RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 TRAPPC1Q9Y5R8 145 aa3.45□□□□□ -1.86
SPARCL1-209ENST00000541496 TNFRSF18Q9Y5U5 241 aa3.45□□□□□ -1.86
SPARCL1-209ENST00000541496 DNAH9Q9NYC9 4486 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 GAGE12JA6NER3 117 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 SDHAF1A6NFY7 115 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 TNFRSF6BO95407 300 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 NCR2O95944 276 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 GAGE1Q13065 139 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 GAGE4Q13068 117 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 GAGE5Q13069 117 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 TMEM97Q5BJF2 176 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 ZFAND6Q6FIF0 208 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 ATP6V0E2Q8NHE4 81 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 RPL39LQ96EH5 51 aaKnown RBP3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 PRELID3AQ96N28 172 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 ALKBH7Q9BT30 221 aaPredicted RBP3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 UPK3BQ9BT76 320 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 TMEM70Q9BUB7 260 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 GTSF1LQ9H1H1 148 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 ST20Q9HBF5 79 aa3.44□□□□□ -1.86
SPARCL1-209ENST00000541496 IGLV2-18A0A075B6J9 118 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 TRBV6-8A0A0A6YYG3 113 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 SMKR1H3BMG3 65 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 I3L3M4 83 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 K7EMI3 77 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 VCYO14598 125 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 TCAPO15273 167 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 NUDT3O95989 172 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 NPYP01303 97 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 CCL18P55774 89 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 FABP9Q0Z7S8 132 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 IQCJQ1A5X6 159 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 KIAA1644Q3SXP7 199 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 LELP1Q5T871 98 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 LYPD5Q6UWN5 251 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 KRTAP9-8Q9BYQ0 159 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 MAP1LC3AQ9H492 121 aa3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 NXT2Q9NPJ8 142 aaKnown RBP3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 MRPS16Q9Y3D3 137 aaKnown RBP3.43□□□□□ -1.86
SPARCL1-209ENST00000541496 LINC01546A6NGU7 62 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 TSHBP01222 138 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 TRGC2P03986 189 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 PMCHP20382 165 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 GCSHP23434 173 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 COTL1Q14019 142 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 ESRGQ1W209 222 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 LGALS9CQ6DKI2 356 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 NTM-AS1Q6ZSK4 140 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 KIR2DL4Q99706 377 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 LINC00588Q9Y4M8 146 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 MUC4Q99102 2169 aa3.42□□□□□ -1.86
SPARCL1-209ENST00000541496 TRBV25-1A0A075B6N4 114 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 TRAV8-6A0A0B4J262 113 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 IGHV1-24A0A0C4DH33 117 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 IGHV3-38A0A0C4DH36 116 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 H7C423 109 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 K7EP13 123 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 ESDP10768 282 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 PKIAP61925 76 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 Q0VG73 95 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 Q8N8P6 123 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 C18orf32Q8TCD1 76 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 TMEM243Q9BU79 118 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 CHCHD7Q9BUK0 85 aa3.41□□□□□ -1.86
SPARCL1-209ENST00000541496 A0A1B0GUV1 79 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 LINC01549A6NIU2 74 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 DNAH10OSP0CZ25 163 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 G0S2P27469 103 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 FCER1GP30273 86 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 IFI27P40305 119 aaPredicted RBP3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 AMTP48728 403 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 RAB5BP61020 215 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 ORMDL2Q53FV1 153 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 LINC01556Q5JQF7 62 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 MRPL52Q86TS9 123 aaKnown RBP3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 NIT1Q86X76 327 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 PRSS3P2Q8NHM4 247 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 LINC00476Q8WZB0 136 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 TIMM21Q9BVV7 248 aa3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 CSDC2Q9Y534 153 aaKnown RBP3.4□□□□□ -1.87
SPARCL1-209ENST00000541496 LOC389332A0A1B0GUA5 103 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 C1orf196B1AJZ1 125 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 SIVA1O15304 175 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BKO60814 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BJP06899 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 NPSP0C0P6 89 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 LINC00614P0C842 121 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 ZNF25P17030 456 aaPredicted RBP3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 BTF3P20290 206 aaKnown RBP3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BOP23527 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BBP33778 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BDP58876 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BCP62807 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 SMAGPQ0VAQ4 97 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 LAGE3Q14657 143 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST2H2BEQ16778 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms