RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
SPOCK3-226ENST00000541354 HERVK_113P61574 105 aa10.63□□□□□ -0.71
SPOCK3-226ENST00000541354 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
SPOCK3-226ENST00000541354 ZNF56Q15929 161 aa10.63□□□□□ -0.71
SPOCK3-226ENST00000541354 NAA38Q9BRA0 125 aaKnown RBP10.62□□□□□ -0.71
SPOCK3-226ENST00000541354 HECTD1Q9ULT8 2610 aa10.62□□□□□ -0.71
SPOCK3-226ENST00000541354 FAM74A4Q5TZK3 123 aa10.62□□□□□ -0.71
SPOCK3-226ENST00000541354 C1orf158Q8N1D5 194 aa10.62□□□□□ -0.71
SPOCK3-226ENST00000541354 C20orf203Q8NBC4 194 aa10.62□□□□□ -0.71
SPOCK3-226ENST00000541354 TMEM263Q8WUH6 116 aaKnown RBP10.62□□□□□ -0.71
SPOCK3-226ENST00000541354 K7ERJ3 54 aa10.61□□□□□ -0.71
SPOCK3-226ENST00000541354 HIST2H2BDQ6DRA6 164 aa10.61□□□□□ -0.71
SPOCK3-226ENST00000541354 RS1O15537 224 aa10.61□□□□□ -0.71
SPOCK3-226ENST00000541354 CRYBA4P53673 196 aa10.61□□□□□ -0.71
SPOCK3-226ENST00000541354 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
SPOCK3-226ENST00000541354 PYGO1Q9Y3Y4 419 aa10.61□□□□□ -0.71
SPOCK3-226ENST00000541354 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
SPOCK3-226ENST00000541354 SPANXB1Q9NS25 103 aaPredicted RBP10.6□□□□□ -0.71
SPOCK3-226ENST00000541354 DAZ2Q13117 558 aaKnown RBP10.6□□□□□ -0.71
SPOCK3-226ENST00000541354 ZNRF2Q8NHG8 242 aa10.6□□□□□ -0.71
SPOCK3-226ENST00000541354 C16orf74Q96GX8 76 aa10.6□□□□□ -0.71
SPOCK3-226ENST00000541354 RRN3P1Q2M238 152 aa10.59□□□□□ -0.71
SPOCK3-226ENST00000541354 UBE2D1P51668 147 aa10.59□□□□□ -0.71
SPOCK3-226ENST00000541354 CSNK1G2-AS1Q8NCQ2 148 aa10.59□□□□□ -0.71
SPOCK3-226ENST00000541354 AGRNO00468 2067 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 ZNF479Q96JC4 524 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 AMELXQ99217 191 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 A0A0J9YY99 117 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 TMEM238LA0A1B0GVL6 79 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 A6NJY4 79 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 GIG44P09565 113 aaPredicted RBP10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 KIR2DL5BQ8NHK3 375 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 PLEKHB2Q96CS7 222 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 XCL2Q9UBD3 114 aa10.58□□□□□ -0.72
SPOCK3-226ENST00000541354 SMIM9A6NGZ8 99 aa10.57□□□□□ -0.72
SPOCK3-226ENST00000541354 OVOL2Q9BRP0 275 aa10.57□□□□□ -0.72
SPOCK3-226ENST00000541354 TMEM223A0PJW6 202 aa10.56□□□□□ -0.72
SPOCK3-226ENST00000541354 G3V4G9 280 aa10.56□□□□□ -0.72
SPOCK3-226ENST00000541354 SLC25A29Q8N8R3 303 aa10.56□□□□□ -0.72
SPOCK3-226ENST00000541354 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
SPOCK3-226ENST00000541354 IGLV4-3A0A075B6K6 122 aa10.55□□□□□ -0.72
SPOCK3-226ENST00000541354 F8W1H4 67 aa10.55□□□□□ -0.72
SPOCK3-226ENST00000541354 LEPROTO15243 131 aa10.55□□□□□ -0.72
SPOCK3-226ENST00000541354 IGHV3-53P01767 116 aa10.55□□□□□ -0.72
SPOCK3-226ENST00000541354 NSD1Q96L73 2696 aaPredicted RBP10.55□□□□□ -0.72
SPOCK3-226ENST00000541354 SCGB1D4Q6XE38 83 aa10.55□□□□□ -0.72
SPOCK3-226ENST00000541354 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
SPOCK3-226ENST00000541354 FAM104AQ969W3 186 aa10.54□□□□□ -0.72
SPOCK3-226ENST00000541354 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
SPOCK3-226ENST00000541354 J3QQQ9 107 aa10.54□□□□□ -0.72
SPOCK3-226ENST00000541354 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
SPOCK3-226ENST00000541354 FN1P02751 2386 aaKnown RBP10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 TRBV10-1A0A0K0K1A3 114 aa10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 RNF151Q2KHN1 245 aa10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 EMP1P54849 157 aa10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 VCX2Q9H322 139 aa10.53□□□□□ -0.72
SPOCK3-226ENST00000541354 PCP4P48539 62 aa10.52□□□□□ -0.73
SPOCK3-226ENST00000541354 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.73
SPOCK3-226ENST00000541354 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.73
SPOCK3-226ENST00000541354 OPRPNQ99935 248 aaPredicted RBP10.52□□□□□ -0.73
SPOCK3-226ENST00000541354 APOC4P55056 127 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 DEFB104AQ8WTQ1 72 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 TNFRSF18Q9Y5U5 241 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 AZU1P20160 251 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 VPS25Q9BRG1 176 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 MTORP42345 2549 aa10.51□□□□□ -0.73
SPOCK3-226ENST00000541354 LGALS3P17931 250 aaKnown RBP10.5□□□□□ -0.73
SPOCK3-226ENST00000541354 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
SPOCK3-226ENST00000541354 PLAC8L1A1L4L8 177 aa10.5□□□□□ -0.73
SPOCK3-226ENST00000541354 HTN1P15515 57 aa10.5□□□□□ -0.73
SPOCK3-226ENST00000541354 CHCHD7Q9BUK0 85 aa10.5□□□□□ -0.73
SPOCK3-226ENST00000541354 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 UBE2D3P61077 147 aa10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 UBE2D2P62837 147 aa10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 LINC00612Q8N6U2 182 aa10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 Q6ZSN1 163 aa10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 HIVEP1P15822 2718 aa10.49□□□□□ -0.73
SPOCK3-226ENST00000541354 A0A0J9YXV3 536 aa10.48□□□□□ -0.73
SPOCK3-226ENST00000541354 KRTAP24-1Q3LI83 254 aa10.48□□□□□ -0.73
SPOCK3-226ENST00000541354 WFDC10AQ9H1F0 79 aa10.48□□□□□ -0.73
SPOCK3-226ENST00000541354 UBE2D4Q9Y2X8 147 aa10.48□□□□□ -0.73
SPOCK3-226ENST00000541354 A8MZ25 164 aa10.47□□□□□ -0.73
SPOCK3-226ENST00000541354 TSPAN13O95857 204 aa10.47□□□□□ -0.73
SPOCK3-226ENST00000541354 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
SPOCK3-226ENST00000541354 TINCRA0A1B0GVN0 87 aa10.47□□□□□ -0.73
SPOCK3-226ENST00000541354 TIMM21Q9BVV7 248 aa10.47□□□□□ -0.73
SPOCK3-226ENST00000541354 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
SPOCK3-226ENST00000541354 H3BMG7 143 aa10.46□□□□□ -0.73
SPOCK3-226ENST00000541354 PRM2P04554 102 aa10.46□□□□□ -0.73
SPOCK3-226ENST00000541354 CFC1BP0CG36 223 aa10.46□□□□□ -0.73
SPOCK3-226ENST00000541354 CFC1P0CG37 223 aa10.46□□□□□ -0.73
SPOCK3-226ENST00000541354 GAGE13Q4V321 117 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms