RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 A0A1B0GWB2 263 aa15.17■□□□□ 0.02
LSM14A-202ENST00000540746 BEAN1Q3B7T3 259 aa15.17■□□□□ 0.02
LSM14A-202ENST00000540746 C1orf158Q8N1D5 194 aa15.16■□□□□ 0.02
LSM14A-202ENST00000540746 AMELXQ99217 191 aa15.16■□□□□ 0.02
LSM14A-202ENST00000540746 FASNP49327 2511 aaKnown RBP15.16■□□□□ 0.02
LSM14A-202ENST00000540746 CEMP1Q6PRD7 247 aaPredicted RBP15.15■□□□□ 0.02
LSM14A-202ENST00000540746 STHQ8IWL8 128 aa15.15■□□□□ 0.02
LSM14A-202ENST00000540746 A0A0J9YY99 117 aa15.15■□□□□ 0.02
LSM14A-202ENST00000540746 RNASE1P07998 156 aaKnown RBP15.15■□□□□ 0.02
LSM14A-202ENST00000540746 OR5A1Q8NGJ0 315 aa15.15■□□□□ 0.02
LSM14A-202ENST00000540746 SPXQ9BT56 116 aa15.15■□□□□ 0.02
LSM14A-202ENST00000540746 VCX2Q9H322 139 aa15.14■□□□□ 0.01
LSM14A-202ENST00000540746 TSSC4Q9Y5U2 329 aaPredicted RBP15.14■□□□□ 0.01
LSM14A-202ENST00000540746 IGHV3OR16-12A0A075B7B8 117 aa15.14■□□□□ 0.01
LSM14A-202ENST00000540746 A0A0J9YXV3 536 aa15.14■□□□□ 0.01
LSM14A-202ENST00000540746 C16orf95Q9H693 158 aa15.14■□□□□ 0.01
LSM14A-202ENST00000540746 PYGO1Q9Y3Y4 419 aa15.14■□□□□ 0.01
LSM14A-202ENST00000540746 TMEM223A0PJW6 202 aa15.13■□□□□ 0.01
LSM14A-202ENST00000540746 IGHV3-53P01767 116 aa15.13■□□□□ 0.01
LSM14A-202ENST00000540746 ZNF22P17026 224 aaPredicted RBP15.13■□□□□ 0.01
LSM14A-202ENST00000540746 J3QQQ9 107 aa15.12■□□□□ 0.01
LSM14A-202ENST00000540746 RS1O15537 224 aa15.12■□□□□ 0.01
LSM14A-202ENST00000540746 ZNF479Q96JC4 524 aa15.12■□□□□ 0.01
LSM14A-202ENST00000540746 CHCHD7Q9BUK0 85 aa15.12■□□□□ 0.01
LSM14A-202ENST00000540746 J3QKU1 62 aa15.12■□□□□ 0.01
LSM14A-202ENST00000540746 SRSF9Q13242 221 aaKnown RBP eCLIP15.12■□□□□ 0.01
LSM14A-202ENST00000540746 RHODO00212 210 aa15.11■□□□□ 0.01
LSM14A-202ENST00000540746 IL17DQ8TAD2 202 aa15.11■□□□□ 0.01
LSM14A-202ENST00000540746 CBY1Q9Y3M2 126 aa15.11■□□□□ 0.01
LSM14A-202ENST00000540746 RNASE13Q5GAN3 156 aaKnown RBP15.1■□□□□ 0.01
LSM14A-202ENST00000540746 IGHV3-38A0A0C4DH36 116 aa15.09■□□□□ 0.01
LSM14A-202ENST00000540746 SAP30O75446 220 aa15.09■□□□□ 0.01
LSM14A-202ENST00000540746 RNF151Q2KHN1 245 aa15.09■□□□□ 0.01
LSM14A-202ENST00000540746 RRN3P1Q2M238 152 aa15.09■□□□□ 0.01
LSM14A-202ENST00000540746 GCN1Q92616 2671 aaKnown RBP15.09■□□□□ 0.01
LSM14A-202ENST00000540746 IGHV3-64A0A075B6Q5 118 aa15.09■□□□□ 0.01
LSM14A-202ENST00000540746 SLC25A29Q8N8R3 303 aa15.08■□□□□ 0.01
LSM14A-202ENST00000540746 LEPROTO15243 131 aa15.08■□□□□ 0
LSM14A-202ENST00000540746 LGALS3P17931 250 aaKnown RBP15.08■□□□□ 0
LSM14A-202ENST00000540746 UBE2D1P51668 147 aa15.08■□□□□ 0
LSM14A-202ENST00000540746 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.07■□□□□ 0
LSM14A-202ENST00000540746 IGKV2-29A2NJV5 120 aaPredicted RBP15.07■□□□□ 0
LSM14A-202ENST00000540746 WFDC10AQ9H1F0 79 aa15.07■□□□□ 0
LSM14A-202ENST00000540746 UBE2D4Q9Y2X8 147 aa15.07■□□□□ 0
LSM14A-202ENST00000540746 ADARB2-AS1A8MUL3 147 aa15.07■□□□□ 0
LSM14A-202ENST00000540746 GIG44P09565 113 aaPredicted RBP15.07■□□□□ 0
LSM14A-202ENST00000540746 MRPS36P82909 103 aaKnown RBP15.06■□□□□ 0
LSM14A-202ENST00000540746 DNAJC30Q96LL9 226 aa15.06■□□□□ 0
LSM14A-202ENST00000540746 SPANXB1Q9NS25 103 aaPredicted RBP15.06■□□□□ 0
LSM14A-202ENST00000540746 HECTD1Q9ULT8 2610 aa15.06■□□□□ 0
LSM14A-202ENST00000540746 TRGV1A0A0A0MS02 117 aa15.05■□□□□ 0
LSM14A-202ENST00000540746 IGHV3-30P01768 117 aa15.05■□□□□ 0
LSM14A-202ENST00000540746 IGHV3-30-5P0DP03 117 aa15.05■□□□□ 0
LSM14A-202ENST00000540746 HIVEP2P31629 2446 aa15.05■□□□□ -0
LSM14A-202ENST00000540746 CRYBA4P53673 196 aa15.05■□□□□ -0
LSM14A-202ENST00000540746 C2CD3Q4AC94 2353 aa15.05■□□□□ -0
LSM14A-202ENST00000540746 TMEM238LA0A1B0GVL6 79 aa15.04■□□□□ -0
LSM14A-202ENST00000540746 A6NJY4 79 aa15.04■□□□□ -0
LSM14A-202ENST00000540746 Q6ZTI0 123 aa15.04■□□□□ -0
LSM14A-202ENST00000540746 SMR3AQ99954 134 aa15.04■□□□□ -0
LSM14A-202ENST00000540746 PGPEP1Q9NXJ5 209 aa15.04■□□□□ -0
LSM14A-202ENST00000540746 HILS1P60008 231 aa15.04■□□□□ -0
LSM14A-202ENST00000540746 SPANXA1Q9NS26 97 aa15.04■□□□□ -0
LSM14A-202ENST00000540746 K7ERU9 68 aa15.03■□□□□ -0
LSM14A-202ENST00000540746 IGLV1-51P01701 117 aa15.03■□□□□ -0
LSM14A-202ENST00000540746 C19orf73Q9NVV2 129 aa15.03■□□□□ -0
LSM14A-202ENST00000540746 COTL1Q14019 142 aa15.02■□□□□ -0
LSM14A-202ENST00000540746 Q6ZUT4 128 aa15.02■□□□□ -0
LSM14A-202ENST00000540746 H3BMG7 143 aa15.02□□□□□ -0.01
LSM14A-202ENST00000540746 TMEM263Q8WUH6 116 aaKnown RBP15.02□□□□□ -0.01
LSM14A-202ENST00000540746 C10orf126Q8N4M7 172 aa15.01□□□□□ -0.01
LSM14A-202ENST00000540746 TRAV8-3A0A0A6YYJ7 113 aa15.01□□□□□ -0.01
LSM14A-202ENST00000540746 APOMO95445 188 aa15.01□□□□□ -0.01
LSM14A-202ENST00000540746 IGHV3-30-3P0DP02 117 aa15.01□□□□□ -0.01
LSM14A-202ENST00000540746 ZNF418Q8TF45 676 aaPredicted RBP15.01□□□□□ -0.01
LSM14A-202ENST00000540746 NDUFA11Q86Y39 141 aa15□□□□□ -0.01
LSM14A-202ENST00000540746 NOTCH2Q04721 2471 aa15□□□□□ -0.01
LSM14A-202ENST00000540746 TSPAN13O95857 204 aa15□□□□□ -0.01
LSM14A-202ENST00000540746 CFC1BP0CG36 223 aa14.99□□□□□ -0.01
LSM14A-202ENST00000540746 CFC1P0CG37 223 aa14.99□□□□□ -0.01
LSM14A-202ENST00000540746 PLAC8L1A1L4L8 177 aa14.98□□□□□ -0.01
LSM14A-202ENST00000540746 RPL35AP18077 110 aaKnown RBP14.98□□□□□ -0.01
LSM14A-202ENST00000540746 TIMM21Q9BVV7 248 aa14.98□□□□□ -0.01
LSM14A-202ENST00000540746 TINCRA0A1B0GVN0 87 aa14.98□□□□□ -0.01
LSM14A-202ENST00000540746 NOP10Q9NPE3 64 aaKnown RBP14.98□□□□□ -0.01
LSM14A-202ENST00000540746 WFDC2Q14508 124 aa14.97□□□□□ -0.01
LSM14A-202ENST00000540746 VPS25Q9BRG1 176 aa14.97□□□□□ -0.01
LSM14A-202ENST00000540746 VWFP04275 2813 aa14.97□□□□□ -0.01
LSM14A-202ENST00000540746 SFTA2Q6UW10 78 aa14.97□□□□□ -0.01
LSM14A-202ENST00000540746 OTOGQ6ZRI0 2925 aa14.96□□□□□ -0.01
LSM14A-202ENST00000540746 G3V4G9 280 aa14.96□□□□□ -0.01
LSM14A-202ENST00000540746 NDUFA7O95182 113 aa14.96□□□□□ -0.01
LSM14A-202ENST00000540746 CMC4P56277 68 aaPredicted RBP14.96□□□□□ -0.01
LSM14A-202ENST00000540746 KRTAP10-3P60369 221 aa14.96□□□□□ -0.01
LSM14A-202ENST00000540746 FAM110AQ9BQ89 295 aa14.96□□□□□ -0.01
LSM14A-202ENST00000540746 A0A0J9YXY3 114 aa14.95□□□□□ -0.02
LSM14A-202ENST00000540746 A8MZ25 164 aa14.95□□□□□ -0.02
LSM14A-202ENST00000540746 TRAV4A0A0B4J268 109 aa14.95□□□□□ -0.02
LSM14A-202ENST00000540746 IGHV1-58A0A0C4DH39 117 aa14.95□□□□□ -0.02
LSM14A-202ENST00000540746 K7EQD1 137 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms