RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 LELP1Q5T871 98 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 GOLT1AQ6ZVE7 132 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 Q8N3U1 123 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 SYT8Q8NBV8 401 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 OR4C5Q8NGB2 326 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 KCNS1Q96KK3 526 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 C2orf88Q9BSF0 95 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 GFRA4Q9GZZ7 299 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 ZFP30Q9Y2G7 519 aa4.8□□□□□ -1.64
YBX3-209ENST00000540747 TRAV8-6A0A0B4J262 113 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 A0A1B0GV90 55 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 FAM231BA6NCW3 169 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 HIGD1CA8MV81 97 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 F2Z2F3 143 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 GNRH2O43555 120 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 HSBP1O75506 76 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 RAB4AP20338 218 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 SSTP61278 116 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 HBBP68871 147 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 RIGQ13278 110 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 TEX43Q6ZNM6 134 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 SLC25A29Q8N8R3 303 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 OR2D3Q8NGH3 330 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 PGLYRP4Q96LB8 373 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 MIEN1Q9BRT3 115 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 CHAC1Q9BUX1 264 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 MLST8Q9BVC4 326 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 PLA2G2DQ9UNK4 145 aa4.79□□□□□ -1.64
YBX3-209ENST00000540747 SERTM2A0A1B0GWG4 89 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 TRBV6-4A0A1B0GX49 114 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 C19orf71A6NCJ1 209 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 RS1O15537 224 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 IGHV3-30P01768 117 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 IGHV3-33P01772 117 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 IGHV3-30-3P0DP02 117 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 IGHV3-30-5P0DP03 117 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 LINC00310P59036 64 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 CFAP126Q5VTH2 177 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 RNASEKQ6P5S7 137 aaKnown RBP4.78□□□□□ -1.64
YBX3-209ENST00000540747 FAM159AQ6UWV7 190 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 Q86TA4 180 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 MRPL52Q86TS9 123 aaKnown RBP4.78□□□□□ -1.64
YBX3-209ENST00000540747 NIT1Q86X76 327 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 LINC00469Q8N7U9 141 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 TMEM75Q8N9X5 138 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 CIRBP-AS1Q8TBR5 109 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 C18orf32Q8TCD1 76 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 ALKBH7Q9BT30 221 aaPredicted RBP4.78□□□□□ -1.64
YBX3-209ENST00000540747 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 GTSF1LQ9H1H1 148 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 PSG8Q9UQ74 426 aa4.78□□□□□ -1.64
YBX3-209ENST00000540747 A0A1B0GW15 77 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 A0A1B0GXF2 115 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 FBLL1A6NHQ2 334 aaKnown RBP4.77□□□□□ -1.65
YBX3-209ENST00000540747 LECT2O14960 151 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
YBX3-209ENST00000540747 RHOHQ15669 191 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 PMCHL1Q16048 86 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 FAM19A2Q8N3H0 131 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 PTH2Q96A98 100 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 C9orf85Q96MD7 179 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 SSBP4Q9BWG4 385 aaPredicted RBP4.77□□□□□ -1.65
YBX3-209ENST00000540747 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 PAM16Q9Y3D7 125 aa4.77□□□□□ -1.65
YBX3-209ENST00000540747 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.76□□□□□ -1.65
YBX3-209ENST00000540747 TRAV8-3A0A0A6YYJ7 113 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 TRAV21A0A0B4J279 112 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 A0A1B0GUT8 65 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 C20orf202A1L168 122 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 CIDEAO60543 219 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 OR5AL1P0C617 328 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 C3orf79P0CE67 100 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 RPS20P60866 119 aaKnown RBP4.76□□□□□ -1.65
YBX3-209ENST00000540747 SPATA45Q537H7 98 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 SAPCD1Q5SSQ6 148 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 DAZ4Q86SG3 579 aaKnown RBP4.76□□□□□ -1.65
YBX3-209ENST00000540747 ARL6IP6Q8N6S5 226 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 ATP6V0E2Q8NHE4 81 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 CHCHD1Q96BP2 118 aaKnown RBP4.76□□□□□ -1.65
YBX3-209ENST00000540747 PRADC1Q9BSG0 188 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 NDFIP1Q9BT67 221 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 DAZ3Q9NR90 486 aaKnown RBP4.76□□□□□ -1.65
YBX3-209ENST00000540747 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
YBX3-209ENST00000540747 TRAV8-1A0A0A6YYK1 113 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 TCAPO15273 167 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 IGLV2-11P01706 119 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 LINC00614P0C842 121 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 FOXA3P55318 350 aaPredicted RBP4.75□□□□□ -1.65
YBX3-209ENST00000540747 ZNF876PQ49A33 203 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 DMRTA1Q5VZB9 504 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 GTSF1Q8WW33 167 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 BAALCQ8WXS3 180 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 DNAJC30Q96LL9 226 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 SNHG12Q9BXW3 62 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 Q9UF83 564 aa4.75□□□□□ -1.65
YBX3-209ENST00000540747 RNASE3P12724 160 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms