RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 A0A1W2PPM0 123 aa10.54□□□□□ -0.72
USP3-204ENST00000540797 NDUFA7O95182 113 aa10.54□□□□□ -0.72
USP3-204ENST00000540797 IGLC6P0CF74 106 aa10.54□□□□□ -0.72
USP3-204ENST00000540797 Q6ZUT4 128 aa10.54□□□□□ -0.72
USP3-204ENST00000540797 LINC00269Q8N2A0 174 aa10.54□□□□□ -0.72
USP3-204ENST00000540797 DAND5Q8N907 189 aa10.54□□□□□ -0.72
USP3-204ENST00000540797 Q6ZVH6 145 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 NCR3O14931 201 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 PPDPFLQ8WWR9 84 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 C11orf86A6NJI1 115 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 MLST8Q9BVC4 326 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 CRYGDP07320 174 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 REG3AQ06141 175 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
USP3-204ENST00000540797 C15orf53Q8NAA6 179 aa10.52□□□□□ -0.72
USP3-204ENST00000540797 K7EP34 96 aa10.52□□□□□ -0.73
USP3-204ENST00000540797 F8W1H4 67 aa10.52□□□□□ -0.73
USP3-204ENST00000540797 HIGD2BQ4VC39 106 aa10.52□□□□□ -0.73
USP3-204ENST00000540797 ETDBQ3ZM63 59 aa10.52□□□□□ -0.73
USP3-204ENST00000540797 WFDC10AQ9H1F0 79 aa10.52□□□□□ -0.73
USP3-204ENST00000540797 CEP295Q9C0D2 2601 aa10.51□□□□□ -0.73
USP3-204ENST00000540797 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
USP3-204ENST00000540797 H3BMG7 143 aa10.51□□□□□ -0.73
USP3-204ENST00000540797 BAALC-AS2P0C853 105 aa10.51□□□□□ -0.73
USP3-204ENST00000540797 A4D1N5 150 aa10.51□□□□□ -0.73
USP3-204ENST00000540797 BBC3Q96PG8 261 aaPredicted RBP10.51□□□□□ -0.73
USP3-204ENST00000540797 TRAV10A0A0B4J240 114 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 IGHV1-58A0A0C4DH39 117 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 H0YGX0 51 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 E9PLD3 99 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 KIAA1549Q9HCM3 1950 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
USP3-204ENST00000540797 IGKV2-24A0A0C4DH68 120 aa10.49□□□□□ -0.73
USP3-204ENST00000540797 MIR7-3HGQ8N6C7 128 aa10.49□□□□□ -0.73
USP3-204ENST00000540797 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
USP3-204ENST00000540797 PRB2P02812 416 aaPredicted RBP10.48□□□□□ -0.73
USP3-204ENST00000540797 TTTY13Q9BZ97 58 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 ODF1Q14990 250 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 WDR87Q6ZQQ6 2873 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 KIR2DL5BA0A0G2JN68 375 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 KIR2DL5BA0A0G2JPC4 375 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 TRBV6-4A0A1B0GX49 114 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 KIR2DL5AQ8N109 375 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 KIR2DL5BQ8NHK3 375 aa10.48□□□□□ -0.73
USP3-204ENST00000540797 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
USP3-204ENST00000540797 FUSP35637 526 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP3-204ENST00000540797 CHCHD10Q8WYQ3 142 aaPredicted RBP10.47□□□□□ -0.73
USP3-204ENST00000540797 RS1O15537 224 aa10.47□□□□□ -0.73
USP3-204ENST00000540797 ARHGAP32A7KAX9 2087 aa10.47□□□□□ -0.73
USP3-204ENST00000540797 MYO9AB2RTY4 2548 aa10.47□□□□□ -0.73
USP3-204ENST00000540797 PLXNB1O43157 2135 aa10.46□□□□□ -0.73
USP3-204ENST00000540797 ANKRD11Q6UB99 2663 aaPredicted RBP10.46□□□□□ -0.73
USP3-204ENST00000540797 H7C423 109 aa10.46□□□□□ -0.73
USP3-204ENST00000540797 CRIP1P50238 77 aa10.46□□□□□ -0.73
USP3-204ENST00000540797 NTN5Q8WTR8 489 aaPredicted RBP10.46□□□□□ -0.73
USP3-204ENST00000540797 TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
USP3-204ENST00000540797 DIRC1Q969H9 104 aa10.45□□□□□ -0.74
USP3-204ENST00000540797 K7EP13 123 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 NDUFS5O43920 106 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 PROK1P58294 105 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 M0QY20 66 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 JMJD1CQ15652 2540 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 UFSP1Q6NVU6 142 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 DCANP1Q8TF63 244 aa10.44□□□□□ -0.74
USP3-204ENST00000540797 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
USP3-204ENST00000540797 TDRG1Q3Y452 100 aa10.43□□□□□ -0.74
USP3-204ENST00000540797 KPRPQ5T749 579 aaPredicted RBP10.42□□□□□ -0.74
USP3-204ENST00000540797 NFE4Q86UQ8 179 aa10.42□□□□□ -0.74
USP3-204ENST00000540797 HIGD1BQ9P298 99 aa10.42□□□□□ -0.74
USP3-204ENST00000540797 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
USP3-204ENST00000540797 KLLNB2CW77 178 aa10.41□□□□□ -0.74
USP3-204ENST00000540797 IGLV2-18A0A075B6J9 118 aa10.4□□□□□ -0.74
USP3-204ENST00000540797 PRR9Q5T870 116 aa10.4□□□□□ -0.74
USP3-204ENST00000540797 Q8N976 141 aa10.4□□□□□ -0.74
USP3-204ENST00000540797 CHD8Q9HCK8 2581 aa10.4□□□□□ -0.74
USP3-204ENST00000540797 H3BQ85 93 aa10.4□□□□□ -0.74
USP3-204ENST00000540797 FXYD2P54710 66 aa10.4□□□□□ -0.74
USP3-204ENST00000540797 B9D2Q9BPU9 175 aa10.4□□□□□ -0.74
USP3-204ENST00000540797 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 LECT2O14960 151 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 TRACP01848 142 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 RNASE3P12724 160 aaKnown RBP10.39□□□□□ -0.75
USP3-204ENST00000540797 C16orf95Q9H693 158 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 SPTBN4Q9H254 2564 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 PRM2P04554 102 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 CRIP2P52943 208 aaPredicted RBP10.39□□□□□ -0.75
USP3-204ENST00000540797 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.39□□□□□ -0.75
USP3-204ENST00000540797 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
USP3-204ENST00000540797 A0A0J9YWU9 116 aa10.38□□□□□ -0.75
USP3-204ENST00000540797 EDN2P20800 178 aa10.38□□□□□ -0.75
USP3-204ENST00000540797 ANKRD29Q8N6D5 301 aa10.38□□□□□ -0.75
USP3-204ENST00000540797 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
USP3-204ENST00000540797 M0R2N4 97 aa10.37□□□□□ -0.75
USP3-204ENST00000540797 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms