RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 C20orf203Q8NBC4 194 aa7.62□□□□□ -1.19
CDC42SE1-207ENST00000540998 C9orf85Q96MD7 179 aa7.62□□□□□ -1.19
CDC42SE1-207ENST00000540998 VCX2Q9H322 139 aa7.62□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 A0A0J9YX75 114 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGHV3-30-3P0DP02 117 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 ERG28Q9UKR5 140 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 TRBV20-1A0A075B6N2 111 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 A0A0J9YXY3 114 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 TRIAP1O43715 76 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 CD28P10747 220 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 TCTEX1D4Q5JR98 221 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 ATP6V0E2Q8NHE4 81 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 CLEC2BQ92478 149 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGHV1OR15-1A0A075B7D0 117 aa7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 FN1P02751 2386 aaKnown RBP7.61□□□□□ -1.19
CDC42SE1-207ENST00000540998 ZNF462Q96JM2 2506 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 NBEAL2Q6ZNJ1 2754 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 MTORP42345 2549 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 TRAV4A0A0B4J268 109 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 ID1P41134 155 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 ATP5J2P56134 94 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 LEPROTO15243 131 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-207ENST00000540998 DEFB112Q30KQ8 113 aa7.59□□□□□ -1.19
CDC42SE1-207ENST00000540998 CCL19Q99731 98 aa7.59□□□□□ -1.19
CDC42SE1-207ENST00000540998 SS18L2Q9UHA2 77 aa7.59□□□□□ -1.19
CDC42SE1-207ENST00000540998 I3L3M4 83 aa7.59□□□□□ -1.2
CDC42SE1-207ENST00000540998 PIMREGQ9BSJ6 248 aa7.59□□□□□ -1.2
CDC42SE1-207ENST00000540998 TRBV6-5A0A0K0K1A5 114 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 CFHR3Q02985 330 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 NSUN5P1Q3KNT7 163 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 SBSPONQ8IVN8 264 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 LITAFQ99732 161 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 TIMM21Q9BVV7 248 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 NDUFA7O95182 113 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 PSMB8P28062 276 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 C10orf105Q8TEF2 133 aa7.58□□□□□ -1.2
CDC42SE1-207ENST00000540998 K7EQG2 157 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 SNRPD3P62318 126 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 RPL32P62910 135 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 LINC01620Q4KN68 170 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 M0R2P5 195 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 MSMBP08118 114 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 LYRM7Q5U5X0 104 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 ACANP16112 2415 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 RBMY1BA6NDE4 496 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 RBMY1EA6NEQ0 496 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 RBMY1DP0C7P1 496 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 SLURP1P55000 103 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 DEFB131AP59861 70 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
CDC42SE1-207ENST00000540998 TTC32Q5I0X7 151 aa7.56□□□□□ -1.2
CDC42SE1-207ENST00000540998 LINC00467Q9BRT7 94 aa7.56□□□□□ -1.2
CDC42SE1-207ENST00000540998 B5MCH6 92 aa7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 HOXD3P31249 432 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 RHOHQ15669 191 aa7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 GCN1Q92616 2671 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 TRBV7-9A0A0J9YWB2 115 aa7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 C3orf56Q8N813 242 aa7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 ZFAND6Q6FIF0 208 aa7.55□□□□□ -1.2
CDC42SE1-207ENST00000540998 H3BUA1 57 aa7.54□□□□□ -1.2
CDC42SE1-207ENST00000540998 TEX29Q8N6K0 151 aa7.54□□□□□ -1.2
CDC42SE1-207ENST00000540998 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
CDC42SE1-207ENST00000540998 A0A0B4J2C4 111 aa7.54□□□□□ -1.2
CDC42SE1-207ENST00000540998 TNFRSF18Q9Y5U5 241 aa7.54□□□□□ -1.2
CDC42SE1-207ENST00000540998 H7C423 109 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 K7EMT4 169 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 COX6A2Q02221 97 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 ODF3Q96PU9 254 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 CITED1Q99966 193 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 ICOSQ9Y6W8 199 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 CCDC179H3BU77 68 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 KHDC1LQ5JSQ8 128 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 C2orf82Q6UX34 121 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
CDC42SE1-207ENST00000540998 BRI3O95415 125 aa7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 IGHV3-53P01767 116 aa7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 UCNP55089 124 aa7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 C11orf44Q8N8P7 122 aa7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 SNCGO76070 127 aa7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 MRPS36P82909 103 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 C15orf53Q8NAA6 179 aa7.52□□□□□ -1.21
CDC42SE1-207ENST00000540998 IGHV1-58A0A0C4DH39 117 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 VSIG2Q96IQ7 327 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 FLNAP21333 2647 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 TMEM61Q8N0U2 210 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 ITPR3Q14573 2671 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 H3BMM0 161 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms