RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 TRAV13-1A0A0B4J241 112 aa11.01□□□□□ -0.65
VARS2-211ENST00000541562 G3V4G9 280 aa11.01□□□□□ -0.65
VARS2-211ENST00000541562 DGAT2L7PQ6IED9 249 aa11.01□□□□□ -0.65
VARS2-211ENST00000541562 A4D1N5 150 aa11.01□□□□□ -0.65
VARS2-211ENST00000541562 TSPAN13O95857 204 aa11□□□□□ -0.65
VARS2-211ENST00000541562 HIGD1BQ9P298 99 aa11□□□□□ -0.65
VARS2-211ENST00000541562 A0A0J9YY99 117 aa11□□□□□ -0.65
VARS2-211ENST00000541562 OR5A1Q8NGJ0 315 aa11□□□□□ -0.65
VARS2-211ENST00000541562 MUSTN1Q8IVN3 82 aa10.99□□□□□ -0.65
VARS2-211ENST00000541562 CR1P17927 2039 aa10.99□□□□□ -0.65
VARS2-211ENST00000541562 TRAV12-1A0A0B4J245 112 aa10.98□□□□□ -0.65
VARS2-211ENST00000541562 A0A096LPF7 62 aa10.98□□□□□ -0.65
VARS2-211ENST00000541562 GAGE12JA6NER3 117 aa10.98□□□□□ -0.65
VARS2-211ENST00000541562 LINC01546A6NGU7 62 aa10.98□□□□□ -0.65
VARS2-211ENST00000541562 H3BMM0 161 aa10.98□□□□□ -0.65
VARS2-211ENST00000541562 GAGE4Q13068 117 aa10.98□□□□□ -0.65
VARS2-211ENST00000541562 GAGE5Q13069 117 aa10.98□□□□□ -0.65
VARS2-211ENST00000541562 H3BUA1 57 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 I3L3M4 83 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 Q6ZUT4 128 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 C11orf68Q9H3H3 251 aaKnown RBP10.97□□□□□ -0.65
VARS2-211ENST00000541562 IGLV4-3A0A075B6K6 122 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 A0A1B0GV72 72 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 K7EMT4 169 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 EIF4EBP3O60516 100 aaPredicted RBP10.97□□□□□ -0.65
VARS2-211ENST00000541562 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 CFC1P0CG37 223 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 Q6YL49 198 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 ZNF843Q8N446 348 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 LINC00467Q9BRT7 94 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 LINC01619G3V211 115 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 ELANEP08246 267 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 C9orf85Q96MD7 179 aa10.97□□□□□ -0.65
VARS2-211ENST00000541562 C20orf203Q8NBC4 194 aa10.96□□□□□ -0.65
VARS2-211ENST00000541562 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.65
VARS2-211ENST00000541562 TCL1BO95988 128 aa10.96□□□□□ -0.65
VARS2-211ENST00000541562 CITED2Q99967 270 aaPredicted RBP10.96□□□□□ -0.65
VARS2-211ENST00000541562 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.65
VARS2-211ENST00000541562 ESM1Q9NQ30 184 aa10.96□□□□□ -0.65
VARS2-211ENST00000541562 ZNF22P17026 224 aaPredicted RBP10.96□□□□□ -0.66
VARS2-211ENST00000541562 Q6ZTI0 123 aa10.95□□□□□ -0.66
VARS2-211ENST00000541562 STHQ8IWL8 128 aa10.95□□□□□ -0.66
VARS2-211ENST00000541562 YAE1D1Q9NRH1 226 aa10.95□□□□□ -0.66
VARS2-211ENST00000541562 SPANXB1Q9NS25 103 aaPredicted RBP10.95□□□□□ -0.66
VARS2-211ENST00000541562 C9JAW5 83 aa10.95□□□□□ -0.66
VARS2-211ENST00000541562 NOP10Q9NPE3 64 aaKnown RBP10.95□□□□□ -0.66
VARS2-211ENST00000541562 TRRAPQ9Y4A5 3859 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 TRBV27A0A0K0K1C4 114 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 GEMIN7Q9H840 131 aaKnown RBP10.94□□□□□ -0.66
VARS2-211ENST00000541562 GAGE7O76087 117 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 GAGE12FP0CL80 117 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 GAGE12GP0CL81 117 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 GAGE12IP0CL82 117 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 DEFB113Q30KQ7 82 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 NDUFA11Q86Y39 141 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 TOMM7Q9P0U1 55 aa10.94□□□□□ -0.66
VARS2-211ENST00000541562 LGALS9O00182 355 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 DEFB4AO15263 64 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 C10orf126Q8N4M7 172 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 ATP6V0BQ99437 205 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 PPP1R17O96001 155 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 IGHV3-30-3P0DP02 117 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 ADAMTSL4-AS1Q5T5F5 129 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 TIMM21Q9BVV7 248 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 RHODO00212 210 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
VARS2-211ENST00000541562 NFE4Q86UQ8 179 aa10.93□□□□□ -0.66
VARS2-211ENST00000541562 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 LINC00694P0DN24 101 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 KLK9Q2XQG4 91 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 TRGV11A0A075B6L2 103 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 A0A096LNT2 108 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 GAGE12HA6NDE8 117 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 CDKN2A-AS1Q9UH64 79 aa10.92□□□□□ -0.66
VARS2-211ENST00000541562 TMEM238LA0A1B0GVL6 79 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 A6NJY4 79 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 CLPSL2Q6UWE3 100 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 IGHV3-30P01768 117 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 IGHV3-30-5P0DP03 117 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 DEFB130BP0DP73 79 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 DEFB130AP0DP74 79 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 TMEM141Q96I45 108 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 CFAP126Q5VTH2 177 aa10.91□□□□□ -0.66
VARS2-211ENST00000541562 TRGV2A0A075B6R0 118 aa10.9□□□□□ -0.66
VARS2-211ENST00000541562 DNAJC9-AS1A6NH13 148 aa10.9□□□□□ -0.66
VARS2-211ENST00000541562 COX6A2Q02221 97 aa10.9□□□□□ -0.66
VARS2-211ENST00000541562 DEFB114Q30KQ6 69 aa10.9□□□□□ -0.66
VARS2-211ENST00000541562 CLEC2BQ92478 149 aa10.9□□□□□ -0.66
VARS2-211ENST00000541562 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
VARS2-211ENST00000541562 ODF3L2Q3SX64 289 aa10.9□□□□□ -0.67
VARS2-211ENST00000541562 POM121L12Q8N7R1 296 aa10.9□□□□□ -0.67
VARS2-211ENST00000541562 TMEM238C9JI98 176 aa10.89□□□□□ -0.67
VARS2-211ENST00000541562 GATA3P23771 443 aa10.89□□□□□ -0.67
VARS2-211ENST00000541562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.89□□□□□ -0.67
VARS2-211ENST00000541562 NOTCH1P46531 2555 aa10.89□□□□□ -0.67
VARS2-211ENST00000541562 M0R2P5 195 aa10.88□□□□□ -0.67
VARS2-211ENST00000541562 PRO1854Q9UHT4 67 aa10.88□□□□□ -0.67
VARS2-211ENST00000541562 NBEAL1Q6ZS30 2694 aa10.88□□□□□ -0.67
VARS2-211ENST00000541562 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms