RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 TGIF2-C20orf24A0A0A6YYL0 155 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 D6R8Y8 96 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 CDK2AP2O75956 126 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 S100A8P05109 93 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 KCNIP4Q6PIL6 250 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 DAZ4Q86SG3 579 aaKnown RBP9.54□□□□□ -0.88
LTBR-209ENST00000541102 DAZ3Q9NR90 486 aaKnown RBP9.54□□□□□ -0.88
LTBR-209ENST00000541102 RYR1P21817 5038 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 SDHAF1A6NFY7 115 aa9.53□□□□□ -0.88
LTBR-209ENST00000541102 YPEL4Q96NS1 127 aa9.53□□□□□ -0.88
LTBR-209ENST00000541102 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 NPYP01303 97 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 S100PP25815 95 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 CKS2P33552 79 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 POLR2KP53803 58 aaKnown RBP9.52□□□□□ -0.89
LTBR-209ENST00000541102 ELOBQ15370 118 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 CBLN2Q8IUK8 224 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 FRZBQ92765 325 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 TMEM70Q9BUB7 260 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 ST20Q9HBF5 79 aa9.52□□□□□ -0.89
LTBR-209ENST00000541102 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
LTBR-209ENST00000541102 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
LTBR-209ENST00000541102 NIT1Q86X76 327 aa9.51□□□□□ -0.89
LTBR-209ENST00000541102 MAPKAPK5-AS1Q8N8E1 139 aa9.51□□□□□ -0.89
LTBR-209ENST00000541102 TSHBP01222 138 aa9.5□□□□□ -0.89
LTBR-209ENST00000541102 KRTAP4-5Q9BYR2 181 aa9.5□□□□□ -0.89
LTBR-209ENST00000541102 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 SUMO2P61956 95 aaKnown RBP9.49□□□□□ -0.89
LTBR-209ENST00000541102 GAGE6Q13070 117 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 COTL1Q14019 142 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 IQCJQ1A5X6 159 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 CHCHD5Q9BSY4 110 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
LTBR-209ENST00000541102 HSPG2P98160 4391 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 IGHV1-24A0A0C4DH33 117 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 LRCOL1A6NCL2 159 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 I3L3M4 83 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 PMCHP20382 165 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 LAGE3Q14657 143 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 MPV17L2Q567V2 206 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
LTBR-209ENST00000541102 TRBV25-1A0A075B6N4 114 aa9.47□□□□□ -0.89
LTBR-209ENST00000541102 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
LTBR-209ENST00000541102 SCO1O75880 301 aa9.47□□□□□ -0.89
LTBR-209ENST00000541102 AMTP48728 403 aa9.47□□□□□ -0.89
LTBR-209ENST00000541102 Q8N976 141 aa9.47□□□□□ -0.89
LTBR-209ENST00000541102 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.47□□□□□ -0.89
LTBR-209ENST00000541102 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
LTBR-209ENST00000541102 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.46□□□□□ -0.9
LTBR-209ENST00000541102 A0A087WX48 190 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 IGKV2-29A2NJV5 120 aaPredicted RBP9.46□□□□□ -0.9
LTBR-209ENST00000541102 TMEM262E9PQX1 116 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 APCSP02743 223 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 PPBPP02775 128 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 TMEM97Q5BJF2 176 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 C20orf78Q9BR46 151 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 KLK12Q9UKR0 248 aa9.46□□□□□ -0.9
LTBR-209ENST00000541102 APOBP04114 4563 aaKnown RBP9.45□□□□□ -0.9
LTBR-209ENST00000541102 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 VCYO14598 125 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 PPP1R17O96001 155 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 HLA-DQA1P01909 254 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 GCSHP23434 173 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 RBX1P62877 108 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 UBE2WQ96B02 151 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
LTBR-209ENST00000541102 MRPL18Q9H0U6 180 aaKnown RBP9.45□□□□□ -0.9
LTBR-209ENST00000541102 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 LOC389332A0A1B0GUA5 103 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 PHOX2AO14813 284 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 LECT2O14960 151 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 TCAPO15273 167 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 ESDP10768 282 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 RPL32P62910 135 aaKnown RBP9.44□□□□□ -0.9
LTBR-209ENST00000541102 Q8N1X5 172 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 Q8N814 137 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 SMCO4Q9NRQ5 59 aa9.44□□□□□ -0.9
LTBR-209ENST00000541102 IGKV2D-24A0A075B6R9 120 aa9.43□□□□□ -0.9
LTBR-209ENST00000541102 WFDC2Q14508 124 aa9.43□□□□□ -0.9
LTBR-209ENST00000541102 BAALCQ8WXS3 180 aa9.43□□□□□ -0.9
LTBR-209ENST00000541102 PCLOQ9Y6V0 5065 aa9.43□□□□□ -0.9
LTBR-209ENST00000541102 FABP9Q0Z7S8 132 aa9.42□□□□□ -0.9
LTBR-209ENST00000541102 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
LTBR-209ENST00000541102 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
LTBR-209ENST00000541102 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
LTBR-209ENST00000541102 RMI2Q96E14 147 aa9.42□□□□□ -0.9
LTBR-209ENST00000541102 ALKBH7Q9BT30 221 aaPredicted RBP9.42□□□□□ -0.9
LTBR-209ENST00000541102 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
LTBR-209ENST00000541102 ANGP03950 147 aaKnown RBP9.41□□□□□ -0.9
LTBR-209ENST00000541102 FCER1GP30273 86 aa9.41□□□□□ -0.9
LTBR-209ENST00000541102 XGP55808 180 aa9.41□□□□□ -0.9
LTBR-209ENST00000541102 COX19Q49B96 90 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms