RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 IGLV2-18A0A075B6J9 118 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 TRBV27A0A0K0K1C4 114 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 VCYO14598 125 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 IFI27P40305 119 aaPredicted RBP6.44□□□□□ -1.38
DDX55-208ENST00000541259 ESRGQ1W209 222 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 LYPD5Q6UWN5 251 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 NTM-AS1Q6ZSK4 140 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 URB1-AS1Q96HZ7 61 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 MAP1LC3AQ9H492 121 aa6.44□□□□□ -1.38
DDX55-208ENST00000541259 DNAH6Q9C0G6 4158 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 I3L3M4 83 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 TCAPO15273 167 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BKO60814 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 TSHBP01222 138 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BJP06899 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BOP23527 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BBP33778 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BDP58876 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 LINC00310P59036 64 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BCP62807 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 RPL32P62910 135 aaKnown RBP6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST2H2BEQ16778 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.43□□□□□ -1.38
DDX55-208ENST00000541259 CASC10Q5T4H9 136 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 DAZ4Q86SG3 579 aaKnown RBP6.43□□□□□ -1.38
DDX55-208ENST00000541259 Q8N8P6 123 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BHQ93079 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BNQ99877 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 HIST1H2BMQ99879 126 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 GTSF1LQ9H1H1 148 aa6.43□□□□□ -1.38
DDX55-208ENST00000541259 DAZ3Q9NR90 486 aaKnown RBP6.43□□□□□ -1.38
DDX55-208ENST00000541259 C1orf196B1AJZ1 125 aa6.42□□□□□ -1.38
DDX55-208ENST00000541259 C3orf84H3BNL1 204 aa6.42□□□□□ -1.38
DDX55-208ENST00000541259 SH2D6Q7Z4S9 175 aa6.42□□□□□ -1.38
DDX55-208ENST00000541259 NIT1Q86X76 327 aa6.42□□□□□ -1.38
DDX55-208ENST00000541259 PRSS3P2Q8NHM4 247 aa6.42□□□□□ -1.38
DDX55-208ENST00000541259 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
DDX55-208ENST00000541259 Q0VG73 95 aa6.41□□□□□ -1.38
DDX55-208ENST00000541259 COTL1Q14019 142 aa6.41□□□□□ -1.38
DDX55-208ENST00000541259 CHCHD7Q9BUK0 85 aa6.41□□□□□ -1.38
DDX55-208ENST00000541259 NXT2Q9NPJ8 142 aaKnown RBP6.41□□□□□ -1.38
DDX55-208ENST00000541259 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
DDX55-208ENST00000541259 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 NUPR1O60356 82 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
DDX55-208ENST00000541259 FCER1GP30273 86 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 TCTAP57738 103 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 TIRAPP58753 221 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 LELP1Q5T871 98 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 KIR2DL4Q99706 377 aa6.4□□□□□ -1.38
DDX55-208ENST00000541259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.39□□□□□ -1.39
DDX55-208ENST00000541259 IGHV1-24A0A0C4DH33 117 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 IGKV2-29A2NJV5 120 aaPredicted RBP6.39□□□□□ -1.39
DDX55-208ENST00000541259 LINC01546A6NGU7 62 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 LINC00614P0C842 121 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 ESDP10768 282 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 AMTP48728 403 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 CCL18P55774 89 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 NDUFA6P56556 154 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 LAGE3Q14657 143 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 RNASEKQ6P5S7 137 aaKnown RBP6.39□□□□□ -1.39
DDX55-208ENST00000541259 FA2HQ7L5A8 372 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 WFDC10BQ8IUB3 73 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 KMT2AQ03164 3969 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 HYDINQ4G0P3 5121 aa6.39□□□□□ -1.39
DDX55-208ENST00000541259 TRBV25-1A0A075B6N4 114 aa6.38□□□□□ -1.39
DDX55-208ENST00000541259 SERF1AO75920 110 aa6.38□□□□□ -1.39
DDX55-208ENST00000541259 RAB5BP61020 215 aa6.38□□□□□ -1.39
DDX55-208ENST00000541259 RPL39P62891 51 aaKnown RBP6.38□□□□□ -1.39
DDX55-208ENST00000541259 GAGE6Q13070 117 aa6.38□□□□□ -1.39
DDX55-208ENST00000541259 PMCHL1Q16048 86 aa6.38□□□□□ -1.39
DDX55-208ENST00000541259 TMEM97Q5BJF2 176 aa6.38□□□□□ -1.39
DDX55-208ENST00000541259 TMEM243Q9BU79 118 aa6.38□□□□□ -1.39
DDX55-208ENST00000541259 MRPS16Q9Y3D3 137 aaKnown RBP6.38□□□□□ -1.39
DDX55-208ENST00000541259 A0A096LNJ9 63 aa6.37□□□□□ -1.39
DDX55-208ENST00000541259 ORMDL2Q53FV1 153 aa6.37□□□□□ -1.39
DDX55-208ENST00000541259 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
DDX55-208ENST00000541259 C20orf203Q8NBC4 194 aa6.37□□□□□ -1.39
DDX55-208ENST00000541259 CHCHD5Q9BSY4 110 aa6.37□□□□□ -1.39
DDX55-208ENST00000541259 TRAV8-6A0A0B4J262 113 aa6.36□□□□□ -1.39
DDX55-208ENST00000541259 TMEM262E9PQX1 116 aa6.36□□□□□ -1.39
DDX55-208ENST00000541259 K7EMI3 77 aa6.36□□□□□ -1.39
DDX55-208ENST00000541259 BTF3P20290 206 aaKnown RBP6.36□□□□□ -1.39
DDX55-208ENST00000541259 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
DDX55-208ENST00000541259 CHCHD1Q96BP2 118 aaKnown RBP6.36□□□□□ -1.39
DDX55-208ENST00000541259 UBE2L6O14933 153 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 IGHV3-30P01768 117 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 IGHV3-33P01772 117 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 IGHV3-30-3P0DP02 117 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 IGHV3-30-5P0DP03 117 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 FGF6P10767 208 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 MPV17L2Q567V2 206 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 COA6Q5JTJ3 125 aaKnown RBP6.35□□□□□ -1.39
DDX55-208ENST00000541259 C2orf66Q6UXQ4 117 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 UPK3BQ9BT76 320 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
DDX55-208ENST00000541259 DNAH2Q9P225 4427 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms