RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LRP4O75096 1905 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 ACANP16112 2415 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 FLNAP21333 2647 aaKnown RBP2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 TDRD6O60522 2096 aaKnown RBP2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 TRBV20-1A0A075B6N2 111 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 CTXND1A0A1B0GTU2 59 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 UBE2L5PA0A1B0GUS4 154 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 MDFIC2A0A1B0GVS7 189 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 A8MWP4 228 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 H0YGG7 62 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 IGLV7-43P04211 117 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 ZNF32P17041 273 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 INSL3P51460 131 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 RBM11P57052 281 aaKnown RBP2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 ZNF90Q03938 601 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 TFF3Q07654 80 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 KISS1Q15726 138 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 GDF5OSQ5U4N7 250 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 ADM2Q7Z4H4 148 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 SBSPONQ8IVN8 264 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 C3orf22Q8N5N4 141 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 Q8N9L7 120 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 H1FXQ92522 213 aaKnown RBP2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 CHCHD1Q96BP2 118 aaKnown RBP2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 RPUSD1Q9UJJ7 312 aaKnown RBP2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 TIMM9Q9Y5J7 89 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 ICOSQ9Y6W8 199 aa2.42□□□□□ -2.02
SFSWAP-211ENST00000542813 MXRA5Q9NR99 2828 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 SVILO95425 2214 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 TRAV5A0A0B4J249 113 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 A0A1B0GVY2 172 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 H3BMM0 161 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 UQCRQO14949 82 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 NCR2O95944 276 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 PPYP01298 95 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 IGKV1-5P01602 117 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 CD7P09564 240 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 TAS2R45P59539 299 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 FGF12P61328 243 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 SLC38A11Q08AI6 406 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 PIGYQ3MUY2 71 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 LINC01545Q5VT33 79 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 CFAP126Q5VTH2 177 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 Q5XG85 94 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 Q6P435 159 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 ZNF818PQ6ZRF7 136 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 SSX8Q7RTT4 187 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 TEN1Q86WV5 123 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 KLF14Q8TD94 323 aaPredicted RBP2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 RAB37Q96AX2 223 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 UBE2WQ96B02 151 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 LINC00526Q96FQ7 95 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 LINC00477Q96M19 166 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 PSENENQ9NZ42 101 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 S4R3C0 116 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 V9GYV3 84 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 SHANK1Q9Y566 2161 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 DYSFO75923 2080 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 TLN2Q9Y4G6 2542 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 MEGF8Q7Z7M0 2845 aa2.41□□□□□ -2.02
SFSWAP-211ENST00000542813 KIAA1549Q9HCM3 1950 aa2.4□□□□□ -2.02
SFSWAP-211ENST00000542813 TRAV4A0A0B4J268 109 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 PIGBOS1A0A0B4J2F0 54 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 TRBV7-7A0A0K0K1E9 115 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 KNCNA6PVL3 124 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 A8MUU9 505 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 SYNGR2O43760 224 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 SPINK4O60575 86 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 PGLYRP1O75594 196 aaPredicted RBP2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 RBP4P02753 201 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 CRYGAP11844 174 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 COX6B1P14854 86 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 KRTAP10-3P60369 221 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 TMEM258P61165 79 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 RRN3P1Q2M238 152 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 DEFB110Q30KQ9 67 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 C9orf153Q5TBE3 101 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 TMEM14EPQ6UXP3 125 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 C16orf47Q6ZP98 133 aaPredicted RBP2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 GOLT1AQ6ZVE7 132 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 C10orf126Q8N4M7 172 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 NUP35Q8NFH5 326 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 PLEKHB2Q96CS7 222 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 DPH3Q96FX2 82 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 CARD19Q96LW7 228 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 LINC01600Q96MT4 127 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 CCL13Q99616 98 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 IMUPQ9GZP8 106 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 HILPDAQ9Y5L2 63 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 U3KQA8 63 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 MED13Q9UHV7 2174 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 DOCK11Q5JSL3 2073 aa2.4□□□□□ -2.03
SFSWAP-211ENST00000542813 MAP1AP78559 2803 aaPredicted RBP2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 IGKV1OR2-108A0A075B7D4 117 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 IGHV1-24A0A0C4DH33 117 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 FAM236DA0A1B0GTK5 79 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 C16orf90A8MZG2 172 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 C9JCJ5 164 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms