RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 RUSC1-AS1Q66K80 236 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 C17orf82Q86X59 251 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-219ENST00000542112 TMEM254Q8TBM7 123 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 LIMD2Q9BT23 127 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 FGF23Q9GZV9 251 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-219ENST00000542112 GPR179Q6PRD1 2367 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 OTOGLQ3ZCN5 2332 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 CNTRLQ7Z7A1 2325 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 EYSQ5T1H1 3165 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 hDV103S1A0JD37 113 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 SAA1P0DJI8 122 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-219ENST00000542112 GNLYP22749 145 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 S100A4P26447 101 aaKnown RBP3.12□□□□□ -1.91
SNHG1-219ENST00000542112 ADAMTSL4-AS1Q5T5F5 129 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 Q8N6K4 173 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 CCL4L1Q8NHW4 92 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 Q9H8V8 135 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 LINC00574Q9H8X3 128 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 C22orf24Q9Y442 160 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 DYSFO75923 2080 aa3.12□□□□□ -1.91
SNHG1-219ENST00000542112 MYO7BQ6PIF6 2116 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 A8MUN3 132 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 C19orf84I3L1E1 186 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 NDUFA1O15239 70 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 PATE4P0C8F1 98 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 IGHV3-30-3P0DP02 117 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 Q6ZTC4 211 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 LINC00269Q8N2A0 174 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 CCL17Q92583 94 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 RMI2Q96E14 147 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 CXXC4Q9H2H0 198 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 NDUFA12Q9UI09 145 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 CNOT1A5YKK6 2376 aaKnown RBP3.11□□□□□ -1.91
SNHG1-219ENST00000542112 SDK2Q58EX2 2172 aa3.11□□□□□ -1.91
SNHG1-219ENST00000542112 AHCTF1Q8WYP5 2266 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 IGLV5-39A0A0G2JS06 123 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 SPTY2D1-AS1A0A0U1RR47 76 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 A6NN06 94 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 SPRY3O43610 288 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 NDUFB1O75438 58 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 TSHBP01222 138 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 POLR2KP53803 58 aaKnown RBP3.1□□□□□ -1.91
SNHG1-219ENST00000542112 ELOF1P60002 83 aaKnown RBP3.1□□□□□ -1.91
SNHG1-219ENST00000542112 SYCNQ0VAF6 134 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 C15orf32Q32M92 178 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 ENHOQ6UWT2 76 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 CLEC19AQ6UXS0 136 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 DEFB123Q8N688 67 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 PATE1Q8WXA2 126 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 BPESC1Q9GZL8 116 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 ORMDL1Q9P0S3 153 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 MED12Q93074 2177 aa3.1□□□□□ -1.91
SNHG1-219ENST00000542112 XIRP2A4UGR9 3374 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 IGKV3D-15A0A087WSY6 115 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 LOC110117498A0A087WWA1 95 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 TRBV6-8A0A0A6YYG3 113 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 TRAV22A0A0B4J277 110 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 IGHV7-4-1A0A0J9YVY3 117 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 IGHV3-9P01782 118 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 TRGV3P03979 118 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 SAA2P0DJI9 122 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-219ENST00000542112 CGB3P0DN86 165 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 CGB7P0DN87 165 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 LYZP61626 148 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 RPL39P5Q59GN2 51 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 LINC00308Q8TCZ7 52 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 RPL36ALQ969Q0 106 aaKnown RBP3.09□□□□□ -1.91
SNHG1-219ENST00000542112 C14orf132Q9NPU4 83 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 C11orf21Q9P2W6 132 aa3.09□□□□□ -1.91
SNHG1-219ENST00000542112 DNAJC13O75165 2243 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 RTTNQ86VV8 2226 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 FAM186AA6NE01 2351 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 A0A087WZ39 114 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 LY6G6EA0A0G2JKS1 128 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 GNRH2O43555 120 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 GAS8-AS1O95177 125 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 LHBP01229 141 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 CTSGP08311 255 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 MP68P56378 58 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 WT1-ASQ06250 92 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 NREPQ16612 68 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 DEFB114Q30KQ6 69 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 SOSTDC1Q6X4U4 206 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 Q6ZRP5 223 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 Q6ZSV7 163 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 RNF5Q99942 180 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 KIF25-AS1Q9Y6Z4 181 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 U3KQA8 63 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 USF3Q68DE3 2245 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 COL6A3P12111 3177 aa3.08□□□□□ -1.92
SNHG1-219ENST00000542112 EP300Q09472 2414 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-219ENST00000542112 RIF1Q5UIP0 2472 aaKnown RBP3.08□□□□□ -1.92
SNHG1-219ENST00000542112 DNAH14Q0VDD8 3507 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 TRAV12-3A0A0B4J271 114 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 IGKV3D-20A0A0C4DH25 116 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 A0A1B0GW54 56 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms