1.75
ZEB1-209ENST00000542879 ICOSQ9Y6W8 199 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 NBASA2RRP1 2371 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 H7C423 109 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 C19orf84I3L1E1 186 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 IFITM1P13164 125 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 MIAQ16674 131 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 TIMM21Q9BVV7 248 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 SPTAN1Q13813 2472 aaKnown RBP4.1□□□□□ -1.75
ZEB1-209ENST00000542879 COL12A1Q99715 3063 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 MUC6Q6W4X9 2439 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 TRAV8-3A0A0A6YYJ7 113 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 TINCRA0A1B0GVN0 87 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 SMIM9A6NGZ8 99 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 A8MTW9 85 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 H7C2G1 150 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 SPINK13Q1W4C9 94 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 CHCHD7Q9BUK0 85 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 ATRXP46100 2492 aa4.1□□□□□ -1.75
ZEB1-209ENST00000542879 SPTA1P02549 2419 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 ADARB2-AS1A8MUL3 147 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 H3BT86 120 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 FAM19A5Q7Z5A7 132 aaPredicted RBP4.09□□□□□ -1.75
ZEB1-209ENST00000542879 VSIG2Q96IQ7 327 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 C2orf48Q96LS8 159 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 CELSR2Q9HCU4 2923 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 H3BMM0 161 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 TIMM17BO60830 172 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 AVPP01185 164 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 CD28P10747 220 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 C10orf105Q8TEF2 133 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 UBE2WQ96B02 151 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 UBE2D4Q9Y2X8 147 aa4.09□□□□□ -1.75
ZEB1-209ENST00000542879 AKAP6Q13023 2319 aa4.09□□□□□ -1.76
ZEB1-209ENST00000542879 TRGV11A0A075B6L2 103 aa4.09□□□□□ -1.76
ZEB1-209ENST00000542879 TRAV8-4A0A0B4J246 113 aa4.09□□□□□ -1.76
ZEB1-209ENST00000542879 LST1O00453 97 aa4.09□□□□□ -1.76
ZEB1-209ENST00000542879 PROK1P58294 105 aa4.09□□□□□ -1.76
ZEB1-209ENST00000542879 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.76
ZEB1-209ENST00000542879 CEMP1Q6PRD7 247 aaPredicted RBP4.09□□□□□ -1.76
ZEB1-209ENST00000542879 TMEM61Q8N0U2 210 aa4.09□□□□□ -1.76
ZEB1-209ENST00000542879 FAM240AA0A1B0GVK7 77 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 TMEM89A2RUT3 159 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 SNCGO76070 127 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 IGKV3-20P01619 116 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 HIST1H4AP62805 103 aaKnown RBP4.08□□□□□ -1.76
ZEB1-209ENST00000542879 Q1RN00 199 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 C10orf99Q6UWK7 81 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 Q6ZSV7 163 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 Q9UF83 564 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 IGLV5-45A0A087WSX0 123 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 PIK3CD-AS1Q5SR53 167 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 PIMREGQ9BSJ6 248 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 C22orf24Q9Y442 160 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 A8MZ25 164 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 Q6ZSN1 163 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 SPANXA1Q9NS26 97 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 SORL1Q92673 2214 aa4.08□□□□□ -1.76
ZEB1-209ENST00000542879 C2orf82Q6UX34 121 aa4.07□□□□□ -1.76
ZEB1-209ENST00000542879 CLEC2BQ92478 149 aa4.07□□□□□ -1.76
ZEB1-209ENST00000542879 CITED2Q99967 270 aaPredicted RBP4.07□□□□□ -1.76
ZEB1-209ENST00000542879 BEX4Q9NWD9 120 aaPredicted RBP4.07□□□□□ -1.76
ZEB1-209ENST00000542879 CSMD2Q7Z408 3487 aa4.07□□□□□ -1.76
ZEB1-209ENST00000542879 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.07□□□□□ -1.768e-10■■■■□ 20.2
ZEB1-209ENST00000542879 NDUFA1O15239 70 aa4.07□□□□□ -1.76
ZEB1-209ENST00000542879 RNASE13Q5GAN3 156 aaKnown RBP4.07□□□□□ -1.76
ZEB1-209ENST00000542879 C16orf95Q9H693 158 aa4.07□□□□□ -1.76
ZEB1-209ENST00000542879 RBMY1BA6NDE4 496 aaKnown RBP4.07□□□□□ -1.76
ZEB1-209ENST00000542879 RBMY1EA6NEQ0 496 aaKnown RBP4.07□□□□□ -1.76
ZEB1-209ENST00000542879 RBMY1DP0C7P1 496 aaKnown RBP4.07□□□□□ -1.76
ZEB1-209ENST00000542879 IGF2RP11717 2491 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 DNAH3Q8TD57 4116 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 UBR5O95071 2799 aaPredicted RBP4.06□□□□□ -1.76
ZEB1-209ENST00000542879 IGHV4-30-2A0A087WSY4 118 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 TRBV7-7A0A0K0K1E9 115 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 MSMBP08118 114 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 TIRAPP58753 221 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 FAM19A3Q7Z5A8 133 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.06□□□□□ -1.76
ZEB1-209ENST00000542879 LINC00467Q9BRT7 94 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 LYSTQ99698 3801 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 IGHV3-73A0A0B4J1V6 119 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 C4orf26Q17RF5 130 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
ZEB1-209ENST00000542879 PRSS2P07478 247 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms